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Lsi08G000380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G000380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter I family member 19-like
Genome locationchr08:918903..920965
RNA-Seq ExpressionLsi08G000380
SyntenyLsi08G000380
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034854.1 ABC transporter I family member 19-like [Cucumis melo var. makuwa]1.4e-0880Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD QLVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

KAG5567400.1 hypothetical protein RHGRI_002822 [Rhododendron griersonianum]1.8e-0874Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTL
        LA  HMVGGRD V VLNGS FHD  LVCSGDL YLG SWSK V S VS L
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTL

RYR25041.1 hypothetical protein Ahy_B02g058677 isoform B [Arachis hypogaea]6.2e-0970.59Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTLL
        LA  HMVGGRD V VLNGS FHD  LVCSGDL YLG SWSK + S VS+L+
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTLL

XP_008458101.1 PREDICTED: ABC transporter I family member 19-like [Cucumis melo]1.4e-0880Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD QLVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

XP_038899774.1 ABC transporter I family member 19-like [Benincasa hispida]1.4e-0880Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD QLVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

TrEMBL top hitse value%identityAlignment
A0A1S3C715 ABC transporter I family member 19-like6.7e-0980Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD QLVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

A0A287V3S9 Uncharacterized protein5.2e-0972Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTL
        LA  HMVGG+D V VLNGS FHD Q VCSGDL YLG SWS+ VSS VS+L
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTL

A0A445AF45 ABC transporter domain-containing protein3.0e-0970.59Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTLL
        LA  HMVGGRD V VLNGS FHD  LVCSGDL YLG SWSK + S VS+L+
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTVSTLL

A0A5D3BDX3 ABC transporter I family member 19-like6.7e-0980Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD QLVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

A0A6A5N5X0 Putative quaternary-amine-transporting ATPase3.3e-0877.78Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGGRD V VLNGS FHD +LVCSGDL YLG SWSK VSS
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

SwissProt top hitse value%identityAlignment
Q3EDJ0 ABC transporter I family member 191.4e-0868.89Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD QLVCSGDL YLG SWSK V S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

Q9XF19 ABC transporter I family member 219.4e-0864.44Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD +LVCSGDL YLG SWSK   S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

Arabidopsis top hitse value%identityAlignment
AT1G03905.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.0e-0968.89Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD QLVCSGDL YLG SWSK V S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

AT3G14390.1 Pyridoxal-dependent decarboxylase family protein2.9e-0463.33Show/hide
Query:  PPDAFFYGNGKLLEDFVLASDQGVFVNVDN
        P    F GNGK LED VLA+ +GVFVNVD+
Subjt:  PPDAFFYGNGKLLEDFVLASDQGVFVNVDN

AT5G44110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein6.7e-0964.44Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD +LVCSGDL YLG SWSK   S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

AT5G44110.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein6.7e-0964.44Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD +LVCSGDL YLG SWSK   S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS

AT5G44110.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein6.7e-0964.44Show/hide
Query:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS
        LA  HMVGG++ V VL+ S FHD +LVCSGDL YLG SWSK   S
Subjt:  LARIHMVGGRD-VGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGGTTGGCTCTTCATGCCGGCTTTGACCCCTCCAGATGCATTTTTTTATGGGAATGGTAAGCTTTTGGAGGATTTCGTTCTGGCTTCGGATCAAGGTGTTTT
TGTCAATGTGGATAATGTGGACCCTCAGGTATGGGTTCATAACTATTTATTATGGATGTGTGCTGCTGCTTTAATTGTTCAACAAGTCATACCATCGGAAAATTCAGACA
CCCTCAAGTATAGTGATATGTGGAGAAATGATATGTGGGAAAACGACTTTGCTGAAAATTTGGCCCGCATACATATGGTTGGAGGAAGAGATGTTGGGGTTCTAAATGGT
TCAACTTTTCATGATATTCAACTCGTATGTAGTGGTGATTTGGGCTACTTGGGAAGATCCTGGAGTAAAATCGTTAGCTCTACGGTTAGTACTTTACTTGCACTTCTCGT
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTGGTTGGCTCTTCATGCCGGCTTTGACCCCTCCAGATGCATTTTTTTATGGGAATGGTAAGCTTTTGGAGGATTTCGTTCTGGCTTCGGATCAAGGTGTTTT
TGTCAATGTGGATAATGTGGACCCTCAGGTATGGGTTCATAACTATTTATTATGGATGTGTGCTGCTGCTTTAATTGTTCAACAAGTCATACCATCGGAAAATTCAGACA
CCCTCAAGTATAGTGATATGTGGAGAAATGATATGTGGGAAAACGACTTTGCTGAAAATTTGGCCCGCATACATATGGTTGGAGGAAGAGATGTTGGGGTTCTAAATGGT
TCAACTTTTCATGATATTCAACTCGTATGTAGTGGTGATTTGGGCTACTTGGGAAGATCCTGGAGTAAAATCGTTAGCTCTACGGTTAGTACTTTACTTGCACTTCTCGT
TTAA
Protein sequenceShow/hide protein sequence
MSSGWLFMPALTPPDAFFYGNGKLLEDFVLASDQGVFVNVDNVDPQVWVHNYLLWMCAAALIVQQVIPSENSDTLKYSDMWRNDMWENDFAENLARIHMVGGRDVGVLNG
STFHDIQLVCSGDLGYLGRSWSKIVSSTVSTLLALLV