; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G000150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G000150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionC2 domain-containing protein
Genome locationchr08:342754..387875
RNA-Seq ExpressionLsi08G000150
SyntenyLsi08G000150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9DUX8 Uncharacterized protein3.4e-0538.61Show/hide
Query:  TRPCSFAILNLFLSTMVATNIEMADTTNPVPIRCSVVIPDCIPITIE-SGT----------------NESSAAAGMIKPEKMDLSIVAPCLVKNVESCAN
        TRP S A+ + F+ST  AT     D   PVPIRCS+V+P+ +P+T+  +GT                   SAA G    E    S VA C V +V  CAN
Subjt:  TRPCSFAILNLFLSTMVATNIEMADTTNPVPIRCSVVIPDCIPITIE-SGT----------------NESSAAAGMIKPEKMDLSIVAPCLVKNVESCAN

Query:  T
        T
Subjt:  T
U7DUE1 C2 domain-containing protein2.9e-0450.82Show/hide
Query:  ITIESGTNESSAAAGMIKPEKMDLSIVAPCLVKNVESCANTIANTRTVIHTGKILRTAFAS
        ITI     + S A G++KP+ + LS++APC+VKNVE CA+T+A  R V   G  L TAFAS
Subjt:  ITIESGTNESSAAAGMIKPEKMDLSIVAPCLVKNVESCANTIANTRTVIHTGKILRTAFAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAAGTCCCTCTTCTTCCTCTAAAGAGGCCAAGAGGACGTGGTGGGTTGGGGGCTCAATATGCCCAGTTGAGGAAAAAGGCCACCAGAATTAGTCTGATCAAAAC
AAAAATTGCCACAGGAAGCATTCGACCCCAAGGAGAAAATGTCGTTTTCGATGGCCATGGCCTATCGACTAGACCGTGTTCGTTTGCCATTCTTAATCTTTTCCTCTCAA
CCATGGTTGCAACCAACATTGAAATGGCAGACACAACCAACCCAGTTCCTATACGCTGCAGTGTTGTGATACCAGATTGTATTCCTATAACGATCGAAAGTGGAACAAAT
GAATCGAGTGCAGCAGCAGGAATGATAAAGCCTGAAAAAATGGATCTGTCCATTGTAGCTCCTTGCTTGGTGAAGAATGTTGAATCCTGTGCAAACACAATAGCAAATAC
AAGGACTGTAATCCATACTGGAAAAATTCTAAGAACTGCCTTTGCTTCTTCAACCTCGCTGACACTACACATCATTCCACATTTGTTGGAATCCTTTGGCACAATGCAAG
CTTTGTTAAGAAACCTGCCACATTTGAGGATCCAACTATTACACAAATACTCGACCAATTCTCAGAAATGGGGTCTTATCATACGTTTTGATGCTATAACGATATGTTTT
GGTCCCAAATACAAACAAAAAGGAAGCAATCAGCATCATAATACAAGGAATTCCAAATCCCAAACTCCAACTAAGATTCTCCTCTGTATATGTAACCACCAAAATGGCTA
CAAAGGGCATCGAATTGATCGGCTCCAAAAGCCTGTACGCAAGGCTTGTGCCCACCTTGGCCTATCCCAATTAAATATAGGGAGACGAAGAAGAAGAGAAGCTGAAACTG
GGGAGAAATGGTTGGAGAAAGCAAAGCAGAGAAAGAGAGGAATGAGAGTCCCTAAGGAATCGGCGAGAAAAGCTCCGAGAAGAGTGAGAAGCATGGAGATGCCTGACCAG
ATGTTAACAGTCTCGGCGGCGGTGGCTACAGACTGGCCGAGTGGGCTGGTTAGAGGCGGACCTCCAACCACCGGAGCTCAGTCGGAAGACTGGCTGACCTTTGAAATCCA
CGGCGCCGTCCACAGTCTGGCTGAGAAAAGGAGAAGAGGTTTCTTGAATTCCTTTAAAGGGCTCATTATCCGGAGGACCAATGTTGAGATCAAAAATCGCTTTTGCGTTC
AGAAGCCGCGAGTCGCCCAGCCGTCGCGCACCGCCAGCAACCGCCGCTCGCCGTCCGTGCACCTGCACCAGCTCGCCGGTCGCGTCGCTCCAGCTGCCGCGCGACCCCGC
CGCCTCCTCCACTGCCGCGCGCCGGTTGCCCAGCCGCTCGTCGGCGGTTGTGAACCGCCATTGAAAAATGTAAAAAAACTCGCAAGATATGACTTAAATAAGATGGCGGT
TGAGAACCGCCATCTAAACCGAAGGAGAAACTGGGATTGTCTGCACGCAACAATTTTAATATCTCGACTTCTCGGTGGCTTGATCCCGACTGAAGCAGCATCTCACGGCA
GAGGGAGCCAACTTGGCAGATGGAGGCGACTTGGACGAACCACGACAGAAGCTTCCATAGACGGCAACTTGAACTACTGTAGACGGCGGCTTGCGCTTGGACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAAGTCCCTCTTCTTCCTCTAAAGAGGCCAAGAGGACGTGGTGGGTTGGGGGCTCAATATGCCCAGTTGAGGAAAAAGGCCACCAGAATTAGTCTGATCAAAAC
AAAAATTGCCACAGGAAGCATTCGACCCCAAGGAGAAAATGTCGTTTTCGATGGCCATGGCCTATCGACTAGACCGTGTTCGTTTGCCATTCTTAATCTTTTCCTCTCAA
CCATGGTTGCAACCAACATTGAAATGGCAGACACAACCAACCCAGTTCCTATACGCTGCAGTGTTGTGATACCAGATTGTATTCCTATAACGATCGAAAGTGGAACAAAT
GAATCGAGTGCAGCAGCAGGAATGATAAAGCCTGAAAAAATGGATCTGTCCATTGTAGCTCCTTGCTTGGTGAAGAATGTTGAATCCTGTGCAAACACAATAGCAAATAC
AAGGACTGTAATCCATACTGGAAAAATTCTAAGAACTGCCTTTGCTTCTTCAACCTCGCTGACACTACACATCATTCCACATTTGTTGGAATCCTTTGGCACAATGCAAG
CTTTGTTAAGAAACCTGCCACATTTGAGGATCCAACTATTACACAAATACTCGACCAATTCTCAGAAATGGGGTCTTATCATACGTTTTGATGCTATAACGATATGTTTT
GGTCCCAAATACAAACAAAAAGGAAGCAATCAGCATCATAATACAAGGAATTCCAAATCCCAAACTCCAACTAAGATTCTCCTCTGTATATGTAACCACCAAAATGGCTA
CAAAGGGCATCGAATTGATCGGCTCCAAAAGCCTGTACGCAAGGCTTGTGCCCACCTTGGCCTATCCCAATTAAATATAGGGAGACGAAGAAGAAGAGAAGCTGAAACTG
GGGAGAAATGGTTGGAGAAAGCAAAGCAGAGAAAGAGAGGAATGAGAGTCCCTAAGGAATCGGCGAGAAAAGCTCCGAGAAGAGTGAGAAGCATGGAGATGCCTGACCAG
ATGTTAACAGTCTCGGCGGCGGTGGCTACAGACTGGCCGAGTGGGCTGGTTAGAGGCGGACCTCCAACCACCGGAGCTCAGTCGGAAGACTGGCTGACCTTTGAAATCCA
CGGCGCCGTCCACAGTCTGGCTGAGAAAAGGAGAAGAGGTTTCTTGAATTCCTTTAAAGGGCTCATTATCCGGAGGACCAATGTTGAGATCAAAAATCGCTTTTGCGTTC
AGAAGCCGCGAGTCGCCCAGCCGTCGCGCACCGCCAGCAACCGCCGCTCGCCGTCCGTGCACCTGCACCAGCTCGCCGGTCGCGTCGCTCCAGCTGCCGCGCGACCCCGC
CGCCTCCTCCACTGCCGCGCGCCGGTTGCCCAGCCGCTCGTCGGCGGTTGTGAACCGCCATTGAAAAATGTAAAAAAACTCGCAAGATATGACTTAAATAAGATGGCGGT
TGAGAACCGCCATCTAAACCGAAGGAGAAACTGGGATTGTCTGCACGCAACAATTTTAATATCTCGACTTCTCGGTGGCTTGATCCCGACTGAAGCAGCATCTCACGGCA
GAGGGAGCCAACTTGGCAGATGGAGGCGACTTGGACGAACCACGACAGAAGCTTCCATAGACGGCAACTTGAACTACTGTAGACGGCGGCTTGCGCTTGGACAATAG
Protein sequenceShow/hide protein sequence
MLKVPLLPLKRPRGRGGLGAQYAQLRKKATRISLIKTKIATGSIRPQGENVVFDGHGLSTRPCSFAILNLFLSTMVATNIEMADTTNPVPIRCSVVIPDCIPITIESGTN
ESSAAAGMIKPEKMDLSIVAPCLVKNVESCANTIANTRTVIHTGKILRTAFASSTSLTLHIIPHLLESFGTMQALLRNLPHLRIQLLHKYSTNSQKWGLIIRFDAITICF
GPKYKQKGSNQHHNTRNSKSQTPTKILLCICNHQNGYKGHRIDRLQKPVRKACAHLGLSQLNIGRRRRREAETGEKWLEKAKQRKRGMRVPKESARKAPRRVRSMEMPDQ
MLTVSAAVATDWPSGLVRGGPPTTGAQSEDWLTFEIHGAVHSLAEKRRRGFLNSFKGLIIRRTNVEIKNRFCVQKPRVAQPSRTASNRRSPSVHLHQLAGRVAPAAARPR
RLLHCRAPVAQPLVGGCEPPLKNVKKLARYDLNKMAVENRHLNRRRNWDCLHATILISRLLGGLIPTEAASHGRGSQLGRWRRLGRTTTEASIDGNLNYCRRRLALGQ