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Lsi07G013070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptiontRNA_edit domain-containing protein
Genome locationchr07:19102332..19103793
RNA-Seq ExpressionLsi07G013070
SyntenyLsi07G013070
Gene Ontology termsGO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW82255.1 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein [Tanacetum cinerariifolium]1.1e-1097.22Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINF
        VILDEAIVKLNPD+FWLGGGEIDLKLGIRTSEFINF
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINF
XP_008448863.1 PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo]3.0e-1197.3Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINF+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
XP_017220484.1 PREDICTED: uncharacterized protein LOC108197387 [Daucus carota subsp. sativus]6.6e-1186.05Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFLGGPVFS
        VILDEAIVKLNPD+FWLGGGEIDLKLGIRTSEFIN+L   V S
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFLGGPVFS
XP_022735982.1 uncharacterized protein LOC111289308 [Durio zibethinus]5.0e-1194.59Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPD+FWLGGGE+DLKLGIRTSEFINFL
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
XP_038903466.1 uncharacterized protein LOC120090048 [Benincasa hispida]3.0e-1197.3Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINF+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
TrEMBL top hitse value%identityAlignment
A0A175YM46 tRNA_edit domain-containing protein3.2e-1186.05Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFLGGPVFS
        VILDEAIVKLNPD+FWLGGGEIDLKLGIRTSEFIN+L   V S
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFLGGPVFS
A0A1S3BLB4 uncharacterized protein LOC1034908951.4e-1197.3Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINF+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
A0A5B6YZ57 tRNA_edit domain-containing protein (Fragment)4.2e-1194.59Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPD+FWLGGGEIDLKLGIRTSEFINF+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
A0A6J1DMB4 uncharacterized protein LOC1110213535.4e-1191.89Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAI KLNPDYFWLGGGEIDLKLGIRTSEF+NF+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
A0A6P5Y6C2 uncharacterized protein LOC1112893082.4e-1194.59Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAIVKLNPD+FWLGGGE+DLKLGIRTSEFINFL
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain1.3e-1281.08Show/hide
Query:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL
        VILDEAI KL PD+FWLGGGEIDLKLG+RTSEF+ F+
Subjt:  VILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTATGTTGTGGTCCACTATTGCTTTTGCATAGACCAATGATTCTCTGCCAGTCTGCCATAACTGAAAAATATCGTAAAACTAAAAGCTGTTTCGTTTGCCAGCA
AAAGCGTGTGCTCGAACACAAAATGGTGATTTTGGATGAAGCGATTGTGAAACTAAATCCTGATTATTTTTGGTTGGGCGGTGGGGAAATCGACCTGAAGTTGGGGATCA
GGACATCTGAGTTCATAAACTTTTTAGGAGGACCCGTTTTCAGCCGGTTCACACCACCCAAGCTCGACAACAAATCAACTCAACAGACTAATACTACAAGGATCCAGGAA
ACACATGCAGAATTTGTTGTTCAAAATGGAACAACTTTGGAATTCATGTACGTAGAAGCAAGAACAAGCAGTGGTCTTATCAAAGCGATTGGCAGTGGCTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTATGTTGTGGTCCACTATTGCTTTTGCATAGACCAATGATTCTCTGCCAGTCTGCCATAACTGAAAAATATCGTAAAACTAAAAGCTGTTTCGTTTGCCAGCA
AAAGCGTGTGCTCGAACACAAAATGGTGATTTTGGATGAAGCGATTGTGAAACTAAATCCTGATTATTTTTGGTTGGGCGGTGGGGAAATCGACCTGAAGTTGGGGATCA
GGACATCTGAGTTCATAAACTTTTTAGGAGGACCCGTTTTCAGCCGGTTCACACCACCCAAGCTCGACAACAAATCAACTCAACAGACTAATACTACAAGGATCCAGGAA
ACACATGCAGAATTTGTTGTTCAAAATGGAACAACTTTGGAATTCATGTACGTAGAAGCAAGAACAAGCAGTGGTCTTATCAAAGCGATTGGCAGTGGCTTTTTGTGA
Protein sequenceShow/hide protein sequence
MIVCCGPLLLLHRPMILCQSAITEKYRKTKSCFVCQQKRVLEHKMVILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFLGGPVFSRFTPPKLDNKSTQQTNTTRIQE
THAEFVVQNGTTLEFMYVEARTSSGLIKAIGSGFL