; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G014780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G014780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionYrdC-like domain-containing protein
Genome locationchr07:21548291..21552004
RNA-Seq ExpressionLsi07G014780
SyntenyLsi07G014780
Gene Ontology termsGO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05316.1 yrdC domain-containing protein [Cucumis melo var. makuwa]2.1e-15581.25Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD

Query:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD
        GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Subjt:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD

Query:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

XP_004145661.1 uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus]4.5e-15890.91Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVY IVCDLKNPSAIERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

XP_008450106.1 PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo]8.7e-16292.86Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

XP_023527501.1 uncharacterized protein LOC111790710 [Cucurbita pepo subsp. pepo]4.3e-15391.36Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI NVKS+VY SAASSLSSVRSFA IRFPS P  +RFDGS TSRRLQVLAM VKRSPKRLKYSAPRFTKEGSLLYVKAESGED WKLEPIV+LLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+A
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGA+LPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  P
        P
Subjt:  P

XP_038877956.1 uncharacterized protein YciO [Benincasa hispida]1.5e-16193.85Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MIVNVKS+VY S ASS SSVRS+A IRFP  PSAIRF GSETSRRLQVLA VVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVY IVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMDAPLISTSVK  KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIRI
        PTVGEDIRI
Subjt:  PTVGEDIRI

TrEMBL top hitse value%identityAlignment
A0A0A0LBV9 YrdC-like domain-containing protein2.2e-15890.91Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVY IVCDLKNPSAIERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

A0A1S3BMX4 uncharacterized protein YciO isoform X14.2e-16292.86Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

A0A5A7TLP4 YrdC domain-containing protein2.4e-14978.21Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPS------KPLSILCHSFRDIDKYTT
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRR+K +  S       PLSILCHSFRDIDKYTT
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPS------KPLSILCHSFRDIDKYTT

Query:  GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIY
        GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIY
Subjt:  GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIY

Query:  GQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        GQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  GQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

A0A5D3C4N1 YrdC domain-containing protein1.0e-15581.25Show/hide
Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGD

Query:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD
        GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Subjt:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD

Query:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

A0A6J1J9P6 uncharacterized protein LOC1114825222.7e-15391.72Show/hide
Query:  MIVNVKSNVYSSAA-SSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAV
        MIVNVKS+ Y SAA SSLSSVRSFA IRFPSPP A+RFDGS TSRRLQVLAM VKRSPKRLKYSAPRFTK+GSLLYVKAESGED WKLEPIV+LLKEGAV
Subjt:  MIVNVKSNVYSSAA-SSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAV

Query:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKY
        GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+
Subjt:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKY

Query:  ASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDG
        ASRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGARLPWMVAE D 
Subjt:  ASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDG

Query:  EP
        EP
Subjt:  EP

SwissProt top hitse value%identityAlignment
P0AFR4 Uncharacterized protein YciO3.0e-2430.05Show/hide
Query:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
        V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P+  +
Subjt:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P0AFR5 Uncharacterized protein YciO3.0e-2430.05Show/hide
Query:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
        V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P+  +
Subjt:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P0AFR6 Uncharacterized protein YciO3.0e-2430.05Show/hide
Query:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
        V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P+  +
Subjt:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P45103 Uncharacterized protein HI_11985.2e-2430.88Show/hide
Query:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
        V +L++G V V PTD+ YA+ C + +  A++R+  I+ +      +++C    ++  Y         + ++  +R++K+  PG YTFILTA+KELP+  +
Subjt:  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGAR
                 + RK +G+R+PD+ I   +L  +  P++S S+  P +E+    DP  I D   +  +D ++ GG    +P+TVVD+T     ILR+G G+ 
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGAR

Query:  LPWM
         P++
Subjt:  LPWM

Q86U90 YrdC domain-containing protein, mitochondrial2.4e-1330.36Show/hide
Query:  VKAESGE-DGW--KLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKY-TTGFPRGDGQGHSNIFRMVKHCL
        V+A S E  GW   L   V  L+ GAV  +PTDT+Y + C     +A+  + R+K    +KPL++      D+ +Y     P G          ++K  L
Subjt:  VKAESGE-DGW--KLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKY-TTGFPRGDGQGHSNIFRMVKHCL

Query:  PGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVAD----
        PGP T ++  S+EL K    +            VG+RIPD    Q + +  + PL  TS     +    L+     D++ Q  L  V+DGG ++ D    
Subjt:  PGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVAD----

Query:  ----PSTVVDMTITPSK--ILRQG
             STVVD+++ P K  I+R G
Subjt:  ----PSTVVDMTITPSK--ILRQG

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain5.2e-11267.13Show/hide
Query:  LIRFPSP-----PSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAE-SGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPS
        L+  PSP     PS +    S + RR  ++A+  KRSPKRLKYS PRFTKEG L+Y++ +  G D WKL+P+++LLK+GAVGVIPTDTVYAI CD KN S
Subjt:  LIRFPSP-----PSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAE-SGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPS

Query:  AIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAI
        A+ER+RRIK IE SKPLSILC S RDID +T GFPRGDG GH+N+FR VK CLPGPYTFILTASKELPK C+ YGTT+ KYASRKNVGVRI DD +CQAI
Subjt:  AIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAI

Query:  LEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDI
        L++MDAPLI TSVK PKENEW++DP  I DIYG EGLDFVVDGG+RVA+PST+VDMT    K++R+GKG  LPWMV EDD E ++ +D+
Subjt:  LEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCTTCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTT
CGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGAAGGGAGCTTGC
TATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGTATGCAATA
GTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAATATAGAGCCTTCAAAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAA
ATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCGCATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTGACTGCAAGCAAAG
AGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAA
AAGATGGATGCCCCATTAATATCCACAAGTGTCAAATGCCCGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTT
TGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGG
TAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGA
mRNA sequenceShow/hide mRNA sequence
AATAGATAAATATATAAATATATAAAATCAAATTAAAATGTGACGTGGCATTCCAGGTGGGAAGTTCTATCTATGATGTGCTTCGTCTCCGATCGCAGCTTCCGATTCTT
TTGCTCTCAGTTCCTAATTCCGGCGATGCACTGCCACTGATTCCCCAATCTCCAAAATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCT
TCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTTCGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCG
GAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGAAGGGAGCTTGCTATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTA
ATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGTATGCAATAGTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAAT
ATAGAGCCTTCAAAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCG
CATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAA
GGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAAAAGATGGATGCCCCATTAATATCCACAAGTGTCAAATGCCCGAAGGAAAATGAG
TGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGAC
CATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGACCTG
CCATTTTGTAGATAATCCACTGAACATATTGCATGGAAGACATGATCCAGTTCCATTTAACAAACAAATCAGCTGGAGTTTGTACAGTGTTTGTTCTTGGGATATAAACA
ATAGGAATAGGAAGGTGTAAAGAAAACTGAAAGGGGATCCTTTCCTTTCAAAGTGGAAGACCAAGTGTGGCTATACTGCTTGTCTTCCAGGTTTTTTCTCAACTTGAAAA
TTAGAATCTCTTTTACCTATGTAACTCGTATCATATGCAAATGCAAATGCAATGCAATCCTCATTCTACATTCTCTCTT
Protein sequenceShow/hide protein sequence
MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAI
VCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILE
KMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIRI