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Lsi08G001130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr08:2342931..2349379
RNA-Seq ExpressionLsi08G001130
SyntenyLsi08G001130
Gene Ontology termsGO:0051321 - meiotic cell cycle (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1747Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
XP_022137018.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]4.1e-1847Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ++ER+WK +V+EL   E+ +FI++P+R++H+AAK  N E LII++ +   + ++L + D+D + IFH+AVENR+E+VF+L+ +I  +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
XP_022954800.1 ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]1.2e-1747Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
XP_022994346.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita maxima]5.9e-1746Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQ LAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]1.2e-1747Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
TrEMBL top hitse value%identityAlignment
A0A6J1C6Z9 uncharacterized protein LOC111008827 isoform X11.9e-1645Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLA + IER+W+ +V+ L  SE+ + IE+P+R++H+AA+  N+E LII++ +   + ++L + DD+ + IFH+AVENR+E+VF+L+  IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
A0A6J1C813 uncharacterized protein LOC111008827 isoform X21.9e-1645Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLA + IER+W+ +V+ L  SE+ + IE+P+R++H+AA+  N+E LII++ +   + ++L + DD+ + IFH+AVENR+E+VF+L+  IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
A0A6J1C944 ankyrin repeat-containing protein ITN1-like2.0e-1847Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ++ER+WK +V+EL   E+ +FI++P+R++H+AAK  N E LII++ +   + ++L + D+D + IFH+AVENR+E+VF+L+ +I  +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like5.8e-1847Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQTLAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like2.9e-1746Show/hide
Query:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        +N  LMQ LAHQ +ER+W  +V+EL   E+  FI++P+R++H+AA+  N E LII++ +   + ++L + DDD + IFH+AVENR+E+VF+L+ +IG +K
Subjt:  FNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G35810.1 Ankyrin repeat family protein1.4e-1131.58Show/hide
Query:  MQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK
        M+TLAH ++E +W  ++ +LP+ E+ +F+ S   ++ +AA+S N+E+L+I++ +   + +++   D   + +FH+A  NR E +FN + ++G +K
Subjt:  MQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCAACAACACTCTAATGCAGACATTGGCACATCAGTTAATTGAACGTATATGGAAGAAGATTGTTGAAGAACTTCCAATTTCTGAGATGTTGGAGTTCATTGA
ATCCCCAACAAGAGTCATGCATGAAGCAGCTAAATCAGACAATATTGAAGTTTTAATTATTATACTCAGCAACTCATTTGAATTTTCTGAGGTGTTGTTGCGAACTGATG
ATGACAAGAGAATCATCTTCCATTTGGCAGTAGAAAATAGAAAAGAAACTGTATTCAATTTATTATCTGATATTGGTCCAATGAAGGGTGACATAGGATGCTTGATGTAT
CCGCTTTGCTTTGGTTTTAGGAGGAAAAAAATTCCCAACAAGAGCAGTTTTATGGCAAGCGACTTTTCAAACTCCCTAGACATCATTCGAATTAAAGCCGTTATGATTGA
TGAAGATTTTTCAACGGAGATGCTTGAGAAAGGATCAGAAATTGGAAAAGAAGATGAAGAGTTGCATTTAGATACAAATGAGATTCTCCTAAACGAAATTACATTGGGAA
TCGGAATGGGTGGCCTGGTATTAAAAAATACAGCAAGCTCCTTGGATAATGAAAAGGCCAAACTAATTCCTGCTGAAGCATTTAATCCTCCTATTTCTCATCTCTCTTCA
GTTTTAATGAGGAATGAAGCACATACCTCATTGGATAAAGGAAAAGGGCCGATTCATACACCCTCTTCTTTTATTAATGAGTGCAATTTTCAAGAAGGAATTTCAAGGGT
CACTTTAGTTCAGCAACCATTTGAAGCAGACTCAGAAATTGAACAGCCACTCTCCCACGCATGCCCGACTCAAACTCCATCCCCAAACTCTCAATTACCAAACACCGAGC
TGGAAGTGGAAGAGGCCAATCAAGATTTTCAGGAAAATTTTAATGAGTTATTAAATATACAAAATAATATTGACTCAACCACAAATTTTGGACATCAGACAAGAAAATCC
TCAGTTGAGTCATTGTTAAACCACTCTACAAGCCCAGATTTTTTGGAAGAAATTTGTGTTCAATCTCTGGTTCCTCAAAGTACAAGTCCTGTAAAGAAAAGACACTCTTC
AGAGGTAATAGTTAATACAAAGTTCAGCATCCCAGGTTCAAATGTATCATTTGTCCAAGGAACATTTTTCCAAGAATACAAGAAGCAACTTGCCCACGATTTAGATAATG
AGACAATT
mRNA sequenceShow/hide mRNA sequence
GTTTTAAAATGTTCTTCAACAACACTCTAATGCAGACATTGGCACATCAGTTAATTGAACGTATATGGAAGAAGATTGTTGAAGAACTTCCAATTTCTGAGATGTTGGAG
TTCATTGAATCCCCAACAAGAGTCATGCATGAAGCAGCTAAATCAGACAATATTGAAGTTTTAATTATTATACTCAGCAACTCATTTGAATTTTCTGAGGTGTTGTTGCG
AACTGATGATGACAAGAGAATCATCTTCCATTTGGCAGTAGAAAATAGAAAAGAAACTGTATTCAATTTATTATCTGATATTGGTCCAATGAAGGGTGACATAGGATGCT
TGATGTATCCGCTTTGCTTTGGTTTTAGGAGGAAAAAAATTCCCAACAAGAGCAGTTTTATGGCAAGCGACTTTTCAAACTCCCTAGACATCATTCGAATTAAAGCCGTT
ATGATTGATGAAGATTTTTCAACGGAGATGCTTGAGAAAGGATCAGAAATTGGAAAAGAAGATGAAGAGTTGCATTTAGATACAAATGAGATTCTCCTAAACGAAATTAC
ATTGGGAATCGGAATGGGTGGCCTGGTATTAAAAAATACAGCAAGCTCCTTGGATAATGAAAAGGCCAAACTAATTCCTGCTGAAGCATTTAATCCTCCTATTTCTCATC
TCTCTTCAGTTTTAATGAGGAATGAAGCACATACCTCATTGGATAAAGGAAAAGGGCCGATTCATACACCCTCTTCTTTTATTAATGAGTGCAATTTTCAAGAAGGAATT
TCAAGGGTCACTTTAGTTCAGCAACCATTTGAAGCAGACTCAGAAATTGAACAGCCACTCTCCCACGCATGCCCGACTCAAACTCCATCCCCAAACTCTCAATTACCAAA
CACCGAGCTGGAAGTGGAAGAGGCCAATCAAGATTTTCAGGAAAATTTTAATGAGTTATTAAATATACAAAATAATATTGACTCAACCACAAATTTTGGACATCAGACAA
GAAAATCCTCAGTTGAGTCATTGTTAAACCACTCTACAAGCCCAGATTTTTTGGAAGAAATTTGTGTTCAATCTCTGGTTCCTCAAAGTACAAGTCCTGTAAAGAAAAGA
CACTCTTCAGAGGTAATAGTTAATACAAAGTTCAGCATCCCAGGTTCAAATGTATCATTTGTCCAAGGAACATTTTTCCAAGAATACAAGAAGCAACTTGCCCACGATTT
AGATAATGAGACAATT
Protein sequenceShow/hide protein sequence
MFFNNTLMQTLAHQLIERIWKKIVEELPISEMLEFIESPTRVMHEAAKSDNIEVLIIILSNSFEFSEVLLRTDDDKRIIFHLAVENRKETVFNLLSDIGPMKGDIGCLMY
PLCFGFRRKKIPNKSSFMASDFSNSLDIIRIKAVMIDEDFSTEMLEKGSEIGKEDEELHLDTNEILLNEITLGIGMGGLVLKNTASSLDNEKAKLIPAEAFNPPISHLSS
VLMRNEAHTSLDKGKGPIHTPSSFINECNFQEGISRVTLVQQPFEADSEIEQPLSHACPTQTPSPNSQLPNTELEVEEANQDFQENFNELLNIQNNIDSTTNFGHQTRKS
SVESLLNHSTSPDFLEEICVQSLVPQSTSPVKKRHSSEVIVNTKFSIPGSNVSFVQGTFFQEYKKQLAHDLDNETI