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Lsi08G000490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G000490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:1176090..1177919
RNA-Seq ExpressionLsi08G000490
SyntenyLsi08G000490
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010682 - Plant self-incompatibility response


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1225651.1 hypothetical protein CJ030_MR1G002309 [Morella rubra]4.3e-0535.37Show/hide
Query:  LLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGN--IPPKGCEC--IPNGVDSRFCRCNIIC
        L+  L+L L  ++HS   E ++K CP +  + G CS  FG S+C+    A+YG    PP  C+C  IP   +   C+C++ C
Subjt:  LLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGN--IPPKGCEC--IPNGVDSRFCRCNIIC

KAG6607501.1 hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2671.76Show/hide
Query:  KLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIICH
        KLI + LLSFLLL LVS SHS    DQSKTCP +F STGTC+   GISECY E+MAR GNIPPKGC+CIP+GVDSR CRCN++CH
Subjt:  KLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIICH

KAG6607502.1 hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2567.05Show/hide
Query:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC
        MEK  ++S  LLSFL+L LVS SHS    DQSKTCP +F STGTC    G+SECY E+MAR+GNIPPKGCECIP G DSR CRCN +C
Subjt:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC

KGN52689.1 hypothetical protein Csa_008701 [Cucumis sativus]5.3e-1966.67Show/hide
Query:  EDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC
        +DQ +TCPVKFASTGTC  P+G + CY E M +YGN PPK C+CIPNG +SRFC+CNI C
Subjt:  EDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC

KGN52690.1 hypothetical protein Csa_007932 [Cucumis sativus]3.6e-3682.95Show/hide
Query:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC
        MEK   ISLPLLSFLLLCL SI+HSQ+ EDQSKTCPVKFASTGTCS PFG+SECY EAMA+YGNIPPKGCECIP+G +SRFC CNIIC
Subjt:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC

TrEMBL top hitse value%identityAlignment
A0A0A0KSV3 Uncharacterized protein1.8e-3682.95Show/hide
Query:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC
        MEK   ISLPLLSFLLLCL SI+HSQ+ EDQSKTCPVKFASTGTCS PFG+SECY EAMA+YGNIPPKGCECIP+G +SRFC CNIIC
Subjt:  MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC

A0A0A0KUV4 Uncharacterized protein2.5e-1966.67Show/hide
Query:  EDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC
        +DQ +TCPVKFASTGTC  P+G + CY E M +YGN PPK C+CIPNG +SRFC+CNI C
Subjt:  EDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIIC

A0A6A1WK89 Uncharacterized protein2.1e-0535.37Show/hide
Query:  LLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGN--IPPKGCEC--IPNGVDSRFCRCNIIC
        L+  L+L L  ++HS   E ++K CP +  + G CS  FG S+C+    A+YG    PP  C+C  IP   +   C+C++ C
Subjt:  LLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGN--IPPKGCEC--IPNGVDSRFCRCNIIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACGAAGCTCATTTCCCTTCCTCTCTTATCTTTTCTTCTCCTATGCCTTGTTTCAATTTCTCATTCTCAAGAGTTTGAAGATCAATCAAAAACATGCCCAGT
GAAATTTGCTTCAACAGGGACATGTTCACGGCCGTTTGGAATCTCAGAATGCTACCAAGAAGCAATGGCAAGATATGGAAATATCCCACCAAAGGGTTGTGAATGCATTC
CTAATGGTGTTGACTCTCGCTTTTGCCGTTGCAATATTATTTGTCAC
mRNA sequenceShow/hide mRNA sequence
GTGTGTGATTATGGAGAAGACGAAGCTCATTTCCCTTCCTCTCTTATCTTTTCTTCTCCTATGCCTTGTTTCAATTTCTCATTCTCAAGAGTTTGAAGATCAATCAAAAA
CATGCCCAGTGAAATTTGCTTCAACAGGGACATGTTCACGGCCGTTTGGAATCTCAGAATGCTACCAAGAAGCAATGGCAAGATATGGAAATATCCCACCAAAGGGTTGT
GAATGCATTCCTAATGGTGTTGACTCTCGCTTTTGCCGTTGCAATATTATTTGTCAC
Protein sequenceShow/hide protein sequence
MEKTKLISLPLLSFLLLCLVSISHSQEFEDQSKTCPVKFASTGTCSRPFGISECYQEAMARYGNIPPKGCECIPNGVDSRFCRCNIICH