CuGenDBv2

Gene ID	Lsi08G000690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	chr08:1456143..1463193
RNA-Seq Expression	Lsi08G000690
Synteny	Lsi08G000690
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0e+00

94.42

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQ VFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQ VEGAN+ ILDNANLPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKT
        NDRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDS+QMNNVTKT
Subjt:  NDRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKT

Query:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY  NRY CDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        DPQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+GVGG L
Subjt:  DPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

XP_008459609.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]

0.0e+00

94.56

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQ VEGAN+ ILDNANLPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDS+QMNNVTKTQ
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY  NRY CDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+GVGG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

XP_011656092.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus]

0.0e+00

95.17

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQS Q VEGAN+ IL+NA+LPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD +QMNNVTKTQ
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYS NRY CDLADLPV ILLQVASQ ILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLC+GVGG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

XP_022145057.1 mediator of RNA polymerase II transcription subunit 17 [Momordica charantia]

0.0e+00

92.75

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP+NSCHS+RFGFLSGCNVENPL+RGKNESTNSSNQSS+  E EFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQ TSVFISLVPS +SCQ V+GANT ILDN NLPFDSLDGIEL DRSD LEKKLRNPNHI FEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPIS+LSRQ  Q SNDG GLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD HQM NVTK+Q
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAPNVVGL  GNSK+IYSMNRYGCDLADLPV ILLQVA Q ILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
         QGCLSWWLVMDDDLMEDRKLNFD SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+G GG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0e+00

95.02

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRV+HDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+RGKNESTNSSNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQ VEGANTGILDNANLPFDSLDGIEL DRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRP S+LSRQSGQ +NDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQA TSD+HQMNN+TK+Q
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+SMNRYGCDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMED+KL+FDSSDV+PEYRKFLGHLSLEVLHSTLMDLVSLC+GVG  L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

95.17

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQS Q VEGAN+ IL+NA+LPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD +QMNNVTKTQ
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYS NRY CDLADLPV ILLQVASQ ILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLC+GVGG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

94.56

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQ VEGAN+ ILDNANLPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDS+QMNNVTKTQ
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY  NRY CDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+GVGG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

94.42

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQ VFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQ VEGAN+ ILDNANLPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKT
        NDRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDS+QMNNVTKT
Subjt:  NDRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKT

Query:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY  NRY CDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        DPQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+GVGG L
Subjt:  DPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

94.56

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQ VEGAN+ ILDNANLPFDSLDGIEL DRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPISSLSRQSGQ SNDG GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDS+QMNNVTKTQ
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY  NRY CDLADLPV ILLQVASQ ILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
        PQGCLSWWLVMDD LMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+GVGG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

92.75

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP+NSCHS+RFGFLSGCNVENPL+RGKNESTNSSNQSS+  E EFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQ TSVFISLVPS +SCQ V+GANT ILDN NLPFDSLDGIEL DRSD LEKKLRNPNHI FEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ
        DRPIS+LSRQ  Q SNDG GLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD HQM NVTK+Q
Subjt:  DRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAPNVVGL  GNSK+IYSMNRYGCDLADLPV ILLQVA Q ILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL
         QGCLSWWLVMDDDLMEDRKLNFD SDVVPEYRKFLG+LSLEVLHSTLMDLVSLC+G GG L
Subjt:  PQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGGRL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

2.7e-211

58.27

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQGSND-GFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNV
        K+ D+  S   R S Q   D   GLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D  +    
Subjt:  KSNDRPISSLSRQSGQGSND-GFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNV

Query:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV DDCI++E E  PNVVGL   +S +++S+N+Y CD+ADLPV IL QVASQ + WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++   E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

1.9e-212

58.27

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQGSND-GFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNV
        K+ D+  S   R S Q   D   GLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D  +    
Subjt:  KSNDRPISSLSRQSGQGSND-GFGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNV

Query:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV DDCI++E E  PNVVGL   +S +++S+N+Y CD+ADLPV IL QVASQ + WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTILLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++   E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGAAGACATGAAGGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAACGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACAAGG
CCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTT
GGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTCATCGTGTGACCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATT
AATTTACCTACAAATTCATGTCATTCCCTTCGTTTTGGATTTCTGAGTGGATGTAATGTGGAAAATCCTCTGGATCGCGGTAAAAATGAGTCTACAAATTCTTCCAATCA
GTCTTCCATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTG
ATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAGAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCT
CTTGTGCCATCTGGTCAAAGTTGCCAAGCAGTTGAAGGTGCAAATACTGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACTAGATAG
AAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTTCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCA
TTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTTTGGGCTTCTTGGTCATTTCTGTTTGTCTTTGGCTCACAGAATGTTTGCAAACAATGTTCTCATG
GAGCTCGAAAATGTGGTTTGGAAAGTCCCGTTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCGTCGTGGACGTTTTTTATGGAAGTTCCTCGGTCCAT
ACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTAACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTA
TCGAAGGGGAAGGTGCGCCTAATGTCGTTGGCTTGTTCAACGGAAATTCCAAGGATATCTATTCGATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTACAATT
CTGTTGCAGGTTGCGAGCCAAACTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAAGG
TGAAACACTCCGGCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTAGTAATGGACGATGACTTGATGGAGGACAGGAAACTTAATTTTG
ACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGTCATTTATCTCTAGAAGTGTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAATGGAGTTGGTGGT
AGACTATAA

mRNA sequence

Show/hide mRNA sequence

CATATGTATATCCAAAATTTCAGGGACAAATCCGTCATTTCGATTTTCTGCGGTCATCGGCTGAGCCCTCTGTCAGTGAACTTTCATCCCGATCGCGGACTTGTCTTCCA
TTCTAGGGCTCGCTCCAAACCTTTTCAATCCCGACATTATTCCGGGAAAATACTGTGTGAATATGGACGAAGACATGAAGGTCTCTCTCGACAAGCTTCCCGTCAAGCGC
TTGGAGGCCATAGAAGAGAACGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAA
GGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTA
TCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTA
GCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCG
ATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGACCCTTCGTCTG
TGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTACCTACAAATTCATGTCATTCCCTTCGTTTTGGATTTCTGAGT
GGATGTAATGTGGAAAATCCTCTGGATCGCGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCCATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACAT
TAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGA
CTGGCATACGAGAGAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAGCAGTTGAAGGTGCAAATACT
GGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACTAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTT
TGAGATATATCTGCAACAAATTTTTCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTTTG
GGCTTCTTGGTCATTTCTGTTTGTCTTTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCGTTTCTTCAGTTGATATCT
CATCCCACTTGGAATTCTCGAAAATCGTCGTGGACGTTTTTTATGGAAGTTCCTCGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGAT
GAATAATGTAACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCGCCTAATGTCGTTGGCTTGTTCAACGGAAATT
CCAAGGATATCTATTCGATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTACAATTCTGTTGCAGGTTGCGAGCCAAACTATTCTTTGGCTTCATGAGGAAGCT
CTAACCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGGCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGG
ATGCCTTTCTTGGTGGTTAGTAATGGACGATGACTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGTCATTTAT
CTCTAGAAGTGTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAATGGAGTTGGTGGTAGACTATAACCATGCCTTTCTTGTTTGGTATTACTAATAGAAATTGCA
TTGGTTCTTGTAAGGTGGATGGCAAACTAAGGATATGATTTAAAGTTACAATTAGAAACTACGTAGAGAGACTGGAAAATGCAAGAGAAAGAAGGTGAGAATGAAAGGAA
TCGGATTTGTCTAATCTTTTTTCTTTATAGTCAACCTTTTTTTCCCCCTTTCGGGGGTGGTCGTGGTTCTACAGTGCGTTGGGGGAAAAGATGAGAACGAAATGAGGGAA
ATTTTCTTCCTTCTATTGAAAATTTTAGTGTGAGAGTTCTACTCTACATTGGAGAGGAAGGTGCAAGGTGCATGAAATTGCTTGATTCTATAGAGATGGAGATGGAGGAA
AGAGAACCAGAGAGAGA

Protein sequence

Show/hide protein sequence

MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAI
NLPTNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFIS
LVPSGQSCQAVEGANTGILDNANLPFDSLDGIELLDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQGSNDGFGLLGHFCLSLAHRMFANNVLM
ELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSMNRYGCDLADLPVTI
LLQVASQTILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDDLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCNGVGG
RL

Lsi08G000690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome