; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G000760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G000760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEnzymatic polyprotein
Genome locationchr08:1612893..1613506
RNA-Seq ExpressionLsi08G000760
SyntenyLsi08G000760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.2e-2440.45Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S +Q+++++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SSKK                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI
                             KGHYA+RCPL  K+N+L IDE+ KQSLL+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   I
Subjt:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI

Query:  PST-----EC---IKVLTKD
        P T     +C   I V+TKD
Subjt:  PST-----EC---IKVLTKD

KAA0057417.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.1e-2540.64Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQEMSPSKKKKR--SSKKLL--------------------
        M+EN    QI+   LTYGDI+S +Q++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q     KKKK+  SSKK                      
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQEMSPSKKKKR--SSKKLL--------------------

Query:  -------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VIP
                            KGHYA+RCPL  K+N+L IDE  KQS+L+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   IP
Subjt:  -------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VIP

Query:  ST-----EC---IKVLTKD
         T     +C   I V+TKD
Subjt:  ST-----EC---IKVLTKD

KAA0068171.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-2541.28Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S IQ++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SS+K                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS
                           KGHYA+RCPL  K+N+L +DE+ KQSLL+AI  + ++ETSS   S +EE  +N +  E+SSFE E    S   DD   IP 
Subjt:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS

Query:  T-----EC---IKVLTKD
        T     +C   I V+TKD
Subjt:  T-----EC---IKVLTKD

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.2e-2440.45Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S +Q+++++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SSKK                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI
                             KGHYA+RCPL  K+N+L IDE+ KQSLL+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   I
Subjt:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI

Query:  PST-----EC---IKVLTKD
        P T     +C   I V+TKD
Subjt:  PST-----EC---IKVLTKD

TYK21091.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-2541.28Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S IQ++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SS+K                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS
                           KGHYA+RCPL  K+N+L +DE+ KQSLL+AI  + ++ETSS   S +EE  +N +  E+SSFE E    S   DD   IP 
Subjt:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS

Query:  T-----EC---IKVLTKD
        T     +C   I V+TKD
Subjt:  T-----EC---IKVLTKD

TrEMBL top hitse value%identityAlignment
A0A5A7UF59 Enzymatic polyprotein5.8e-2540.45Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S +Q+++++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SSKK                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI
                             KGHYA+RCPL  K+N+L IDE+ KQSLL+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   I
Subjt:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI

Query:  PST-----EC---IKVLTKD
        P T     +C   I V+TKD
Subjt:  PST-----EC---IKVLTKD

A0A5A7URX9 Enzymatic polyprotein3.4e-2540.64Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQEMSPSKKKKR--SSKKLL--------------------
        M+EN    QI+   LTYGDI+S +Q++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q     KKKK+  SSKK                      
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQEMSPSKKKKR--SSKKLL--------------------

Query:  -------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VIP
                            KGHYA+RCPL  K+N+L IDE  KQS+L+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   IP
Subjt:  -------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VIP

Query:  ST-----EC---IKVLTKD
         T     +C   I V+TKD
Subjt:  ST-----EC---IKVLTKD

A0A5A7VRE0 Reverse transcriptase5.3e-2641.28Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S IQ++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SS+K                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS
                           KGHYA+RCPL  K+N+L +DE+ KQSLL+AI  + ++ETSS   S +EE  +N +  E+SSFE E    S   DD   IP 
Subjt:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS

Query:  T-----EC---IKVLTKD
        T     +C   I V+TKD
Subjt:  T-----EC---IKVLTKD

A0A5D3BG41 Enzymatic polyprotein5.8e-2540.45Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S +Q+++++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SSKK                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI
                             KGHYA+RCPL  K+N+L IDE+ KQSLL+AI  + +++TSS   S +EE  +N + E+ SS E E    S   DD   I
Subjt:  --------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEIVED-SSFEAESSDSSQCLDD--VI

Query:  PST-----EC---IKVLTKD
        P T     +C   I V+TKD
Subjt:  PST-----EC---IKVLTKD

A0A5D3DBS1 Reverse transcriptase5.3e-2641.28Show/hide
Query:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------
        M+ N    QI+   LTYGDI+S IQ++ ++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q   E    KKK+ SS+K                     
Subjt:  MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ---EMSPSKKKKRSSKKLL-------------------

Query:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS
                           KGHYA+RCPL  K+N+L +DE+ KQSLL+AI  + ++ETSS   S +EE  +N +  E+SSFE E    S   DD   IP 
Subjt:  ------------------TKGHYASRCPLTRKVNSLEIDEDLKQSLLFAICDKEEEETSSSEGSLAEEGIVNEI-VEDSSFEAESSDSSQCLDD--VIPS

Query:  T-----EC---IKVLTKD
        T     +C   I V+TKD
Subjt:  T-----EC---IKVLTKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAAACTTTGAAGGCGGACAAATTAACAGGAATGTTCTCACCTATGGAGACATTACCAGCAACATTCAAGTGTTATCCTTAAGTCTTTGTAAGGACAAC
AAGCATAATCAAAGAATAATAAAAGACGCAGACTACCGAAAAGAACTGGGAACGTTCTGCAAACAATATGGCGTAGAGCAAGAAATGTCACCATCAAAGAAGAAG
AAAAGATCTTCAAAGAAGCTGTTAACAAAAGGTCATTACGCTAGTCGATGTCCCCTAACAAGAAAGGTCAACAGTCTAGAAATAGACGAAGATCTGAAGCAATCT
CTTCTCTTTGCCATTTGCGACAAAGAAGAAGAAGAAACGTCATCCTCAGAAGGATCACTCGCTGAAGAAGGAATAGTCAATGAAATAGTAGAAGATTCCTCTTTC
GAAGCAGAATCTTCTGACTCTTCTCAATGTTTAGACGATGTTATCCCTAGCACCGAATGCATCAAGGTTTTAACAAAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAAAACTTTGAAGGCGGACAAATTAACAGGAATGTTCTCACCTATGGAGACATTACCAGCAACATTCAAGTGTTATCCTTAAGTCTTTGTAAGGACAAC
AAGCATAATCAAAGAATAATAAAAGACGCAGACTACCGAAAAGAACTGGGAACGTTCTGCAAACAATATGGCGTAGAGCAAGAAATGTCACCATCAAAGAAGAAG
AAAAGATCTTCAAAGAAGCTGTTAACAAAAGGTCATTACGCTAGTCGATGTCCCCTAACAAGAAAGGTCAACAGTCTAGAAATAGACGAAGATCTGAAGCAATCT
CTTCTCTTTGCCATTTGCGACAAAGAAGAAGAAGAAACGTCATCCTCAGAAGGATCACTCGCTGAAGAAGGAATAGTCAATGAAATAGTAGAAGATTCCTCTTTC
GAAGCAGAATCTTCTGACTCTTCTCAATGTTTAGACGATGTTATCCCTAGCACCGAATGCATCAAGGTTTTAACAAAAGATTAG
Protein sequenceShow/hide protein sequence
MSENFEGGQINRNVLTYGDITSNIQVLSLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQEMSPSKKKKRSSKKLLTKGHYASRCPLTRKVNSLEIDEDLKQS
LLFAICDKEEEETSSSEGSLAEEGIVNEIVEDSSFEAESSDSSQCLDDVIPSTECIKVLTKD