; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 7-like
Genome locationchr08:2173537..2184317
RNA-Seq ExpressionLsi08G001040
SyntenyLsi08G001040
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039301.1 RNA-binding protein 7-like isoform X1 [Cucumis melo var. makuwa]2.4e-8784.58Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSG SN CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDK+SGK KGFAFAVYE+EEI NYAVKLFSGLV+LH+R LKFAVSGQDKSSP++SA+TSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SNVSHK RSH   GYSNEISQY N  ST CR  TYPENHV+AL   GLVNQYNGYGSH+DNYNKEYSQRY GTTLDSF QPKSRRHVTSYP+YYP YDLL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

Query:  K
        K
Subjt:  K

XP_022932504.1 RNA-binding protein 7 isoform X1 [Cucurbita moschata]5.6e-9285Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCT+Y+GNLDERVSDRVLYDILIQAGRVVDLHIPRDKESG+ +G+AFA YENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDK SPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SN+SHK RS IVPGYSNEIS Y N+LS SCRFS YPENHVEA P PGLVNQ NGYGS+ D++N +YSQRYSGT LDSFN PKSRRH TSYP+YYPPY+LL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

XP_022973396.1 RNA-binding protein 7-like isoform X1 [Cucurbita maxima]1.2e-9184.5Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCT+Y+GNLDERVSDRVLYDILIQAGRVVDLHIPRDKESG+ +G+AFA YENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDK SPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SN+SHK RS IVPGYSNEIS Y N+LS SCRFS YPENH+EA P PGLVNQ NGYGS+ D++N +YSQRYSGT LDSFN PKSRRH TSYP+YYPPY+LL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

XP_023523852.1 RNA-binding protein 7-like isoform X1 [Cucurbita pepo subsp. pepo]5.2e-9083.5Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCT+Y+GNLDERVSDRVLYDILIQAGRVVDLHIPRDKESG+ +G+AFA YENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDK SPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SN+SHK RS IVPGYSNEIS Y N+LS SCRFS Y ENH+EA P PGLVNQ NGYGS+ D++N +YSQRYSGT LDSFN PKSRRH TSYP++YPPY+LL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

XP_038890486.1 RNA-binding protein 7-like [Benincasa hispida]2.8e-9691.54Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCTVYVGNLDER+SDRVLYDILIQAGRVVDLHIPRDKESGK KGFAF VYE+EEITNYAVKLFSGLVTL+NRTLKFAVSGQDKSSPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SNVSHK RSHIV GYS EISQY + LSTSCRFSTYPE+HVEAL  PGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYP+YY  YDLL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A0A0KXV1 Uncharacterized protein3.2e-15463.56Show/hide
Query:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDKPSPGSYAITSS
        MSGRSNGCTIY+GNLDE+VSDRVLYDILIQAGRVVDLHIPRDKES KPKGFAFAEYESEEIANYAVKLFSGLVNLH RTLKFAVSGQDKPSPGS AITSS
Subjt:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDKPSPGSYAITSS

Query:  SNISNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP--------VPSIVVNL-R
        S              S+EISQ+SNRF+ SC+F TYPENHLE LL PGLVNQ+NGYGSHLDNYNKEYSQ R S        QP         P +V  L  
Subjt:  SNISNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP--------VPSIVVNL-R

Query:  NDLLDG---------------------------------CR-----------------------------------------------------------
        ND + G                                 CR                                                           
Subjt:  NDLLDG---------------------------------CR-----------------------------------------------------------

Query:  -RTLMSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSA
          T MSG SN CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDK++GK KGFAFAVYE+EEI NYAVKLFSGLV+LH+R LKFAVSGQDKSSP++SA
Subjt:  -RTLMSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSA

Query:  ITSSSNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPP
        ITSSSNVSHK RSH   GYSNEISQY N LSTSCR  TYPENHV+AL   GLVNQYNGYGSHLDNYNKEYSQRY  TTLDSF QPKSR +VT+YP+YY  
Subjt:  ITSSSNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPP

Query:  YDLLK
        YDLLK
Subjt:  YDLLK

A0A1S3CBQ3 RNA-binding protein 7-like isoform X14.9e-8683.58Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSG SN CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDK+SG  KGFAFAVYE+EEI NYAVKLFSGLV+LH+R LKFAVSGQDKSSP++SA+TSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SNVSHK RSH   GYSNEISQY N  STSCR  TYPENHV+AL   GLVNQYNGY SH+DNYNKEYSQRY GTTLDSF QPKSRR+VTSYP+YYP YDLL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

Query:  K
        K
Subjt:  K

A0A5A7TCE4 RNA-binding protein 7-like isoform X11.2e-8784.58Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSG SN CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDK+SGK KGFAFAVYE+EEI NYAVKLFSGLV+LH+R LKFAVSGQDKSSP++SA+TSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SNVSHK RSH   GYSNEISQY N  ST CR  TYPENHV+AL   GLVNQYNGYGSH+DNYNKEYSQRY GTTLDSF QPKSRRHVTSYP+YYP YDLL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

Query:  K
        K
Subjt:  K

A0A6J1EX61 RNA-binding protein 7 isoform X12.7e-9285Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCT+Y+GNLDERVSDRVLYDILIQAGRVVDLHIPRDKESG+ +G+AFA YENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDK SPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SN+SHK RS IVPGYSNEIS Y N+LS SCRFS YPENHVEA P PGLVNQ NGYGS+ D++N +YSQRYSGT LDSFN PKSRRH TSYP+YYPPY+LL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

A0A6J1I8J0 RNA-binding protein 7-like isoform X16.0e-9284.5Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSGRSNGCT+Y+GNLDERVSDRVLYDILIQAGRVVDLHIPRDKESG+ +G+AFA YENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDK SPSSSAITSS
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL
        SN+SHK RS IVPGYSNEIS Y N+LS SCRFS YPENH+EA P PGLVNQ NGYGS+ D++N +YSQRYSGT LDSFN PKSRRH TSYP+YYPPY+LL
Subjt:  SNVSHKLRSHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLL

SwissProt top hitse value%identityAlignment
O14102 Spliceosome-associated protein 492.2e-1138.37Show/hide
Query:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDK
        R+   TIY+GNLDE+V+D +L+++ +QAG VV++HIPRD+      GF F E+  E+   YA ++ +  V L  + ++   + QD+
Subjt:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDK

O14102 Spliceosome-associated protein 492.7e-0426.26Show/hide
Query:  NQYNGYG--SHLDNYNKEYSQSRLSSLRPFELMQPVPSIVVNLRNDLLDGCRRTLMSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKES
        N +NG+G    L   + EY+   L+ ++ F        I VN  +   D    TL+     G  ++VGNLD  V +RVLYD     G++V        E+
Subjt:  NQYNGYG--SHLDNYNKEYSQSRLSSLRPFELMQPVPSIVVNLRNDLLDGCRRTLMSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKES

Query:  GKSKGFAFAVYENEEITNYAVKLFSGLVTLHNR-TLKFAVSGQDK-------SSPSSSAITSSSNVSHKLRSHIVPGYS
        G+SKG+ F  Y++ E  + A++  +    ++   T+ +A   + K       +    +A    + V+   +S + PG+S
Subjt:  GKSKGFAFAVYENEEITNYAVKLFSGLVTLHNR-TLKFAVSGQDK-------SSPSSSAITSSSNVSHKLRSHIVPGYS

Q09442 Splicing factor 3B subunit 49.1e-1341.03Show/hide
Query:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK
        R+   TIYVG LDE+VS+ +L+++++QAG VV +++P+D+ +A  +GF F E+  EE A+YA+K+ + ++ L+ + +K
Subjt:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK

Q15427 Splicing factor 3B subunit 42.7e-1238.27Show/hide
Query:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK
        +S R+   T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ + + +G+ F E+ SEE A+YA+K+ + ++ L+ + ++
Subjt:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK

Q6AYL5 Splicing factor 3B subunit 42.7e-1238.27Show/hide
Query:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK
        +S R+   T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ + + +G+ F E+ SEE A+YA+K+ + ++ L+ + ++
Subjt:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK

Q8QZY9 Splicing factor 3B subunit 42.7e-1238.27Show/hide
Query:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK
        +S R+   T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ + + +G+ F E+ SEE A+YA+K+ + ++ L+ + ++
Subjt:  MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLK

Arabidopsis top hitse value%identityAlignment
AT1G49760.1 poly(A) binding protein 82.5e-1027.01Show/hide
Query:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI
        ++YVG+LD  V+D  L++   QAG+VV + + RD  + +  G+ +  Y + + A+ A+   +  + L+ R ++   S +D    K   G+  I +   +I
Subjt:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI

Query:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP---VPSIVVNLRNDLLDGCRR
         +K+  +  S++   +         SCK    P              Q  GYG  +     E +Q  +  L    L      V   V  L+ D       
Subjt:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP---VPSIVVNLRNDLLDGCRR

Query:  TLMSGRSNGCT-VYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG
           SG     T VYV NL E +SD  L  +  + G      I RD E GKSKGF F  +EN +    AV   +G
Subjt:  TLMSGRSNGCT-VYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG

AT1G49760.2 poly(A) binding protein 82.5e-1027.01Show/hide
Query:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI
        ++YVG+LD  V+D  L++   QAG+VV + + RD  + +  G+ +  Y + + A+ A+   +  + L+ R ++   S +D    K   G+  I +   +I
Subjt:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI

Query:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP---VPSIVVNLRNDLLDGCRR
         +K+  +  S++   +         SCK    P              Q  GYG  +     E +Q  +  L    L      V   V  L+ D       
Subjt:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQP---VPSIVVNLRNDLLDGCRR

Query:  TLMSGRSNGCT-VYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG
           SG     T VYV NL E +SD  L  +  + G      I RD E GKSKGF F  +EN +    AV   +G
Subjt:  TLMSGRSNGCT-VYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG

AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-1336.36Show/hide
Query:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDKPS
        R+   T+YVG LD ++S+ +L+++ +QAG VV++++P+D+ +   + + F EY SEE A+YA+K+ + ++ LH + ++   + QDK S
Subjt:  RSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDKPS

AT4G10110.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-4151.56Show/hide
Query:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS
        MSG SN CTVY+GN+DERVSDRVLYDI+IQAGRV+DLHIPRDKE+ K KGFAFA YE EEI +YAVKLFSGLV+L+NRTLKFA+SGQDK        ++S
Subjt:  MSGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSS

Query:  SNVSHKLR------SHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRH
        +N  H+ R       H      + + ++ +QL +    S  P ++ +  P PG+ N     G+ L     EYS+R  G+ LDS N  + RR+
Subjt:  SNVSHKLR------SHIVPGYSNEISQYPNQLSTSCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRH

AT4G34110.1 poly(A) binding protein 25.7e-1024.44Show/hide
Query:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI
        ++YVG+LD  V+D  L+D   Q G VV + + RD  + +  G+ +  + + + A  A++  +  + L+ + ++   S +D    +   G+  I +   +I
Subjt:  TIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQD----KPSPGSYAITS-SSNI

Query:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQPVPSIVVNLRNDLLDGCRRTLM
         +K+     SS+ N +         SCK                   Q  GYG  +   N+E +Q  +  L    L      +   LR        R   
Subjt:  SNKSRSQIVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQPVPSIVVNLRNDLLDGCRRTLM

Query:  SGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG
        + ++    VYV NL E  +D  L +   + G++    + +D E GKSKGF F  +EN +    AV+  +G
Subjt:  SGRSNGCTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAAGATCAAATGGATGCACCATTTACGTTGGTAATTTGGATGAAAGGGTAAGTGACAGGGTTCTCTATGACATTCTAATCCAAGCTGGGCGGGTAGTGGACTT
ACACATTCCTCGGGACAAGGAATCTGCCAAACCTAAGGGTTTTGCTTTTGCAGAATATGAAAGTGAAGAGATTGCCAACTATGCTGTTAAGCTTTTCTCTGGTCTCGTGA
ATCTTCATAATCGTACCTTGAAGTTTGCAGTATCTGGGCAAGACAAGCCTTCACCAGGTAGCTATGCAATCACTTCATCATCAAATATATCCAATAAATCGCGGTCACAG
ATTGTTTCGAGTTACTCTAATGAAATATCTCAGCATTCCAATCGCTTTACTACATCATGTAAATTTACAACATATCCTGAGAACCATCTAGAAGAGCTACTTTACCCTGG
TTTAGTTAACCAATATAATGGGTATGGATCACATTTGGATAACTACAATAAAGAATACAGTCAGAGTAGATTATCCTCCTTACGACCTTTTGAACTAATGCAGCCAGTGC
CTTCCATTGTGGTTAATCTTAGGAATGACCTCTTAGATGGATGTAGAAGAACACTCATGTCAGGAAGATCAAATGGCTGCACCGTTTACGTAGGTAATTTGGATGAAAGG
GTAAGTGATAGAGTTCTTTATGACATTTTAATCCAAGCTGGGCGGGTAGTGGACTTGCACATTCCTCGGGACAAGGAATCTGGCAAGTCCAAGGGTTTTGCTTTTGCAGT
ATATGAAAATGAGGAGATTACCAACTATGCTGTTAAGCTTTTCTCTGGTCTTGTGACTCTTCATAACCGTACCCTGAAGTTTGCAGTATCTGGGCAAGACAAGTCTTCAC
CTAGTAGTAGTGCAATCACTTCATCATCAAATGTATCTCATAAATTGAGGTCGCATATTGTTCCAGGTTACTCTAATGAAATATCTCAGTATCCCAATCAATTGTCAACA
TCGTGCAGGTTTTCAACGTACCCCGAAAACCATGTAGAAGCGCTTCCTTGCCCTGGTTTAGTTAACCAATATAATGGGTATGGATCACATTTGGATAACTACAATAAAGA
ATACAGTCAGAGATATTCTGGAACAACTTTGGATAGCTTTAACCAACCTAAATCACGCCGCCATGTTACGAGTTATCCAATATACTATCCTCCTTATGATCTTTTGAAAT
AA
mRNA sequenceShow/hide mRNA sequence
GGTTTATTGGCTTACTGTCTTTTCCGGTTCTCTCTCTTTTATCCTTACCTTTCCTTTTTGCTTTCTTCAACTTCGGTCTAGGCTTTTGCATCTGAACTTGCAGAAACAAT
CATGTCAGGAAGATCAAATGGATGCACCATTTACGTTGGTAATTTGGATGAAAGGGTAAGTGACAGGGTTCTCTATGACATTCTAATCCAAGCTGGGCGGGTAGTGGACT
TACACATTCCTCGGGACAAGGAATCTGCCAAACCTAAGGGTTTTGCTTTTGCAGAATATGAAAGTGAAGAGATTGCCAACTATGCTGTTAAGCTTTTCTCTGGTCTCGTG
AATCTTCATAATCGTACCTTGAAGTTTGCAGTATCTGGGCAAGACAAGCCTTCACCAGGTAGCTATGCAATCACTTCATCATCAAATATATCCAATAAATCGCGGTCACA
GATTGTTTCGAGTTACTCTAATGAAATATCTCAGCATTCCAATCGCTTTACTACATCATGTAAATTTACAACATATCCTGAGAACCATCTAGAAGAGCTACTTTACCCTG
GTTTAGTTAACCAATATAATGGGTATGGATCACATTTGGATAACTACAATAAAGAATACAGTCAGAGTAGATTATCCTCCTTACGACCTTTTGAACTAATGCAGCCAGTG
CCTTCCATTGTGGTTAATCTTAGGAATGACCTCTTAGATGGATGTAGAAGAACACTCATGTCAGGAAGATCAAATGGCTGCACCGTTTACGTAGGTAATTTGGATGAAAG
GGTAAGTGATAGAGTTCTTTATGACATTTTAATCCAAGCTGGGCGGGTAGTGGACTTGCACATTCCTCGGGACAAGGAATCTGGCAAGTCCAAGGGTTTTGCTTTTGCAG
TATATGAAAATGAGGAGATTACCAACTATGCTGTTAAGCTTTTCTCTGGTCTTGTGACTCTTCATAACCGTACCCTGAAGTTTGCAGTATCTGGGCAAGACAAGTCTTCA
CCTAGTAGTAGTGCAATCACTTCATCATCAAATGTATCTCATAAATTGAGGTCGCATATTGTTCCAGGTTACTCTAATGAAATATCTCAGTATCCCAATCAATTGTCAAC
ATCGTGCAGGTTTTCAACGTACCCCGAAAACCATGTAGAAGCGCTTCCTTGCCCTGGTTTAGTTAACCAATATAATGGGTATGGATCACATTTGGATAACTACAATAAAG
AATACAGTCAGAGATATTCTGGAACAACTTTGGATAGCTTTAACCAACCTAAATCACGCCGCCATGTTACGAGTTATCCAATATACTATCCTCCTTATGATCTTTTGAAA
TAAGGCAGCTAGTGCCTTCCGTTTTGGTTAATCTTAATGGTAATTTAAATTTTAGGAAAAGTTGTATCGCTTAGTTGGATGCAAATGGGTGCATTAGTGGTAAATGGTAT
GATATTTGCTATGGAGCATGCTAGTGTATGTTACTGAATACAGTCATTTTGTAGGTGTACATGTTCATATGATTTCGGATGTGTCATTATAGTCGATACACCATTTAAAG
TATTGTAACCTATTTTATTAAATTTGCAGATTTTCTTTAATTCCTGTTTAATGTTACGGATTATAAATGGTAGTTTTTATGGTGATCGAAAGGTGTTGTAACCCTTTTGG
TTATTGTATATTGAGTATTTAGTTATTTCCCAAGTGTTGTACTTGAGCTAATGTATAAATATTATTAATGTCTGCAATTATTGGTGGTTTCTTTATTATATTTTCCCCCC
CTTTCCGATTTATGTCATCTTTATTAGAGAAATACAGGACAATTTTTTTTTATTAGACTCTGGTTCACGTGTCAGTGAAGTTAAAGCTAATTAACCCAGACATTTTGGTT
TGAGTTTATTGTCATTTCTGCCTTTGGGAATGCCTGAACTGAAATACTTGGTCGGTTAAATTTTAAGATACCATGGTCTAGCTTTGGCCTGCCCCCTTACTTTAATGAAG
AAGAGAATGTGGAAAATGTCAATTTTTCTTGGAAGAAAAAAATGAACACTAAGCTGACATGACTGCTTTTATTGCATTTTGTTGTAGACCTAGTTGTCAGTTGCAGCACT
TTTGTTTGAATATATATTTTTTAAAATTTACATTTATTTATAAATAATATGTTTGCTTAGTTTTTCAGTTTTTGAGGCCATGTTTGAAAAGATTACCAAAGTTTAAAAGT
CAAATGAAATTTGAAAACTATTTAGAATTGCACCAACTATTTAAAAAGATTTCTATAAGTAGATTACAAAGAAAGTTCATAGTTTCTCTTCAAATAATCTTGAGAACAGA
AGAAAATCGTTATCAAGGATTATGTTTTCTTTGTCTTGTTCTTGTGCTTTTATTGTTTTGAGACTTCTAATTCTTATTCTTATATTTTATAGTGGCTTAATCTGAAATAA
ATGTATTACACGGCATGCTTGAAATTTTCAAGACATAATTTCTTTTCGAAAAGAGTTAATGATTGAAAGTTTACTTCTTCGAGAAGACGGTTTTTACTAGTCCTGAGAGC
CGTTCATTTTTTTCGTGGGTAGATAAACCATTTGGTGATCAGGCTAGTGGCAGTTCTATCAGAGGATCATTATAGTGGTTTCTATCAAAATTCAAGAATCTAAATCCCTC
CTTTATCTTATTTGGGCTCAAAGTTCCTATCTGAAGTTGCCCATTACTTTTACTATTCTTTGTATCATAATATGAATTTGTTTATTTCCTTTTATTTCTACCCTTTTTAT
TGGTCGTGAAATCTGTATTTGATGTAAAATATATAAATTTGTTTGTATGTGTATAATAAATGATTTTTTTTTGGC
Protein sequenceShow/hide protein sequence
MSGRSNGCTIYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESAKPKGFAFAEYESEEIANYAVKLFSGLVNLHNRTLKFAVSGQDKPSPGSYAITSSSNISNKSRSQ
IVSSYSNEISQHSNRFTTSCKFTTYPENHLEELLYPGLVNQYNGYGSHLDNYNKEYSQSRLSSLRPFELMQPVPSIVVNLRNDLLDGCRRTLMSGRSNGCTVYVGNLDER
VSDRVLYDILIQAGRVVDLHIPRDKESGKSKGFAFAVYENEEITNYAVKLFSGLVTLHNRTLKFAVSGQDKSSPSSSAITSSSNVSHKLRSHIVPGYSNEISQYPNQLST
SCRFSTYPENHVEALPCPGLVNQYNGYGSHLDNYNKEYSQRYSGTTLDSFNQPKSRRHVTSYPIYYPPYDLLK