; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRHOMBOID-like protein
Genome locationchr07:20088659..20088940
RNA-Seq ExpressionLsi07G013820
SyntenyLsi07G013820
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR002610 - Peptidase S54, rhomboid


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK22686.1 RHOMBOID-like protein 2 [Cucumis melo var. makuwa]4.9e-4495.7Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTNN PG YSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

XP_004147969.1 RHOMBOID-like protein 2 [Cucumis sativus]3.4e-4596.77Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTN PPGNYSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

XP_008448955.1 PREDICTED: RHOMBOID-like protein 2 [Cucumis melo]4.9e-4495.7Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTNN PG YSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

XP_022152814.1 RHOMBOID-like protein 2 [Momordica charantia]3.9e-4190.43Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKT+NPPGNYS+ YYQ++SEKQWTSWLVPMFVVA VAMFIVVMYVNNCPKH LG SEECVA+FLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST

XP_038903031.1 RHOMBOID-like protein 2 [Benincasa hispida]2.2e-4495.7Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTNNP GNY+N+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

TrEMBL top hitse value%identityAlignment
A0A0A0L1V2 RHOMBOID-like protein1.7e-4596.77Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTN PPGNYSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

A0A1S3BLK2 RHOMBOID-like protein2.4e-4495.7Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTNN PG YSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

A0A5D3DGF7 RHOMBOID-like protein2.4e-4495.7Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKTNN PG YSN+YYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKH LGSEECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

A0A6J1DH45 RHOMBOID-like protein1.9e-4190.43Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAKT+NPPGNYS+ YYQ++SEKQWTSWLVPMFVVA VAMFIVVMYVNNCPKH LG SEECVA+FLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST

A0A6J1HMW0 RHOMBOID-like protein7.2e-4188.3Show/hide
Query:  MGSRDLERGGAK-TNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        MGSRDLERGGAK  NNPPGNYS +YYQ+ SEKQWTSWLVPMFVVANVAMF+VVMYVNNCP++ LGS+ECVARFLGRFSFEPLRVNPLFGPSSST
Subjt:  MGSRDLERGGAK-TNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

SwissProt top hitse value%identityAlignment
F4JBM4 RHOMBOID-like protein 44.5e-1661.9Show/hide
Query:  KQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        + W  WL+P FVVANVA+F++ MYVNNCPK    S +C A FLGRFSF+  R NPL GPSS T
Subjt:  KQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

O82756 RHOMBOID-like protein 73.1e-1749.44Show/hide
Query:  DLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST
        D E G  +TNN          + T + QW SW++P+ V+ANV +F+VVMY N+CP     S  C+A+FLGRFSFE  + NPL GPSSST
Subjt:  DLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST

Q8VZ48 RHOMBOID-like protein 6, mitochondrial2.2e-1851.06Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST
        M SRD+ERG                +   + QWT+WL P  VVANV++FIVVMY N+CPK   G+  +CVA+ L RFSF+PLR NP  GPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST

Q9CAN1 RHOMBOID-like protein 21.8e-2561.05Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETS-EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST
        M +RD+ER G K      NY   +Y+E+S E  WTSWL+P  VVAN+A+FI VM+VN+CPK   G ++ECVARFLGRFSF+PL+ NPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETS-EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST

Q9LYP1 RHOMBOID-like protein 33.6e-2161.84Show/hide
Query:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST
        S  +       +WTSWLVPMFVVANVA+F+V M+VNNCP H+        CVA+FLGR SFEPLR NPLFGPSS T
Subjt:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST

Arabidopsis top hitse value%identityAlignment
AT1G12750.1 RHOMBOID-like protein 61.5e-1951.06Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST
        M SRD+ERG                +   + QWT+WL P  VVANV++FIVVMY N+CPK   G+  +CVA+ L RFSF+PLR NP  GPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST

AT1G12750.2 RHOMBOID-like protein 61.5e-1951.06Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST
        M SRD+ERG                +   + QWT+WL P  VVANV++FIVVMY N+CPK   G+  +CVA+ L RFSF+PLR NP  GPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE-ECVARFLGRFSFEPLRVNPLFGPSSST

AT1G63120.1 RHOMBOID-like 21.3e-2661.05Show/hide
Query:  MGSRDLERGGAKTNNPPGNYSNTYYQETS-EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST
        M +RD+ER G K      NY   +Y+E+S E  WTSWL+P  VVAN+A+FI VM+VN+CPK   G ++ECVARFLGRFSF+PL+ NPLFGPSSST
Subjt:  MGSRDLERGGAKTNNPPGNYSNTYYQETS-EKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLG-SEECVARFLGRFSFEPLRVNPLFGPSSST

AT5G07250.1 RHOMBOID-like protein 32.5e-2261.84Show/hide
Query:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST
        S  +       +WTSWLVPMFVVANVA+F+V M+VNNCP H+        CVA+FLGR SFEPLR NPLFGPSS T
Subjt:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST

AT5G07250.2 RHOMBOID-like protein 32.5e-2261.84Show/hide
Query:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST
        S  +       +WTSWLVPMFVVANVA+F+V M+VNNCP H+        CVA+FLGR SFEPLR NPLFGPSS T
Subjt:  SNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSE---ECVARFLGRFSFEPLRVNPLFGPSSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTCGAGATCTGGAGAGAGGAGGGGCTAAAACCAATAACCCACCTGGGAATTACTCAAATACCTATTACCAAGAAACCTCAGAGAAACAATGGACTTCTTGGTT
GGTTCCTATGTTCGTGGTGGCTAATGTTGCTATGTTCATTGTGGTTATGTATGTTAATAACTGTCCCAAACATTATCTGGGTTCTGAGGAATGTGTTGCCAGGTTTCTTG
GAAGGTTTTCTTTTGAGCCCCTTAGAGTGAATCCTTTGTTTGGTCCTTCTTCTTCCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTCGAGATCTGGAGAGAGGAGGGGCTAAAACCAATAACCCACCTGGGAATTACTCAAATACCTATTACCAAGAAACCTCAGAGAAACAATGGACTTCTTGGTT
GGTTCCTATGTTCGTGGTGGCTAATGTTGCTATGTTCATTGTGGTTATGTATGTTAATAACTGTCCCAAACATTATCTGGGTTCTGAGGAATGTGTTGCCAGGTTTCTTG
GAAGGTTTTCTTTTGAGCCCCTTAGAGTGAATCCTTTGTTTGGTCCTTCTTCTTCCACGTGA
Protein sequenceShow/hide protein sequence
MGSRDLERGGAKTNNPPGNYSNTYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHYLGSEECVARFLGRFSFEPLRVNPLFGPSSST