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Lsi08G000060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G000060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein FAM133 isoform X2
Genome locationchr08:172024..172464
RNA-Seq ExpressionLsi08G000060
SyntenyLsi08G000060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141572.1 protein FAM133 [Cucumis sativus]6.9e-2095.95Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVKN
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
XP_008459690.1 PREDICTED: protein FAM133 isoform X1 [Cucumis melo]2.6e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
XP_008459691.1 PREDICTED: protein FAM133 isoform X2 [Cucumis melo]2.6e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
XP_008459692.1 PREDICTED: protein FAM133 isoform X3 [Cucumis melo]2.6e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
XP_038889692.1 corepressor interacting with RBPJ 1-like isoform X1 [Benincasa hispida]1.4e-1793.24Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK S SSSSSSSSDSSSSDEEERES+RSKSKSKRSKREKKH+SRTKHSSSDN EEADGPVPLSRFFEKVKN
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
TrEMBL top hitse value%identityAlignment
A0A0A0KWA3 Uncharacterized protein3.4e-2095.95Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVKN
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
A0A1S3CAA6 protein FAM133 isoform X21.3e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
A0A1S3CAV9 protein FAM133 isoform X31.3e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
A0A1S3CBZ8 protein FAM133 isoform X11.3e-1994.59Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRK SE SSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEE DGPVPLSRFFEKVK+
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
A0A6J1HQH4 protein FAM133-like9.1e-1893.24Show/hide
Query:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        HSKRKSSESSSSSSSSDSSSSDEEERESRRSKS+SKRSKREKKHRSR+K SSSD +EEADGPVPLSRFFEKVKN
Subjt:  HSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G59800.1 unknown protein5.5e-0758.9Show/hide
Query:  SKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN
        SK+K S+     SSS+SSSS +E+ ESRRS+S SKRSK+EKKH+S     SS ++ E DGPVPLSRFF  +KN
Subjt:  SKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATTCCAAGAGGAAATCGTCTGAGTCTAGCTCCTCAAGTTCATCCTCTGATTCATCCAGCAGCGACGAAGAGGAAAGAGAATCTAGAAGATCCAAGTCCAAATC
AAAGAGATCTAAGAGGGAGAAGAAGCATAGGTCGAGAACCAAGCACTCTTCCAGTGACAATGAAGAAGAGGCAGATGGTCCTGTGCCACTTTCAAGATTCTTTGAGAAAG
TGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCATTCCAAGAGGAAATCGTCTGAGTCTAGCTCCTCAAGTTCATCCTCTGATTCATCCAGCAGCGACGAAGAGGAAAGAGAATCTAGAAGATCCAAGTCCAAATC
AAAGAGATCTAAGAGGGAGAAGAAGCATAGGTCGAGAACCAAGCACTCTTCCAGTGACAATGAAGAAGAGGCAGATGGTCCTGTGCCACTTTCAAGATTCTTTGAGAAAG
TGAAGAATTAA
Protein sequenceShow/hide protein sequence
MTHSKRKSSESSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSSDNEEEADGPVPLSRFFEKVKN