; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionreplication factor C subunit 2
Genome locationchr07:20093678..20100627
RNA-Seq ExpressionLsi07G013830
SyntenyLsi07G013830
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005663 - DNA replication factor C complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003689 - DNA clamp loader activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003593 - AAA+ ATPase domain
IPR003959 - ATPase, AAA-type, core
IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR013748 - Replication factor C, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448956.1 PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo]3.0e-14473.95Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG  SSS+YD+PWVEKYRP KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVV+QAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

XP_022152824.1 replication factor C subunit 2 [Momordica charantia]4.7e-14574.47Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSS G +SSSYDMPWVEK+RPTKV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

XP_022965099.1 replication factor C subunit 2 [Cucurbita maxima]4.4e-14372.63Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG SSSSSYDMPWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKN+VRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACA LKQLYD+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKE GFAHMRICDGVGSYLQ+CGLLAKLS+VRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

XP_023551831.1 replication factor C subunit 2 [Cucurbita pepo subsp. pepo]2.6e-14372.63Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG SSSSSYDMPWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKN+VRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACA LKQLYD+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLS+ RETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

XP_038905731.1 replication factor C subunit 2 [Benincasa hispida]2.7e-14574.74Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG  SSSSYDMPWVEKYRP+ VVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

TrEMBL top hitse value%identityAlignment
A0A0A0L763 AAA domain-containing protein2.8e-14373.42Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG  SSS+YD+PWVEKYRP KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVV+QAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

A0A1S3BLV0 replication factor C subunit 2 isoform X11.5e-14473.95Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG  SSS+YD+PWVEKYRP KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVV+QAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

A0A6J1DH57 replication factor C subunit 22.3e-14574.47Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSS G +SSSYDMPWVEK+RPTKV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLSMVRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

A0A6J1E9R2 replication factor C subunit 24.0e-14272.22Show/hide
Query:  SSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMF
        +SS GSSSSSYDMPWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIKMF
Subjt:  SSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMF

Query:  AQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCI
        AQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE             
Subjt:  AQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCI

Query:  PDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFD
                                         KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKN+VRNVLEGKFD
Subjt:  PDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFD

Query:  DACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        DACA LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLS+VRETAKAP
Subjt:  DACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

A0A6J1HQ24 replication factor C subunit 22.1e-14372.63Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSSG SSSSSYDMPWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   ++  + +TT F        K        CAIVRFSRLTDQEILGRLMVVLQAE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVKN+VRNVLEGK
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FDDACA LKQLYD+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKE GFAHMRICDGVGSYLQ+CGLLAKLS+VRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

SwissProt top hitse value%identityAlignment
P35250 Replication factor C subunit 24.7e-9250Show/hide
Query:  ASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKM
        A S    S+  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTTSIL LA  LLGP  K+ +LELNAS+DRGIDVVRNKIKM
Subjt:  ASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKM

Query:  FAQKKVTLPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNA
        FAQ+KVTLP GRHK + L    S+       +   +EI       TT F        K        CA++R+++LTD +IL RLM V++ E         
Subjt:  FAQKKVTLPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNA

Query:  LSCIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE
                                             +VPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF F+N +NVFKVCD+PHPL VK ++++ + 
Subjt:  LSCIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE

Query:  GKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL
           D+A   L  L+ LGYSP DII  +FR+ K + MAEYLKLEF+KE G+ HM+I +GV S LQM GLLA+L
Subjt:  GKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL

Q641W4 Replication factor C subunit 26.2e-9249.59Show/hide
Query:  SSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVT
        ++  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTTSIL LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVT
Subjt:  SSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVT

Query:  LPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP
        LP GRHK + L    S+       +   +EI       TT F        K        CA++R+++LTD ++L RLM V++ E                
Subjt:  LPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP

Query:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDAC
                                      KVPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF ++N +NVFKVCD+PHPL VK ++++ ++   D+A 
Subjt:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDAC

Query:  AGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL
          L  L+ LGYSP D+I  +FR+ K + MAEYLKLEF+KE G+ HM++ +GV S LQM GLLA+L
Subjt:  AGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL

Q7XRX1 Replication factor C subunit 47.5e-13065.09Show/hide
Query:  ASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKM
        +SSS    + +YD+PWVEKYRPT+V D+ GN DAV+RLQ IARDGNMPNLILSGPPGTGKTTSIL+LAHELLGP+Y+E VLELNASDDRG+DVVRNKIKM
Subjt:  ASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKM

Query:  FAQKKVTLPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNA
        FAQKKVTL PGRHK + L    S+       +   +EI      +TT F        K        CAIVRFSRL+DQEILGRLM+V+ AE         
Subjt:  FAQKKVTLPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNA

Query:  LSCIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE
                                             KVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+NVFKVCDQPHPLHVKN+V+NVL+
Subjt:  LSCIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE

Query:  GKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKA
        GKFD+AC+ LKQLYDLGYSPTDIITTLFR+IKNYDMAEYLKLE +KETGFAHMRICDGVGS+LQ+ GLLAK ++VRETAKA
Subjt:  GKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKA

Q9CAM7 Replication factor C subunit 21.2e-13870.26Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSS  S+   Y+ PWVEKYRP+KVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG NYKE VLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   I+  + ST    A N +  K        CA+VRFSRL+DQ+ILGRL+VV+ AE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQATFSGF FVNQ+NVFKVCDQPHPLHVKN+VRNVLE K
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLS+VRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

Q9WUK4 Replication factor C subunit 21.4e-9149.59Show/hide
Query:  SSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVT
        ++  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTTSIL LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVT
Subjt:  SSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVT

Query:  LPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP
        LP GRHK + L    S+       +   +EI       TT F        K        CA++R+++LTD ++L RLM V++ E                
Subjt:  LPPGRHKFLTL---GSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP

Query:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDAC
                                      KVPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF ++N +NVFKVCD+PHPL VK ++++ ++   D+A 
Subjt:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDAC

Query:  AGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL
          L  L+ LGYSP D+I  +FR+ K + MAEYLKLEF+KE G+ HM++ +GV S LQM GLLA+L
Subjt:  AGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKL

Arabidopsis top hitse value%identityAlignment
AT1G21690.1 ATPase family associated with various cellular activities (AAA)2.1e-2628.73Show/hide
Query:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN-YKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH
        PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L GP  YK  VLELNASDDRGI+VVR KIK FA   V     R 
Subjt:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN-YKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH

Query:  KFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPD
              S   ++L     + E  Q  N    + E Y+  + +    C  I          CA  RF  L+++ +  R++ +   E +S+           
Subjt:  KFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPD

Query:  PDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDD
                                             E L  +   + GD+R+A+  LQ+    F                PL V N +    + G FD 
Subjt:  PDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDD

Query:  ACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM
        A   +  +   GY  + II  LF I+   + D+ +  K +  K       R+ DG   YLQ+
Subjt:  ACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM

AT1G21690.2 ATPase family associated with various cellular activities (AAA)9.7e-2428.18Show/hide
Query:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN-YKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH
        PWVEKYRP +V D+   E+              P+++  GPPGTGKTT+ LA+AH+L GP  YK  VLELNASDDRGI+VVR KIK FA   V     R 
Subjt:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN-YKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH

Query:  KFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPD
              S   ++L     + E  Q  N    + E Y+  + +    C  I          CA  RF  L+++ +  R++ +   E +S+           
Subjt:  KFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPD

Query:  PDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDD
                                             E L  +   + GD+R+A+  LQ+    F                PL V N +    + G FD 
Subjt:  PDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDD

Query:  ACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM
        A   +  +   GY  + II  LF I+   + D+ +  K +  K       R+ DG   YLQ+
Subjt:  ACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM

AT1G21690.4 ATPase family associated with various cellular activities (AAA)7.4e-2427.98Show/hide
Query:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK
        PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L       GVLELNASDDRGI+VVR KIK FA   V     R  
Subjt:  PWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK

Query:  FLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP
             S   ++L     + E  Q  N    + E Y+  + +    C  I          CA  RF  L+++ +  R++ +   E +S+            
Subjt:  FLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCI----------CAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP

Query:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDDA
                                            E L  +   + GD+R+A+  LQ+    F                PL V N +    + G FD A
Subjt:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLE-GKFDDA

Query:  CAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM
           +  +   GY  + II  LF I+   + D+ +  K +  K       R+ DG   YLQ+
Subjt:  CAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM

AT1G63160.1 replication factor C 28.2e-14070.26Show/hide
Query:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK
        MASSS  S+   Y+ PWVEKYRP+KVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG NYKE VLELNASDDRGIDVVRNKIK
Subjt:  MASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIK

Query:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS
        MFAQKKVTLPPGRHK + L     +       +   I+  + ST    A N +  K        CA+VRFSRL+DQ+ILGRL+VV+ AE           
Subjt:  MFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALS

Query:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK
                                           KVPYVPEGLEAIIFTADGDMRQALNNLQATFSGF FVNQ+NVFKVCDQPHPLHVKN+VRNVLE K
Subjt:  CIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK

Query:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP
        FD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGLLAKLS+VRETAKAP
Subjt:  FDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP

AT1G77470.1 replication factor C subunit 36.9e-3025.13Show/hide
Query:  GSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQ-K
        G    S   PWVEKYRP  + D+  + D +  +  +  +  +P+L+L GPPGTGKT++ILA+A +L GP Y+  +LELNASDDRGIDVVR +I+ FA  +
Subjt:  GSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQ-K

Query:  KVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP
          +L     K + L     +       +  +I+     +T F     ++ K        C   RF+ L    +  RL  V++AE++ +       C    
Subjt:  KVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAIVRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDP

Query:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSG--------FRFVNQDNVFKVCDQPHPLHVKNVVRNVL
                                             GL A++  ++GDMR+ALN LQ+T            + + +++V+     P P  ++ +   +L
Subjt:  DYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSG--------FRFVNQDNVFKVCDQPHPLHVKNVVRNVL

Query:  EGKFDDACAGLKQLYD-LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVR
           FD+    + ++    G +  DI+  +   I    M   ++++ + +      R+  G    LQ+  +++  +  R
Subjt:  EGKFDDACAGLKQLYD-LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACGGCTGTCATTAACGCTAAGAATAAAATGGATTTTGCCCTTCTATAAAGAAAAAAAACCAAGCCGAGGGCGCGAAGCGGGAACTGGAAGGGCTCGAGTTTTTTCCTG
TATTTGTTCTACTCATCCTCGAGCATCCCCATTCATCTGTGCAAAATCCATGGCGTCTTCTTCAGGCGGCAGCAGCAGCAGCAGCTACGACATGCCATGGGTGGAGAAGT
ACAGGCCCACCAAGGTCGTTGACATTGTGGGCAATGAAGATGCAGTTTCTCGCCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCA
GGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCACGAGCTCTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGGGAATAGATGT
TGTGAGGAACAAAATCAAGATGTTTGCCCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAATTTCTTACTTTAGGTTCCATTGTTTATTTATTACTTTTGGTGATGG
TTATGATTGTGGAAATAATCCAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCAAACACAACACGTTTTGCCCTTGCATATGTGCAATT
GTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGCTTCAAGCAGAAAAGGTATCGATTATTTTTTATAATGCTTTGAGCTGCATTCCAGA
TCCAGACTACATTTCTGTTGTTACAAATAAAATCACTCTGCTAATTTTAATTGCTGTTATTGAAAACTTCATACTGCTTAATTATCTTCTGAAGAAAGTACCCTATGTTC
CAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCACTGAATAATTTGCAAGCTACATTTAGTGGATTCCGCTTTGTAAACCAGGACAATGTT
TTCAAGGTTTGCGATCAACCGCATCCCCTGCATGTGAAGAATGTGGTGCGCAATGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGGTCTGAAGCAACTGTACGACTT
AGGCTATTCTCCCACTGACATAATTACCACTCTTTTCCGTATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATA
TGAGAATTTGTGATGGAGTTGGTTCTTACCTTCAGATGTGCGGCCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCCCCATGA
mRNA sequenceShow/hide mRNA sequence
TCACGGCTGTCATTAACGCTAAGAATAAAATGGATTTTGCCCTTCTATAAAGAAAAAAAACCAAGCCGAGGGCGCGAAGCGGGAACTGGAAGGGCTCGAGTTTTTTCCTG
TATTTGTTCTACTCATCCTCGAGCATCCCCATTCATCTGTGCAAAATCCATGGCGTCTTCTTCAGGCGGCAGCAGCAGCAGCAGCTACGACATGCCATGGGTGGAGAAGT
ACAGGCCCACCAAGGTCGTTGACATTGTGGGCAATGAAGATGCAGTTTCTCGCCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCA
GGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCACGAGCTCTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGGGAATAGATGT
TGTGAGGAACAAAATCAAGATGTTTGCCCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAATTTCTTACTTTAGGTTCCATTGTTTATTTATTACTTTTGGTGATGG
TTATGATTGTGGAAATAATCCAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCAAACACAACACGTTTTGCCCTTGCATATGTGCAATT
GTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGCTTCAAGCAGAAAAGGTATCGATTATTTTTTATAATGCTTTGAGCTGCATTCCAGA
TCCAGACTACATTTCTGTTGTTACAAATAAAATCACTCTGCTAATTTTAATTGCTGTTATTGAAAACTTCATACTGCTTAATTATCTTCTGAAGAAAGTACCCTATGTTC
CAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCACTGAATAATTTGCAAGCTACATTTAGTGGATTCCGCTTTGTAAACCAGGACAATGTT
TTCAAGGTTTGCGATCAACCGCATCCCCTGCATGTGAAGAATGTGGTGCGCAATGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGGTCTGAAGCAACTGTACGACTT
AGGCTATTCTCCCACTGACATAATTACCACTCTTTTCCGTATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATA
TGAGAATTTGTGATGGAGTTGGTTCTTACCTTCAGATGTGCGGCCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCCCCATGAGTAGTCAACATGTAGAGG
CTGCTTAAAAGTTGGCTCAAAGAGGAGGCGGTATGAATGGGGGAATGCTCATATCTACGCCAACAATGGCTGACAAATGAAGCTTGTAGAGGGTCCATATGTTAGTAATA
TTTTATTGGTGATTTGGAACAAATCGTTTGCCAGTTGGAAACATGGCCATGGGTGAGTAACTTCAAAGCCAACTACTACGATCCAACCACCTTCAGTTGCCAATAAAATA
AATTCCCATCCGGAACAACAAATTTGTAGATTCACACTTTTCCCTTGAGATTTCAAAAGGCAATTTCAGCTTTTACTCATTTTTCTTACCATTTTTAT
Protein sequenceShow/hide protein sequence
SRLSLTLRIKWILPFYKEKKPSRGREAGTGRARVFSCICSTHPRASPFICAKSMASSSGGSSSSSYDMPWVEKYRPTKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPP
GTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKFLTLGSIVYLLLLVMVMIVEIIQHDNWSTTSFEAYNGNIFKHNTFCPCICAI
VRFSRLTDQEILGRLMVVLQAEKVSIIFYNALSCIPDPDYISVVTNKITLLILIAVIENFILLNYLLKKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQDNV
FKVCDQPHPLHVKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSMVRETAKAP