; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome locationchr07:19149419..19155676
RNA-Seq ExpressionLsi07G013110
SyntenyLsi07G013110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]3.0e-6184.51Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]2.0e-6083.8Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KAS+IPF               APKVYPYDNLRVELGGE EA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]5.2e-6185.21Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
XP_023005602.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima]2.0e-6083.8Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KAS+IPF               APKVYPYDNLRVELGGE EA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]6.1e-6285.92Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNL S+ILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
TrEMBL top hitse value%identityAlignment
A0A0A0L5J8 Uncharacterized protein1.5e-6184.51Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial1.5e-6184.51Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
A0A6J1GGJ2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like9.6e-6183.8Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KAS+IPF               APKVYPYDNLRVELGGE EA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial2.5e-6185.21Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KASKIPF               APKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like9.6e-6183.8Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
        KAS+IPF               APKVYPYDNLRVELGGE EA
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEPEA
SwissProt top hitse value%identityAlignment
Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial4.9e-5473.57Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEP
        KASK+PF                P+VYPYDNLRVELGGEP
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEP
Arabidopsis top hitse value%identityAlignment
AT5G47570.1 unknown protein3.5e-5573.57Show/hide
Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEP
        KASK+PF                P+VYPYDNLRVELGGEP
Subjt:  KASKIPFVSILNCTSVADLLYYAPKVYPYDNLRVELGGEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGT
CGGCAGACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTG
GGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATA
CTGAACTGCACATCTGTTGCGGATCTTTTGTACTACGCGCCAAAAGTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ACCATTATTTTGCCCCATTGCTCTGATTGTTCTGAAGAACAAGAACTCAAAAGGAGGAACAGACGACGATTTGGGAATTTTGAAGAGGGAAAACCACCGAAAATGGCAGG
CAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGTCGGCAGAC
ACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTGGGAAGTAC
GAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATACTGAACTG
CACATCTGTTGCGGATCTTTTGTACTACGCGCCAAAAGTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGATAGACCTCACGTCC
AATGACCATTTTGGTACTGTTTCTTTTCAGACACAAAAATCCTTTGTTGAATTGTTTGCCTTTGGAATTTGCTATGCATCAAAATAATGGATTTTGTTGCCTGTACTGAA
ATCTCTCTTTGGCATTGTGTAAATCAATTCTATATTATGATTTTTATAATGAGGTTCTGAAGACTTTTTGCCATCAATTCTAAAATAATGAATGAATGTTTCAATAAGTT
TGTTATTTTGAGATGGGATGGGGAGTTCTATGAAATCCAGTGTTACTCTTCAAATGAACTCTACTGTTTAACAATGCCTCAATTTCTCGTTTCTCCTTTATATGTGATTT
TTATTTATTAGTAATATGAATATAATTCTATTGCGGTTTATTA
Protein sequenceShow/hide protein sequence
MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSI
LNCTSVADLLYYAPKVYPYDNLRVELGGEPEA