; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTMV resistance protein N-like
Genome locationchr08:2299449..2304998
RNA-Seq ExpressionLsi08G001120
SyntenyLsi08G001120
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR011713 - Leucine-rich repeat 3
IPR032675 - Leucine-rich repeat domain superfamily
IPR044974 - Disease resistance protein, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141876.1 TMV resistance protein N-like isoform X1 [Momordica charantia]2.2e-4376.92Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LI LH CHSNLKQ W  EKHL KLKYIKLNHS++L KTPDF +IP L+RLELEGCTSLVNIHPSIF A++LIFLSL+DC NLT LPSHI I+VLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KL K+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

XP_022141877.1 TMV resistance protein N-like isoform X2 [Momordica charantia]2.2e-4376.92Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LI LH CHSNLKQ W  EKHL KLKYIKLNHS++L KTPDF +IP L+RLELEGCTSLVNIHPSIF A++LIFLSL+DC NLT LPSHI I+VLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KL K+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

XP_023535310.1 TMV resistance protein N-like [Cucurbita pepo subsp. pepo]2.4e-4274.36Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        E +LIKLHMCHSNLKQ W GEKHL KLKYIKLNHS++L KTP+F  IP+L RLELEGCT+LVNIHP+IF AK L FLS KDCINLT  P+ I IE L+VL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KLKK+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

XP_023535316.1 TMV resistance protein N-like [Cucurbita pepo subsp. pepo]6.4e-4374.36Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LIKLHMCHSNLKQ W GEKH  KLKYIKLNHS++L KTP+F  IP L RLELEGCT+LVNIHPSIF AK L FLSLKDCINLT  P+ I ++ LE+L
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KLKK+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

XP_038889142.1 disease resistance protein RPV1-like [Benincasa hispida]6.6e-5693.16Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EYELI+LH+CHSN KQ WQG+KHLGKLKYIKLNHSKRLL+TPDFTQ+PYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGCLKLKKLPEFTGN
Subjt:  NLSGCLKLKKLPEFTGN

TrEMBL top hitse value%identityAlignment
A0A0A0KUR8 Uncharacterized protein7.7e-4275.21Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        E +LI+LHMCHSNLKQ WQ EK+L +LKYIKLN S++L KTP+F  IP L+RLELE CTSLVNIHPSIF A++LIFLSLKDCINLT LPSHI I+VLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC K+KK+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

A0A6J1CKI7 TMV resistance protein N-like isoform X11.1e-4376.92Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LI LH CHSNLKQ W  EKHL KLKYIKLNHS++L KTPDF +IP L+RLELEGCTSLVNIHPSIF A++LIFLSL+DC NLT LPSHI I+VLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KL K+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

A0A6J1CL32 TMV resistance protein N-like isoform X21.1e-4376.92Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LI LH CHSNLKQ W  EKHL KLKYIKLNHS++L KTPDF +IP L+RLELEGCTSLVNIHPSIF A++LIFLSL+DC NLT LPSHI I+VLEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC KL K+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

A0A6J1EBI7 TMV resistance protein N-like7.7e-4273.5Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        E +LIKLHMCHSNLKQ W GEKHL +LKYIKLNHS +L KTP+F  IP L RLELEGCTSLVNIHP+IF AK+L FLSLKDCINLT  P  I I+ LE+L
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         L+GC KLKK+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

A0A6J1I7M5 TMV resistance protein N-like4.5e-4274.36Show/hide
Query:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL
        EY+LIKLHMCHS+LKQ W GEKHL KLKYIKLNHS++L KTP+F  IP L RLEL GCTSLVNIHP+IF A++L FLSLKDCINLT LP  I I+ LEVL
Subjt:  EYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVL

Query:  NLSGCLKLKKLPEFTGN
         LSGC K+KK+PEF+GN
Subjt:  NLSGCLKLKKLPEFTGN

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq15.1e-1943.48Show/hide
Query:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNL
        +L+ L M  S++ +LW G K L  L  + L++  +L++TPDF  I  LERL L  C +LV +HPS+   K LI L++  CI+L +LP+ I  E LEVL+L
Subjt:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNL

Query:  SGCLKLKKLPEFTGN
        + C  LK  PE   N
Subjt:  SGCLKLKKLPEFTGN

F4JT78 Disease resistance protein RPP2A4.2e-2141.18Show/hide
Query:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS
        L++L+M +SN+++LW+G+K+L KLK IKL+HS+ L      ++   LE ++LEGCTSL+++  SI    +L+ L++KDC  L  LPS + +  L++LNLS
Subjt:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS

Query:  GCLKLKKLPEFTGNKVDYY
        GC + + + +F  N  + Y
Subjt:  GCLKLKKLPEFTGNKVDYY

Q9SZ67 Probable WRKY transcription factor 196.1e-2041.73Show/hide
Query:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE
        L++L++  S  K+LW+G+K         L KLK ++L++S +L K P  +    LE ++LEGC SL+++  SI   K+L+FL+LK C  L  +PS + +E
Subjt:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE

Query:  VLEVLNLSGCLKLKKLPEFTGNKVDYY
         LEVLNLSGC KL   PE + N  + Y
Subjt:  VLEVLNLSGCLKLKKLPEFTGNKVDYY

V9M2S5 Disease resistance protein RPV11.0e-2249.14Show/hide
Query:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHI-TIEVLEVLN
        +L++LH+  SN+KQLWQG K L +LK I L++S++L +  +F+ +P LERL L GC SL++IHPS+   K+L  LSL+ C  L  LP  I  +E LE L 
Subjt:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHI-TIEVLEVLN

Query:  LSGCLKLKKLPEFTGN
        LS C K +K PE  GN
Subjt:  LSGCLKLKKLPEFTGN

V9M398 Disease resistance protein RUN11.2e-2047.41Show/hide
Query:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHI-TIEVLEVLN
        +L++LH+  SN+KQL  G K L  LK I L++S++L +  +F+ +P LERL L GC SL++IHPS+   K+L  LSLK C  L  LP  I  +E LE+L+
Subjt:  ELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHI-TIEVLEVLN

Query:  LSGCLKLKKLPEFTGN
        L+ C K +K PE  GN
Subjt:  LSGCLKLKKLPEFTGN

Arabidopsis top hitse value%identityAlignment
AT4G12020.1 protein kinase family protein4.3e-2141.73Show/hide
Query:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE
        L++L++  S  K+LW+G+K         L KLK ++L++S +L K P  +    LE ++LEGC SL+++  SI   K+L+FL+LK C  L  +PS + +E
Subjt:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE

Query:  VLEVLNLSGCLKLKKLPEFTGNKVDYY
         LEVLNLSGC KL   PE + N  + Y
Subjt:  VLEVLNLSGCLKLKKLPEFTGNKVDYY

AT4G12020.2 protein kinase family protein4.3e-2141.73Show/hide
Query:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE
        L++L++  S  K+LW+G+K         L KLK ++L++S +L K P  +    LE ++LEGC SL+++  SI   K+L+FL+LK C  L  +PS + +E
Subjt:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE

Query:  VLEVLNLSGCLKLKKLPEFTGNKVDYY
         LEVLNLSGC KL   PE + N  + Y
Subjt:  VLEVLNLSGCLKLKKLPEFTGNKVDYY

AT4G12020.3 protein kinase family protein4.3e-2141.73Show/hide
Query:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE
        L++L++  S  K+LW+G+K         L KLK ++L++S +L K P  +    LE ++LEGC SL+++  SI   K+L+FL+LK C  L  +PS + +E
Subjt:  LIKLHMCHSNLKQLWQGEK--------HLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIE

Query:  VLEVLNLSGCLKLKKLPEFTGNKVDYY
         LEVLNLSGC KL   PE + N  + Y
Subjt:  VLEVLNLSGCLKLKKLPEFTGNKVDYY

AT4G19500.1 nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding3.0e-2241.18Show/hide
Query:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS
        L++L+M +SN+++LW+G+K+L KLK IKL+HS+ L      ++   LE ++LEGCTSL+++  SI    +L+ L++KDC  L  LPS + +  L++LNLS
Subjt:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS

Query:  GCLKLKKLPEFTGNKVDYY
        GC + + + +F  N  + Y
Subjt:  GCLKLKKLPEFTGNKVDYY

AT4G19500.2 nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding3.0e-2241.18Show/hide
Query:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS
        L++L+M +SN+++LW+G+K+L KLK IKL+HS+ L      ++   LE ++LEGCTSL+++  SI    +L+ L++KDC  L  LPS + +  L++LNLS
Subjt:  LIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLS

Query:  GCLKLKKLPEFTGNKVDYY
        GC + + + +F  N  + Y
Subjt:  GCLKLKKLPEFTGNKVDYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGAGCTTATTAAACTTCACATGTGTCATAGCAACTTGAAACAACTTTGGCAAGGAGAAAAGCATTTGGGGAAGTTGAAGTATATCAAACTGAATCAT
TCGAAGAGGCTGTTGAAAACTCCAGACTTCACACAAATTCCATATCTTGAAAGATTAGAGCTGGAAGGTTGCACAAGTTTAGTCAACATTCATCCATCCATTTTT
GTAGCAAAAAGACTCATTTTTCTAAGCTTGAAAGATTGCATCAATCTCACCAAACTTCCATCCCATATTACCATTGAGGTTCTTGAAGTCCTAAATCTCTCAGGT
TGTTTGAAGCTAAAAAAACTCCCAGAATTTACAGGCAACAAAGTAGATTATTACAACTCCATTTGGACAACACCTCCATATCATGCCTACACCTTCATCTATTAC
AACCTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGAGCTTATTAAACTTCACATGTGTCATAGCAACTTGAAACAACTTTGGCAAGGAGAAAAGCATTTGGGGAAGTTGAAGTATATCAAACTGAATCAT
TCGAAGAGGCTGTTGAAAACTCCAGACTTCACACAAATTCCATATCTTGAAAGATTAGAGCTGGAAGGTTGCACAAGTTTAGTCAACATTCATCCATCCATTTTT
GTAGCAAAAAGACTCATTTTTCTAAGCTTGAAAGATTGCATCAATCTCACCAAACTTCCATCCCATATTACCATTGAGGTTCTTGAAGTCCTAAATCTCTCAGGT
TGTTTGAAGCTAAAAAAACTCCCAGAATTTACAGGCAACAAAGTAGATTATTACAACTCCATTTGGACAACACCTCCATATCATGCCTACACCTTCATCTATTAC
AACCTTGACTAG
Protein sequenceShow/hide protein sequence
MEYELIKLHMCHSNLKQLWQGEKHLGKLKYIKLNHSKRLLKTPDFTQIPYLERLELEGCTSLVNIHPSIFVAKRLIFLSLKDCINLTKLPSHITIEVLEVLNLSG
CLKLKKLPEFTGNKVDYYNSIWTTPPYHAYTFIYYNLD