; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich domain-containing protein 1-like
Genome locationchr07:19429872..19432372
RNA-Seq ExpressionLsi07G013250
SyntenyLsi07G013250
Gene Ontology termsNA
InterPro domainsIPR009836 - Glycine-rich domain-containing protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577614.1 Glycine-rich domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4257.61Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEWA+AQ+IEIGVDLVA AKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNV+ST  + SSCL+E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

KAG6577619.1 Glycine-rich domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]5.5e-4256.67Show/hide
Query:  NKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL----------------------------
        N+ELEWA+AQ+IE+GVDLVA AKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                            
Subjt:  NKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL----------------------------

Query:  --ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
          ILDNSNV+ST  + SSCL+E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  --ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

XP_008448876.1 PREDICTED: glycine-rich domain-containing protein 1-like [Cucumis melo]1.1e-4257.53Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEW +AQ+IEIGVDLVAAAKRQLQFLS V+ NR++              AYWLPL+AKHSESPLF+GPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQED---DVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNVIST  I SSC +E++KVWNELYP+E F+FNFNF+S  D   D+ + LS L+KYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQED---DVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

XP_023552041.1 glycine-rich domain-containing protein 1-like [Cucurbita pepo subsp. pepo]1.9e-4257.61Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEWA+AQ+IEIGVDLVAAAKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNV+ST  + SSCL+E+++VWNELYP+E F+FNFN   + ++D  K LS L+KYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

XP_038876850.1 uncharacterized protein LOC120069217 [Benincasa hispida]3.1e-4561.41Show/hide
Query:  KNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDS--------------NRYIAYWLPLVAKHSESPLFEGPL--------------------------
        + NKELEW KAQKIEIGVDLVAAAK QLQFLS VDS               RY AYWLPL+AKHSESPLFEGPL                          
Subjt:  KNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDS--------------NRYIAYWLPLVAKHSESPLFEGPL--------------------------

Query:  ----ILDNSNVISTTIIESSCL-KESQKVWNELYPQEAFSFNFNFNSQEDDVPK--ELSQLEKYTKYDLVSAVKRQSPFFFQVS
            ILDNSNVISTT++ES CL KE++ +WNELYP+E FS  FNFNSQE DVPK  +LSQLEKYTKYDLV AVKRQ+PFF+QVS
Subjt:  ----ILDNSNVISTTIIESSCL-KESQKVWNELYPQEAFSFNFNFNSQEDDVPK--ELSQLEKYTKYDLVSAVKRQSPFFFQVS

TrEMBL top hitse value%identityAlignment
A0A1S3BLM1 glycine-rich domain-containing protein 1-like5.4e-4357.53Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEW +AQ+IEIGVDLVAAAKRQLQFLS V+ NR++              AYWLPL+AKHSESPLF+GPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQED---DVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNVIST  I SSC +E++KVWNELYP+E F+FNFNF+S  D   D+ + LS L+KYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQED---DVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

A0A6J1E6D0 glycine-rich domain-containing protein 2-like isoform X22.7e-4256.67Show/hide
Query:  NKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL----------------------------
        N+ELEWA+AQ+IE+GVDLVA AKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                            
Subjt:  NKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL----------------------------

Query:  --ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
          ILDNSNV+ST  + SSCL+E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  --ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

A0A6J1KZD5 glycine-rich domain-containing protein 1-like isoform X12.7e-4257.61Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEWA+AQ+IEIGVDLVAAAKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNV+ST  + SSC +E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

A0A6J1L3N7 glycine-rich domain-containing protein 1-like isoform X32.7e-4257.61Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEWA+AQ+IEIGVDLVAAAKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNV+ST  + SSC +E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

A0A6J1L8C3 glycine-rich domain-containing protein 1-like isoform X22.7e-4257.61Show/hide
Query:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------
        MEK N+ELEWA+AQ+IEIGVDLVAAAKRQLQFLS VD NR++              AYWLPL+AKHSESPLFEGPL                        
Subjt:  MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYI--------------AYWLPLVAKHSESPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              ILDNSNV+ST  + SSC +E+++VWNELYP+E F+FNFN   + ++D  K LS LEKYTKYDLVSAVKRQSPFF+QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQ-EDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

SwissProt top hitse value%identityAlignment
Q9SZJ2 Glycine-rich domain-containing protein 27.0e-2439.46Show/hide
Query:  MEKNNKE-LEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL----------------------
        M+K  ++ LEW +AQKI+I VDL+AAAK+ L FL  VD N              RY AYWLPL+A+++E S + +GPL                      
Subjt:  MEKNNKE-LEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL----------------------

Query:  --------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
                +LDNS V+S+  +  +C  +++ +W  LYP E +  +F     E   P ++S LEK T YDLV AVKRQSPFF+QVS
Subjt:  --------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

Q9ZQ47 Glycine-rich domain-containing protein 18.3e-2539.89Show/hide
Query:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------
        ++ + E+EW +AQKIEI VDL+AAAK+ L FL TVD N              RY A WLPL+ K+SE S + EG L                        
Subjt:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              +LDNS V+S+  ++ +C  +++ +W  LYP E +  + + N   +D+ ++ S LEK TKYDLVSAVKRQSPF++QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

Arabidopsis top hitse value%identityAlignment
AT2G22660.1 Protein of unknown function (duplicated DUF1399)5.9e-2639.89Show/hide
Query:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------
        ++ + E+EW +AQKIEI VDL+AAAK+ L FL TVD N              RY A WLPL+ K+SE S + EG L                        
Subjt:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              +LDNS V+S+  ++ +C  +++ +W  LYP E +  + + N   +D+ ++ S LEK TKYDLVSAVKRQSPF++QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

AT2G22660.2 Protein of unknown function (duplicated DUF1399)5.9e-2639.89Show/hide
Query:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------
        ++ + E+EW +AQKIEI VDL+AAAK+ L FL TVD N              RY A WLPL+ K+SE S + EG L                        
Subjt:  EKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL------------------------

Query:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
              +LDNS V+S+  ++ +C  +++ +W  LYP E +  + + N   +D+ ++ S LEK TKYDLVSAVKRQSPF++QVS
Subjt:  ------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS

AT4G37900.1 Protein of unknown function (duplicated DUF1399)5.0e-2539.46Show/hide
Query:  MEKNNKE-LEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL----------------------
        M+K  ++ LEW +AQKI+I VDL+AAAK+ L FL  VD N              RY AYWLPL+A+++E S + +GPL                      
Subjt:  MEKNNKE-LEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSN--------------RYIAYWLPLVAKHSE-SPLFEGPL----------------------

Query:  --------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS
                +LDNS V+S+  +  +C  +++ +W  LYP E +  +F     E   P ++S LEK T YDLV AVKRQSPFF+QVS
Subjt:  --------ILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVPKELSQLEKYTKYDLVSAVKRQSPFFFQVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACAACAAAGAGCTTGAGTGGGCAAAAGCACAGAAGATTGAAATAGGTGTTGATCTTGTTGCTGCTGCTAAACGTCAGCTTCAGTTTCTCTCTACGGTCGA
CAGCAATCGGTACATTGCTTATTGGCTTCCATTGGTTGCCAAACATTCTGAATCCCCACTATTTGAAGGACCTTTAATACTTGACAATTCTAATGTTATATCAACTACCA
TTATTGAAAGTTCTTGTCTTAAAGAAAGTCAAAAAGTTTGGAATGAATTATACCCTCAAGAGGCCTTCAGCTTCAACTTCAACTTCAACTCACAAGAAGATGATGTCCCA
AAAGAGCTCTCACAACTTGAAAAATACACAAAATATGATCTTGTTTCAGCTGTTAAAAGACAGAGCCCATTCTTCTTTCAGGTTTCTTCTAGGAGTGGACCTTCT
mRNA sequenceShow/hide mRNA sequence
GAAAATGGAGAAGAACAACAAAGAGCTTGAGTGGGCAAAAGCACAGAAGATTGAAATAGGTGTTGATCTTGTTGCTGCTGCTAAACGTCAGCTTCAGTTTCTCTCTACGG
TCGACAGCAATCGGTACATTGCTTATTGGCTTCCATTGGTTGCCAAACATTCTGAATCCCCACTATTTGAAGGACCTTTAATACTTGACAATTCTAATGTTATATCAACT
ACCATTATTGAAAGTTCTTGTCTTAAAGAAAGTCAAAAAGTTTGGAATGAATTATACCCTCAAGAGGCCTTCAGCTTCAACTTCAACTTCAACTCACAAGAAGATGATGT
CCCAAAAGAGCTCTCACAACTTGAAAAATACACAAAATATGATCTTGTTTCAGCTGTTAAAAGACAGAGCCCATTCTTCTTTCAGGTTTCTTCTAGGAGTGGACCTTCT
Protein sequenceShow/hide protein sequence
MEKNNKELEWAKAQKIEIGVDLVAAAKRQLQFLSTVDSNRYIAYWLPLVAKHSESPLFEGPLILDNSNVISTTIIESSCLKESQKVWNELYPQEAFSFNFNFNSQEDDVP
KELSQLEKYTKYDLVSAVKRQSPFFFQVSSRSGPS