; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription initiation factor TFIID subunit 11
Genome locationchr07:19887738..19890934
RNA-Seq ExpressionLsi07G013710
SyntenyLsi07G013710
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR006809 - TAFII28-like protein domain
IPR009072 - Histone-fold
IPR045127 - Transcription initiation factor TFIID subunit 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19451.1 transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa]2.7e-9893.64Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAPVPADAF      DDPKSA+VATHS T  STTSMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

XP_004147964.1 transcription initiation factor TFIID subunit 11 [Cucumis sativus]1.1e-9692.27Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAP PADAF      DDPKSA+VATHS   ASTTSMFVSSSS+VS APKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+GPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

XP_016900577.1 PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo]7.7e-9893.18Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAPVPADAF      DDPKSA+VATHS T  STTSMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE 
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

XP_038904707.1 transcription initiation factor TFIID subunit 11 isoform X1 [Benincasa hispida]1.2e-9387.23Show/hide
Query:  ATNYVRSFLLVVFSFSRKPNQRYPTTMKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF-------DDPKSAAVATHSATTASTTSMFVS
        +TNY      + FS SRKPNQRY T MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAP  ADAF       DD KSAAVATHSA  AS+TSMFVS
Subjt:  ATNYVRSFLLVVFSFSRKPNQRYPTTMKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF-------DDPKSAAVATHSATTASTTSMFVS

Query:  SSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV
        SSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDK MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV
Subjt:  SSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV

Query:  GELVETARVVMTERNDSGPIRPCHLREAYRRLKQE
        GELVETARVVMTERNDSGPIRPCHLREAYRRLK E
Subjt:  GELVETARVVMTERNDSGPIRPCHLREAYRRLKQE

XP_038904708.1 transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida]2.6e-10187.9Show/hide
Query:  ATNYVRSFLLVVFSFSRKPNQRYPTTMKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF-------DDPKSAAVATHSATTASTTSMFVS
        +TNY      + FS SRKPNQRY T MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAP  ADAF       DD KSAAVATHSA  AS+TSMFVS
Subjt:  ATNYVRSFLLVVFSFSRKPNQRYPTTMKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF-------DDPKSAAVATHSATTASTTSMFVS

Query:  SSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV
        SSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDK MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV
Subjt:  SSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFV

Query:  GELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKIPRKSVPRLFR
        GELVETARVVMTERNDSGPIRPCHLREAYRRLK EGKIPRKSVPRLFR
Subjt:  GELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKIPRKSVPRLFR

TrEMBL top hitse value%identityAlignment
A0A0A0L5S4 TAFII28 domain-containing protein5.4e-9792.27Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAP PADAF      DDPKSA+VATHS   ASTTSMFVSSSS+VS APKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+GPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

A0A1S4DX73 transcription initiation factor TFIID subunit 113.7e-9893.18Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAPVPADAF      DDPKSA+VATHS T  STTSMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE 
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

A0A5D3D798 Transcription initiation factor TFIID subunit 111.3e-9893.64Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT+VAPVPADAF      DDPKSA+VATHS T  STTSMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAF------DDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKQEGKIPRKSVPRLFR
        YRRLK EGKIPRKSVPRLFR
Subjt:  YRRLKQEGKIPRKSVPRLFR

A0A6J1DFN0 transcription initiation factor TFIID subunit 111.6e-8887.5Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPA----DAFDDPK-----SAAVATHSA-TTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSA D +EI T+VA   A    D  DDPK     +AAVATHS   +A TTSMFVSSSSNVSAAPKTK+DDEEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPA----DAFDDPK-----SAAVATHSA-TTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+GPIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCH

Query:  LREAYRRLKQEGKIPRKSVPRLFR
        LREAYRRLK EGKIPRKSVPRLFR
Subjt:  LREAYRRLKQEGKIPRKSVPRLFR

A0A6J1FLN4 transcription initiation factor TFIID subunit 111.2e-8887.89Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSV-APVPADAF------DDPKSAAVATHSA--TTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSA DDLEI T+V A V ADA       D+PKSAA A  ++   +ASTTS+FVSSSSNVSAAPKTKEDD+EEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSV-APVPADAF------DDPKSAAVATHSA--TTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL

Query:  REAYRRLKQEGKIPRKSVPRLFR
        REAYRRLK EGKIPRKSVPRLFR
Subjt:  REAYRRLKQEGKIPRKSVPRLFR

SwissProt top hitse value%identityAlignment
F4HR03 Transcription initiation factor TFIID subunit 11b9.3e-3848.84Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSS
        MK SKDPFEAA EEQEESP  +    +  E                                           A  K K     E +   EVE  K  + 
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSS

Query:  GDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK
         DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SGPIRPCH+RE+YRRLK
Subjt:  GDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK

Query:  QEGKIPRKSVPRLFR
         +GK+P++SV RLFR
Subjt:  QEGKIPRKSVPRLFR

Q15544 Transcription initiation factor TFIID subunit 111.4e-1738.31Show/hide
Query:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAV---ATHSATTASTTSMFVSSSSNVS-AAPKTKEDDEEEEEENVEVELAKFPSSGDPD
        E    ++  + P  P A D   IP        DA  D K AA       S   +  T++    SS ++ AA K K D +E++E+  +V         D D
Subjt:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAV---ATHSATTASTTSMFVSSSSNVS-AAPKTKEDDEEEEEENVEVELAKFPSSGDPD

Query:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI
        ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRLK +G+I
Subjt:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI

Query:  P
        P
Subjt:  P

Q5RA91 Transcription initiation factor TFIID subunit 118.2e-1838.31Show/hide
Query:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTAS----TTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPD
        E    ++  + P  P A D   IP        DA  D K AA       +      TT     SS    AA K K D +E++E+  +V         D D
Subjt:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTAS----TTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPD

Query:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI
        ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRLK +G+I
Subjt:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI

Query:  P
        P
Subjt:  P

Q5U1X0 Transcription initiation factor TFIID subunit 112.4e-1736.82Show/hide
Query:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPD
        E    E+  + P +P + D   IP     V  DA  D K AA       +   + +  +   + S    AA K K D ++++E+  +V         D D
Subjt:  EAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPD

Query:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI
        ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRLK +G+I
Subjt:  KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKI

Query:  P
        P
Subjt:  P

Q9M565 Transcription initiation factor TFIID subunit 118.4e-5558.6Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPS
        MK SKDPFEAA  EEQEESPP SP         +    +  D   D     V        + TS+ V+ + N     K K++D+EEEEEN++VEL K+P+
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPS

Query:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK
        S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE+YRRLK
Subjt:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK

Query:  QEGKIPRKSVPRLFR
         EGK+P++SVPRLFR
Subjt:  QEGKIPRKSVPRLFR

Arabidopsis top hitse value%identityAlignment
AT1G20000.1 TBP-associated factor 11B6.6e-3948.84Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSS
        MK SKDPFEAA EEQEESP  +    +  E                                           A  K K     E +   EVE  K  + 
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSS

Query:  GDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK
         DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SGPIRPCH+RE+YRRLK
Subjt:  GDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK

Query:  QEGKIPRKSVPRLFR
         +GK+P++SV RLFR
Subjt:  QEGKIPRKSVPRLFR

AT4G20280.1 TBP-associated factor 116.0e-5658.6Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPS
        MK SKDPFEAA  EEQEESPP SP         +    +  D   D     V        + TS+ V+ + N     K K++D+EEEEEN++VEL K+P+
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHSATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPS

Query:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK
        S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE+YRRLK
Subjt:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK

Query:  QEGKIPRKSVPRLFR
         EGK+P++SVPRLFR
Subjt:  QEGKIPRKSVPRLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGTCCTAGAATCCCTCATTATTTGCCCCATTTTTCTTCTCTCCCTCTCCCCAGCGGCAAACTATCTCACTCCTCAGCTCCCGCCACAAACTACGTCAGATCGTT
TCTTCTGGTCGTTTTCTCTTTTTCCAGAAAACCTAATCAGAGATACCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTCGAAGAGCAGGAAGAATCGC
CTCCGAACTCCCCCTCTGCCCCCGACGACCTCGAAATTCCGACCAGTGTAGCCCCTGTTCCCGCCGACGCTTTTGATGATCCAAAATCCGCTGCTGTTGCTACGCATTCC
GCTACTACTGCATCCACCACTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGT
TGAACTTGCCAAATTTCCCTCGAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTCTCTCACAATTTACAGAGGAACAGATGAGTCGTTACGAATCCTTTCGCA
GAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCTAGCATCTCGGGAACGCAGAAAATTTCTGTACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTT
GTTGGTGAACTCGTAGAAACTGCAAGAGTTGTTATGACAGAGCGTAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCAAGAAGG
TAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAATCTCCAATTTCACAGTAAGTTTGGACTTAACATGAAATTTGATCATTCTGTAAGGCGTTGATGAGCTCACGGGAAAAAAGGGTAAAAAGGGCAGAAATCCCAAAAT
TTGATGGTAAGTCCTAGAATCCCTCATTATTTGCCCCATTTTTCTTCTCTCCCTCTCCCCAGCGGCAAACTATCTCACTCCTCAGCTCCCGCCACAAACTACGTCAGATC
GTTTCTTCTGGTCGTTTTCTCTTTTTCCAGAAAACCTAATCAGAGATACCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTCGAAGAGCAGGAAGAAT
CGCCTCCGAACTCCCCCTCTGCCCCCGACGACCTCGAAATTCCGACCAGTGTAGCCCCTGTTCCCGCCGACGCTTTTGATGATCCAAAATCCGCTGCTGTTGCTACGCAT
TCCGCTACTACTGCATCCACCACTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGA
AGTTGAACTTGCCAAATTTCCCTCGAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTCTCTCACAATTTACAGAGGAACAGATGAGTCGTTACGAATCCTTTC
GCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCTAGCATCTCGGGAACGCAGAAAATTTCTGTACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATG
TTTGTTGGTGAACTCGTAGAAACTGCAAGAGTTGTTATGACAGAGCGTAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCAAGA
AGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAATCACTCTGTTTAATTTATACTCTTTGCATTAGGAGTCTTTGGAAGAAAATTTCAATACTAAAGCATC
AAACTTAGGTAAAACATCTCATATATATCACTGAAGTTTCTAACATATTATGAATCGGCTTCTCATTTTACTACACACAAATTATTAAGGGAGGAAAACACAAGCATGGA
TTTCCCAGCACTCGAATTAAACCGTACATTTAAATAGCAAAACACATTTGATAATTATATGGTGTTGGAATACAATGACACGTAGGGCATGTTTGGGAGGATGAAATAGA
ATGGGTTTGTAATGGGTTTGATTCCAAGTCCATGTTTGACTTGAACGTTTTGGGCTTGGTTTGTAATACCAAACTTAGTCACATATGTGCATATGTTTATATACAAATAT
TTTTTAATTTTAGTAAATTATTTTATGAAAATTGATGGTAGG
Protein sequenceShow/hide protein sequence
MVSPRIPHYLPHFSSLPLPSGKLSHSSAPATNYVRSFLLVVFSFSRKPNQRYPTTMKQSKDPFEAAFEEQEESPPNSPSAPDDLEIPTSVAPVPADAFDDPKSAAVATHS
ATTASTTSMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMF
VGELVETARVVMTERNDSGPIRPCHLREAYRRLKQEGKIPRKSVPRLFR