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Lsi07G014290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G014290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine-rich protein-related
Genome locationchr07:20829444..20829749
RNA-Seq ExpressionLsi07G014290
SyntenyLsi07G014290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577543.1 hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2566.34Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        M+ I  EPKQ  TNC +PTSKS   E E DD KKNAQ          MT+SPS +S CLCSPTTH+GSFRCR HR TAISRGGS GSNLSDLAQKS A+E
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

KAG7015599.1 hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2566.34Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        M+ I  EPKQ  TNC +PTSKS   E E DD KKNAQ          MT+SPS +S CLCSPTTH+GSFRCR HR TAISRGGS GSNLSDLAQKS A+E
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]2.8e-4088.12Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        MD IRT+PKQTKTNCKTPTSKS + E+EFDDLKKNA +LMSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST+ISRGGSVGSNLSDL QKS AME
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]3.0e-3986.14Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        MD IRT+ KQTKTNCKTPTSKS + E+EFDDLKKNA +LMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA+SRG SVGSNLSDL QKS  ME
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]5.0e-3478.43Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNA-QMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAM
        MD +  EPKQ K NCKTPT+KS L E + D+LKK++  ++MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKS AM
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNA-QMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAM

Query:  ED
        ED
Subjt:  ED

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein1.3e-4088.12Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        MD IRT+PKQTKTNCKTPTSKS + E+EFDDLKKNA +LMSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST+ISRGGSVGSNLSDL QKS AME
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

A0A5D3D753 Putative PGPS/D10 protein1.5e-3986.14Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME
        MD IRT+ KQTKTNCKTPTSKS + E+EFDDLKKNA +LMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA+SRG SVGSNLSDL QKS  ME
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAME

Query:  D
        D
Subjt:  D

A0A5N6L3X1 Uncharacterized protein1.5e-1550.53Show/hide
Query:  EPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAMED
        E K  K N K    K  + E   DD+KK+  +L+SP+      K      NCLCSPTTH+GSFRCR HR++++ RGGSVGS LS+LA KSGA+ D
Subjt:  EPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAMED

A0A6J1CNY2 uncharacterized protein LOC1110133672.4e-3478.43Show/hide
Query:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNA-QMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAM
        MD +  EPKQ K NCKTPT+KS L E + D+LKK++  ++MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKS AM
Subjt:  MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNA-QMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAM

Query:  ED
        ED
Subjt:  ED

W9SBP1 Uncharacterized protein7.4e-1552.13Show/hide
Query:  PKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAMED
        P++ K N      K  + +   ++LKK   +L SP A   +TKS S + NCLCSPTTH GSFRCR HRS+ + RGGSVGSNLS+LA+K GA+ D
Subjt:  PKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAMED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein5.2e-0548.89Show/hide
Query:  LSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNL
        LSR T     K+ C+CSPTTH GSF+C+ HR+ ++ R  SV +N+
Subjt:  LSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNL

AT1G67910.1 unknown protein2.1e-0650.98Show/hide
Query:  NAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSV
        N+ + +    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  NAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSV

AT1G67910.2 unknown protein2.1e-0650.98Show/hide
Query:  NAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSV
        N+ + +    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  NAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSV

AT3G13227.1 serine-rich protein-related5.4e-1047.06Show/hide
Query:  KSVLAESEFDDLKKNAQMLMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---ISRGGSVGSNLSDLA
        K   A+   DD+K+     MSP              M+KS S++ NCLC+PTTH GSFRCR HR  A   +SRG SV SNLS LA
Subjt:  KSVLAESEFDDLKKNAQMLMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---ISRGGSVGSNLSDLA

AT5G55980.1 serine-rich protein-related2.1e-0953.57Show/hide
Query:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSD-LAQKSGAMED
        R +   S + NCLCSPTTH GSFRCR HR  +++R GS+GSNL+  L+ KS    D
Subjt:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSD-LAQKSGAMED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAATCAGGACAGAGCCGAAACAGACGAAGACGAATTGCAAGACACCGACCTCGAAATCCGTACTGGCGGAGTCGGAATTCGACGATCTGAAGAAGAATGCACA
AATGCTAATGTCTCCGACAGCGTTGTCGAGGATGACGAAGTCGCCCAGCATTAAATCGAACTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCC
ACCGGAGCACCGCCATCTCCCGTGGCGGGTCCGTCGGCTCCAATCTCTCGGATCTGGCTCAGAAATCGGGGGCGATGGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAATCAGGACAGAGCCGAAACAGACGAAGACGAATTGCAAGACACCGACCTCGAAATCCGTACTGGCGGAGTCGGAATTCGACGATCTGAAGAAGAATGCACA
AATGCTAATGTCTCCGACAGCGTTGTCGAGGATGACGAAGTCGCCCAGCATTAAATCGAACTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCC
ACCGGAGCACCGCCATCTCCCGTGGCGGGTCCGTCGGCTCCAATCTCTCGGATCTGGCTCAGAAATCGGGGGCGATGGAGGATTAA
Protein sequenceShow/hide protein sequence
MDSIRTEPKQTKTNCKTPTSKSVLAESEFDDLKKNAQMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLAQKSGAMED