CuGenDBv2

Gene ID	Lsi08G000500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	LysM domain-containing protein
Genome location	chr08:1212161..1216348
RNA-Seq Expression	Lsi08G000500
Synteny	Lsi08G000500
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR018392 - LysM domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039254.1 uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa]

1.9e-114

69.72

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFS    LLPH TLPSLT                   RNWANT++SF NQ R I+                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS
        FQL D+SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTDLEQKGQNIKIQN RA   IRD +QLEEKLQSALNGL+ YKKLFA ASS
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS

Query:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQISVEDLSHAYKKLDQ
         LPPARTTSFIVLVPL++FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP  DEQISVEDLSHAYKKLDQ
Subjt:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQISVEDLSHAYKKLDQ

Query:  DYEKFLSECGLSKWGYWRGGTQRPEQE
        DYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  DYEKFLSECGLSKWGYWRGGTQRPEQE

XP_008459633.1 PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]

2.4e-114

69.42

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFS    LLPH TLPSLT                   RNWANT++SF NQ R I+                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS
        FQL D+SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNPR    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS

Query:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQ
         LPPARTTSFIVLVPL++FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVEDLSHAYKKLDQ
Subjt:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQ

Query:  DYEKFLSECGLSKWGYWRGGTQRPEQE
        DYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  DYEKFLSECGLSKWGYWRGGTQRPEQE

XP_011656102.1 uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus]

2.7e-113

69.51

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFSLLP   P S + SL+                    NWANT++SF NQ R IA                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQ-LQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP---RAIRDVYQLEEKLQSALNGLRNYKKLFAQAS
        FQ L DISK QLSTKH FVHI+EG ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQNP   R IR+ +QLEEKLQSALNGLR YKKLFA AS
Subjt:  FQ-LQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP---RAIRDVYQLEEKLQSALNGLRNYKKLFAQAS

Query:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD
        SH PPARTTSFIVLVPL++FCARCIIGAS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVE+LSHAYKKLD
Subjt:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD

Query:  QDYEKFLSECGLSKWGYWRGGTQRPEQE
        QDYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  QDYEKFLSECGLSKWGYWRGGTQRPEQE

XP_011656104.1 uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus]

2.7e-113

69.51

Show/hide

Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFSLLP   P S + SL+                    NWANT++SF NQ R IA                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQ-LQDISKDQLSTKHQFVHIIEG---RESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQAS
        FQ L DISK QLSTKH FVHI+EG    ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQNPR IR+ +QLEEKLQSALNGLR YKKLFA AS
Subjt:  FQ-LQDISKDQLSTKHQFVHIIEG---RESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQAS

Query:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD
        SH PPARTTSFIVLVPL++FCARCIIGAS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVE+LSHAYKKLD
Subjt:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD

Query:  QDYEKFLSECGLSKWGYWRGGTQRPEQE
        QDYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  QDYEKFLSECGLSKWGYWRGGTQRPEQE

XP_038890844.1 uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida]

5.6e-127

75.93

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVKLSQRNRADRF L PKLLP  TLPSLTH                  RNWANTR+S KNQFRAI                              LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLP
        FQLQDISK+QLSTKH  VHI+EG ESLT   NQNGDP HSI +ANK+I DTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALN LRNYKKLFA ASSHLP
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLP

Query:  PARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQDYE
        PARTTSFIVLVPLIVFCARCIIGAS ARVFGT +LETVDKREG+HHKFRSGHWRSALRDIRE+DGLDCESPIDS SP EDEQIS EDLSH YKKLDQDYE
Subjt:  PARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQDYE

Query:  KFLSECGLSKWGYWRGGTQRPEQE
        KFLSECGLSKWGYWRGGTQRPEQE
Subjt:  KFLSECGLSKWGYWRGGTQRPEQE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSX5 Uncharacterized protein

1.3e-113

69.51

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFSLLP   P S + SL+                    NWANT++SF NQ R IA                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQ-LQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP---RAIRDVYQLEEKLQSALNGLRNYKKLFAQAS
        FQ L DISK QLSTKH FVHI+EG ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQNP   R IR+ +QLEEKLQSALNGLR YKKLFA AS
Subjt:  FQ-LQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP---RAIRDVYQLEEKLQSALNGLRNYKKLFAQAS

Query:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD
        SH PPARTTSFIVLVPL++FCARCIIGAS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVE+LSHAYKKLD
Subjt:  SHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLD

Query:  QDYEKFLSECGLSKWGYWRGGTQRPEQE
        QDYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  QDYEKFLSECGLSKWGYWRGGTQRPEQE

A0A1S3CB50 uncharacterized protein LOC103498697 isoform X1

1.9e-112

67.76

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFS    LLPH TLPSLT                   RNWANT++SF NQ R I+                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS
        FQL D+SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNPR    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS

Query:  HLPP--------ARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLS
         LPP        ARTTSFIVLVPL++FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVEDLS
Subjt:  HLPP--------ARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLS

Query:  HAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
        HAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  HAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE

A0A1S3CBV5 uncharacterized protein LOC103498697 isoform X2

1.2e-114

69.42

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFS    LLPH TLPSLT                   RNWANT++SF NQ R I+                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS
        FQL D+SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNPR    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS

Query:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQ
         LPPARTTSFIVLVPL++FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQISVEDLSHAYKKLDQ
Subjt:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVEDLSHAYKKLDQ

Query:  DYEKFLSECGLSKWGYWRGGTQRPEQE
        DYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  DYEKFLSECGLSKWGYWRGGTQRPEQE

A0A5A7T6Z4 LysM domain-containing protein

9.0e-115

69.72

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        MEVK+ QRNRA RFS    LLPH TLPSLT                   RNWANT++SF NQ R I+                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS
        FQL D+SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTDLEQKGQNIKIQN RA   IRD +QLEEKLQSALNGL+ YKKLFA ASS
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA---IRDVYQLEEKLQSALNGLRNYKKLFAQASS

Query:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQISVEDLSHAYKKLDQ
         LPPARTTSFIVLVPL++FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP  DEQISVEDLSHAYKKLDQ
Subjt:  HLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQISVEDLSHAYKKLDQ

Query:  DYEKFLSECGLSKWGYWRGGTQRPEQE
        DYEKFLSECGLSKWGYWRGGTQRPEQE
Subjt:  DYEKFLSECGLSKWGYWRGGTQRPEQE

A0A6J1CKQ6 uncharacterized protein LOC111012032 isoform X3

3.3e-101

65.52

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Query:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR
        ME+K+SQRNRADRFSLLPKLLP  TLPS TH                  R WA  +RS KNQF A+A                             LRWR
Subjt:  MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWR

Query:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLP
        FQLQDI +DQ  TKH FV I+EG E+ TSI  QNG   HSIVI N+KI DTDLE KGQ+ KI+NP AIRDVYQL+EKLQS+LNGL+NYKKLF   S  LP
Subjt:  FQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLP

Query:  PARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPID---SSSPE-DEQISVEDLSHAYKKLDQ
        PARTTSFIVLVPLIVFCARCIIGAS ARV  T KL+T+DK EGEHHKFRSGHWRSALRDIRE+DGLD ES  D   S+SP  DEQISVEDLSHAYKKLD+
Subjt:  PARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPID---SSSPE-DEQISVEDLSHAYKKLDQ

Query:  DYEKFLSECGLSKWGYWRG
        DYEKFLSECGLS  GYWRG
Subjt:  DYEKFLSECGLSKWGYWRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G09970.1 unknown protein

1.6e-10

27.47

Show/hide

Query:  RWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANKKIMDTDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNG
        R RF +Q +S+++  TKH+     +  ESL  I  Q G    +P  S    + ++ D D E+K   +         K+     + D+ ++E+  ++    
Subjt:  RWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANKKIMDTDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNG

Query:  LRNYKKLFAQASSHLPPARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHWRSALRDIRE---VDGLDCESP-IDSSS
        +     L  Q    LP   T   +  L+P++ FC  CIIG           L T+  R   +G HH   S  WR+AL D  E    DG D  SP    +S
Subjt:  LRNYKKLFAQASSHLPPARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHWRSALRDIRE---VDGLDCESP-IDSSS

Query:  PEDEQISVEDLSHAYKKLDQDYEKFLSECGLSK
           E  + ++++ AY +++ +Y++FL ECG+ +
Subjt:  PEDEQISVEDLSHAYKKLDQDYEKFLSECGLSK

AT4G09970.2 unknown protein

1.7e-09

27.39

Show/hide

Query:  RWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANKKIMDTDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNG
        +W F +Q +S+++  TKH+     +  ESL  I  Q G    +P  S    + ++ D D E+K   +         K+     + D+ ++E+  ++    
Subjt:  RWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANKKIMDTDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNG

Query:  LRNYKKLFAQASSHLPPARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-D
        +     L  Q    LP   T   +  L+P++ FC  CIIG           L T+  R   +G HH   S  WR+AL D  E    D     DS SPE  
Subjt:  LRNYKKLFAQASSHLPPARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-D

Query:  EQISVEDLSHAYKKLDQDYEKFLSECGLSK
        E  + ++++ AY +++ +Y++FL ECG+ +
Subjt:  EQISVEDLSHAYKKLDQDYEKFLSECGLSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTCCCACACTCGACTCTCCCTTCTCTAACTCACAGAAACTTACACAACTT
GCTTTGCTTTTGTGCTTTTCCCTCCAATTTCTACCCCAGAAATTGGGCCAACACCAGAAGATCATTCAAGAATCAATTCAGAGCCATTGCTATGACCCAGATATTGATGG
GTGATTTATGGTTTGAATTTCTTTTGAAACCTCTTTTCCGAGGATGTTTTGAGATTGTAAAGATTGAGTTAAGATGGAGGTTTCAACTTCAAGATATATCCAAAGATCAA
CTCTCCACCAAGCACCAGTTTGTTCATATTATAGAAGGGAGGGAGAGCTTGACTTCAATTTCAAATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAA
GATAATGGACACGGATCTAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTAGAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATG
GACTTCGAAACTATAAGAAGCTTTTCGCGCAAGCCTCCTCTCATCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGC
ATAATTGGTGCCTCTTCTGCTAGAGTTTTCGGAACATTGAAGCTTGAAACCGTTGATAAACGAGAGGGAGAACATCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCT
TCGTGATATAAGGGAAGTGGATGGTTTGGATTGTGAGTCCCCTATAGATTCTTCAAGTCCAGAAGATGAACAGATCTCAGTAGAAGATTTATCACATGCTTACAAGAAAC
TGGACCAGGATTACGAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAGGAATAG

mRNA sequence

Show/hide mRNA sequence

ATTGAATTTAATGAGAGAGAAAATGGCAATGTCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAG
TTGCTCCCACACTCGACTCTCCCTTCTCTAACTCACAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTCCCTCCAATTTCTACCCCAGAAATTGGGCCAACACCAG
AAGATCATTCAAGAATCAATTCAGAGCCATTGCTATGACCCAGATATTGATGGGTGATTTATGGTTTGAATTTCTTTTGAAACCTCTTTTCCGAGGATGTTTTGAGATTG
TAAAGATTGAGTTAAGATGGAGGTTTCAACTTCAAGATATATCCAAAGATCAACTCTCCACCAAGCACCAGTTTGTTCATATTATAGAAGGGAGGGAGAGCTTGACTTCA
ATTTCAAATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCG
AGCGATTAGAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTTCGCGCAAGCCTCCTCTCATCTACCTCCTGCTA
GAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTCTGCTAGAGTTTTCGGAACATTGAAGCTTGAAACCGTTGAT
AAACGAGAGGGAGAACATCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAAGTGGATGGTTTGGATTGTGAGTCCCCTATAGATTCTTCAAG
TCCAGAAGATGAACAGATCTCAGTAGAAGATTTATCACATGCTTACAAGAAACTGGACCAGGATTACGAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACT
GGCGTGGGGGTACCCAGAGACCTGAACAGGAATAGGCAATATTTTTAGCACTTTTCTGGGTTTCTTGGCCAGCCAAAAGGGGCTAGGCTATGGAGTTGTGAGTTCTCTAG
GAGAAAGATGCCTAGCAACAGTTTTTCTTGTGTATTCCGGTTCTGGTAGAGTAAATTTTCAACAACCCAACTGATGTAATTAAACTTGAAGTTGGACAAAATTTATGCAT
AATGCATCCCATTTACAACAACTCTTCACAATGTTTGAATCCAAATACACTTGATTACAGATAATGCATCAAATTCCCAGCCATTTCCCTTCTCCACTTAACGAACGCGG
CGAGCTTTCTCTTCCTGCCCCAGGCCTAGTGATTTCT

Protein sequence

Show/hide protein sequence

MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNLHNLLCFCAFPSNFYPRNWANTRRSFKNQFRAIAMTQILMGDLWFEFLLKPLFRGCFEIVKIELRWRFQLQDISKDQ
LSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARC
IIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE

Lsi08G000500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome