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Lsi08G001140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat family protein
Genome locationchr08:2392109..2398684
RNA-Seq ExpressionLsi08G001140
SyntenyLsi08G001140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0640.22Show/hide
Query:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        IL  A  K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLVQ+TS     A N K +  L  AA
Subjt:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

XP_022137347.1 uncharacterized protein LOC111008827 isoform X1 [Momordica charantia]5.0e-0741.76Show/hide
Query:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        LV  N K      +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

XP_022137352.1 uncharacterized protein LOC111008827 isoform X2 [Momordica charantia]5.0e-0741.76Show/hide
Query:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        LV  N K      +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

XP_022159355.1 uncharacterized protein LOC111025772, partial [Momordica charantia]3.2e-0646.75Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        ++L KAA  GDWKTA SI   D S L+  L   GD  LHI A  KH SF+ NLVQ+ SS      N + +  LT A+
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]3.2e-0640.22Show/hide
Query:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        IL  A  K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLV++TSS    A N K +  L  AA
Subjt:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

TrEMBL top hitse value%identityAlignment
A0A6J1C6Z9 uncharacterized protein LOC111008827 isoform X12.4e-0741.76Show/hide
Query:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        LV  N K      +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

A0A6J1C813 uncharacterized protein LOC111008827 isoform X22.4e-0741.76Show/hide
Query:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        LV  N K      +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  LVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

A0A6J1DYH0 uncharacterized protein LOC1110257721.6e-0646.75Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        ++L KAA  GDWKTA SI   D S L+  L   GD  LHI A  KH SF+ NLVQ+ SS      N + +  LT A+
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like2.7e-0640.22Show/hide
Query:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        IL  A  K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLVQ+TS     A N K +  L  AA
Subjt:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like6.0e-0639.13Show/hide
Query:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        IL  A  K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLV++TS     A N K +  L  AA
Subjt:  ILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54070.1 Ankyrin repeat family protein2.9e-0532.88Show/hide
Query:  KAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        KA   GDWKTA ++I+     +   +T   +I LHI    KH  F++NL++       +  N+  + PL+ AA
Subjt:  KAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA

AT5G35830.1 Ankyrin repeat family protein2.5e-0437.04Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLV
        ++L +AA +GDWK A  II     ++   +T   + VLHI    KH  F++NL+
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTCGCCCAGCAACCCACGCCGCCGCCAATCCCCGTCGCCCTTCATCCCTCGGTCGTTCGTCGACGCTTCACGTCTCTGAGCGTCGTTGTTGTTGGAATTTTAGT
TTTTGCAAATGTTAAGCTTGCACACTATGAACAACATATTAAGTTACGCAAAGCTGCATATGAGGGTGATTGGAAGACTGCTTGTTCGATCATTAATTCAGACATATCGA
TGCTTAGCAGTGTCCTTACACAAGTTGGGGATATAGTTCTACATATTGTTGCTTGCACGAAGCATCATTCCTTTCTGAAAAATCTAGTTCAAATTACGTCCTCGGAGCAC
TTCAATGCCATGAATAGAAAAGTAGATATCCCTTTAACGAATGCTGCATGA
mRNA sequenceShow/hide mRNA sequence
TTTGTGCAAAAAGAAAAAGAAAAACTATTTTCTCTCCTTTTGCCAGTGCGCACGCTCCCCCCCGGTCGTCTTCTTCTTTCCGTTAACTCCAGTTCCGCCGCCGCATTTCC
GATCAGACACTCGCCCGCCCGTCCGCCTATTATCTCTGATCGTCTTCGTCCGCGTAAGGTTCTGCCGGCCACCGGTGAGTCCCTTCTACTCTCTTTCTCTAACCCACGTA
CAGTAGTGTTCAATCGCACCAATATGTCCGTCGCCCAGCAACCCACGCCGCCGCCAATCCCCGTCGCCCTTCATCCCTCGGTCGTTCGTCGACGCTTCACGTCTCTGAGC
GTCGTTGTTGTTGGAATTTTAGTTTTTGCAAATGTTAAGCTTGCACACTATGAACAACATATTAAGTTACGCAAAGCTGCATATGAGGGTGATTGGAAGACTGCTTGTTC
GATCATTAATTCAGACATATCGATGCTTAGCAGTGTCCTTACACAAGTTGGGGATATAGTTCTACATATTGTTGCTTGCACGAAGCATCATTCCTTTCTGAAAAATCTAG
TTCAAATTACGTCCTCGGAGCACTTCAATGCCATGAATAGAAAAGTAGATATCCCTTTAACGAATGCTGCATGATTTGGGGTAGTGAAGATCGCAAAAATTATACTGACA
AGAATTCAACAATTCTATACAATGAAAACCATAAGGGTGAAACCCCAATTATTGCTGCCATGGGCCTCAAGCACAAGACAATGGTATATTTCCTGTTCGATGCAATCAAA
TTTGAAGACTTGGATGATGCCAAGTTGTTCAAGCTCTAACTATTATGATATAGCATTGGCTGTTATGGATAAAAAACCAGACTTGGCATTGAGAAGGGCCCCAAAATAAA
AAAATGGCATCACATCATCAGAAAATGGCATTACAGCGTTGCATGTGCTGGCCAAAAAATCGCCTGCAACAATTGGTACTCTGCTTTTTAAAATGATTTATAAATTCACG
TAATGCCCCAAACCTTTTCCTATATATTGTAGATTTATTCTTTATGTGAAATAGTTTTTCCAAGATAGATCGATTAGAGAATATCTAGAGTACCACAAAACCATTTGATT
TAAATTCTTCATTTCCATATAAGTTTAGGTATCCAAGATAGTGTCTAGAGTATCAAATCATTCTTAATTTCTCTAATATATACAAGCTCTACTTCATGGTCTGTTAACAT
TTTCAATTGTAAAATATTTAAACATACTTTTTTCTTGCAACGTACTCGAACATAATTTTTTTCAAAAAAAAGTATCAAAATAACAGCAATTAGGAAGAAGAGAGAAATTA
CGAAAAAACCATTTAATTTCGTACTTTATGCCCCCAATAAAAAAATGGCATCACATAATTTTTTTGGAAAAAATTACGTTGCAAGAAAAAAGTATGTTTAAATATTTTAC
AATTGAAAATGTTAATAGGCCATTAGGTGGAGCTTGTATATATTAGAGAAATTAAGAACGGTTTGATACTCTAGACACTATCTTGGATACCTAAACTTGTATGGAAATGA
AGAATTTAAATCAAATGGTTTGGTGGTACTCTAGATATTCTCTAATCGATCTATCTTGCTCTTTAATGATTTTGCTTAAATGTATCTTATTATTTCAACCCGCTTGACTT
TACAACATTTGATTGTCAAGGAAACTCGTAGGAAATTAATTCCTAAATAGGTTGACCATCATTGATTGAACTTATGACCTCTTAG
Protein sequenceShow/hide protein sequence
MSVAQQPTPPPIPVALHPSVVRRRFTSLSVVVVGILVFANVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEH
FNAMNRKVDIPLTNAA