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Lsi07G014800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G014800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationchr07:21563778..21568003
RNA-Seq ExpressionLsi07G014800
SyntenyLsi07G014800
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042928.1 hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa]2.9e-3478.1Show/hide
Query:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPET
        M+GKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+ SQHNIAL+V DNP RDTTATR SLSQ DH YGIVADEGVD+KAANYISSTLARFK  NE     
Subjt:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPET

Query:  IMDAI
         M +I
Subjt:  IMDAI

KAG6588895.1 hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3174.47Show/hide
Query:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPETIM
        PFYKQY G+KTK TGLVGYVFHRDY +IS HN+AL+VH+NPG DT  TRDSL+Q D+LYGIVADEG+D+KAANYISSTLARFK  NE  P  I+
Subjt:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPETIM

XP_004145664.1 protein transport protein Sec61 subunit gamma [Cucumis sativus]2.4e-28100Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_007215225.2 uncharacterized protein LOC18784392 [Prunus persica]5.3e-2898.55Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_028063760.1 protein transport protein Sec61 subunit gamma [Camellia sinensis]4.0e-2898.55Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A0A0LVE7 Uncharacterized protein7.4e-3684.04Show/hide
Query:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNE
        MRGKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+SQHNI L+V D+PGRDTTATRDSLSQ D  YGI+ADEGVD+KAANYISSTLARFK  NE
Subjt:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNE

A0A1U8ISF2 protein transport protein Sec61 subunit gamma1.1e-28100Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A287TRG3 Uncharacterized protein2.3e-2992Show/hide
Query:  AAPETIMDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        AAP+  MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  AAPETIMDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A453NIA0 Uncharacterized protein6.7e-2991.89Show/hide
Query:  APETIMDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        AP+  MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  APETIMDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A5D3C0J6 Uncharacterized protein1.4e-3478.1Show/hide
Query:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPET
        M+GKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+ SQHNIAL+V DNP RDTTATR SLSQ DH YGIVADEGVD+KAANYISSTLARFK  NE     
Subjt:  MRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPET

Query:  IMDAI
         M +I
Subjt:  IMDAI

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-16.4e-2994.12Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-26.4e-2994.12Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma7.6e-3095.65Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma3.8e-2173.53Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-32.7e-2789.71Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein1.9e-2889.71Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein4.6e-3094.12Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein4.6e-3094.12Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAGACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGACTATAGTAGTATTTCTCAACA
CAACATTGCTTTAGTCGTGCACGATAACCCCGGTCGAGACACGACTGCGACTCGTGACTCGTTAAGTCAGGTTGATCATTTGTATGGAATCGTAGCTGATGAAGGTGTCG
ATTTAAAGGCTGCAAATTATATTTCCTCCACTCTAGCACGGTTCAAAGGCTCGAACGAAGCCGCACCAGAAACAATAATGGACGCCATTGATTCCGTCTTCGATCCACTC
CGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGG
ATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAGACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGACTATAGTAGTATTTCTCAACA
CAACATTGCTTTAGTCGTGCACGATAACCCCGGTCGAGACACGACTGCGACTCGTGACTCGTTAAGTCAGGTTGATCATTTGTATGGAATCGTAGCTGATGAAGGTGTCG
ATTTAAAGGCTGCAAATTATATTTCCTCCACTCTAGCACGGTTCAAAGGCTCGAACGAAGCCGCACCAGAAACAATAATGGACGCCATTGATTCCGTCTTCGATCCACTC
CGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGG
ATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAGACAGCTGAGGCAACAGAAAGAGCTGGCCGGGACAAAATAGAAG
GGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTTAAAGCTTAATTTCTTTTCTAGATGGGAAGTACCAAACTCCATGAATGGCTGTAACGAATTG
TCAGGATTATGTCTTACTTCCTGAGTAATCCAATGTGCTTGCTCATGGTTACTGGTTATTTTAGAGTACAGGAACAAGTTTTGGCTTTATGAGATGAAAGTTGGCTTCAT
CATGAGTATGAAAATTACAGTACTCCCCTCTCCTTCATCCCGTTGAGCTTCGACAAATGAAAACTAATTAATTTAGACACAGCCAAGGAAGCCAAGATATTTTCAGTAGC
TTCGATTGAAGGAAGAATTGATGCCGAACTGTCAAATTCTGCACTCTCCAGCTGCTGGTGTAACTGCAGACACAAACGAGAAACAGAAACACATAAAGACACCAATATGG
AGTGTAATTAACACAACAATGAACAATCTAGTCAGATTGCAATTTGTTCATCGTTTTACTCTAAATAGTTCATGTCGAAAAATATTCGGTTCTCATTGCTATGTGAATTG
AAGGAGAAAACTGCAAACCTTCTCGAGAATGACAGATTGATCATCTGATTGTAGCTCGCGCATGAGTTTCAGCATCTCCAGTTGCTGTAGGAAGATTACATTCCAGTTAA
GAATTGCTTTCAATAAATGTGGGAATTAAAGGTTGTCACCTTACCTTTTCATGTAGTTGTTGTTGATTATGCATTTTTTCAGCAAACTCATCTGGTTCAAGCTCTGCTTC
ATCACATGCCATCTCCTCCCTATCATTTTTTCAGCATAATAATTTCATTTAATCCATGAGCTATAGAGTTCAGTGAAAATAACAAGTTCAGAACGAAGACAAAC
Protein sequenceShow/hide protein sequence
MRGKLKPFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNEAAPETIMDAIDSVFDPL
REFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG