; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionResistance gene-like protein
Genome locationchr08:2810670..2811176
RNA-Seq ExpressionLsi08G001300
SyntenyLsi08G001300
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAU04758.1 MRGH10 [Cucumis melo]2.3e-2361.61Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK
        A S SHP + ++D FLSF RD E        K LYE LS WG+K+FMDD      DD V  SD IVKAIE S TSIVVLSK Y +S WCLRELVKI+  K
Subjt:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK

Query:  DKTTHQVLPLFY
        DKT HQVLPLFY
Subjt:  DKTTHQVLPLFY

KAE8648983.1 hypothetical protein Csa_009214 [Cucumis sativus]1.3e-2359.81Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        MA S SHP + ++D FLSF RD E        K LYE LS WG+K+FMD+ ++  +SD IVKAIE S TS+VVLS+ Y SS WCLRELVKI++ K KT H
Subjt:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFY
        QVLPLFY
Subjt:  QVLPLFY

XP_016902418.1 PREDICTED: TMV resistance protein N-like [Cucumis melo]2.3e-2361.61Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK
        A S SHP + ++D FLSF RD E        K LYE LS WG+K+FMDD      DD V  SD IVKAIE S TSIVVLSK Y +S WCLRELVKI+  K
Subjt:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK

Query:  DKTTHQVLPLFY
        DKT HQVLPLFY
Subjt:  DKTTHQVLPLFY

XP_031741454.1 TMV resistance protein N [Cucumis sativus]4.6e-2438.69Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        MA S SHP + ++D FLSF RD E        K LYE LS WG+K+FMD+ ++  +SD IVKAIE S TS+VVLS+ Y SS WCLRELVKI++ K KT H
Subjt:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFY--RLVP----------------------------GDIGK-GDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSVP
        QVLPLFY  R+ P                             ++G    ++ K+ Y+ +  +FI    N + +   ++E+  W  ++ ++  L  V +P
Subjt:  QVLPLFY--RLVP----------------------------GDIGK-GDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSVP

XP_038890436.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]6.0e-2450Show/hide
Query:  MAASLSHPWERS-YDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNID----DTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK
        MA S S+P  +  +DVF+SF RD E        K LYE L GWGMKVFMDD+ D    D VSDKIVKAIE S+T IVVLSK Y SS  CLRELVKI    
Subjt:  MAASLSHPWERS-YDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNID----DTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK

Query:  DKTTHQVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKV
         KTT+QVLPLF      ++  G    KY + +++  FI +    KN     +E+ GWRDA+ ++ SLS V
Subjt:  DKTTHQVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKV

TrEMBL top hitse value%identityAlignment
A0A0A0KUR0 TIR domain-containing protein2.2e-2438.69Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        MA S SHP + ++D FLSF RD E        K LYE LS WG+K+FMD+ ++  +SD IVKAIE S TS+VVLS+ Y SS WCLRELVKI++ K KT H
Subjt:  MAASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFY--RLVP----------------------------GDIGK-GDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSVP
        QVLPLFY  R+ P                             ++G    ++ K+ Y+ +  +FI    N + +   ++E+  W  ++ ++  L  V +P
Subjt:  QVLPLFY--RLVP----------------------------GDIGK-GDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSVP

A0A1S4E2G9 TMV resistance protein N-like1.1e-2361.61Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK
        A S SHP + ++D FLSF RD E        K LYE LS WG+K+FMDD      DD V  SD IVKAIE S TSIVVLSK Y +S WCLRELVKI+  K
Subjt:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK

Query:  DKTTHQVLPLFY
        DKT HQVLPLFY
Subjt:  DKTTHQVLPLFY

A0A5D3BN25 Prv splice variant B4.2e-2354.69Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN-------------------IDDTV--SDKIVKAIEDSRTSIVVLSKAYVS
        A S SHP + ++DVFLSF RD E        K LYE LS WG+K+FMDD+                   +DD V  SD IVKAIE S TSIVVL+K Y S
Subjt:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN-------------------IDDTV--SDKIVKAIEDSRTSIVVLSKAYVS

Query:  SNWCLRELVKIMNHKDKTTHQVLPLFYR
        S WCLRELVKI++ K+KT HQVLPLFYR
Subjt:  SNWCLRELVKIMNHKDKTTHQVLPLFYR

A0A6J1CK85 TMV resistance protein N-like isoform X24.2e-2342.69Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDN---IDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTT
        M AS S+P   SYD+FLSF R  ++  +   +LY+ L   G+  F DDN   I D +S+K+V+AIE SR+SIVVLSK Y SS WCLREL KI++   + +
Subjt:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDN---IDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTT

Query:  HQVLPLFYRLVPGDI---GKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSV
        H+VLP+FY + P D+       KK   EYE+++ +F    +N + +     E+Q WR+A+ K+ +L+ V V
Subjt:  HQVLPLFYRLVPGDI---GKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSV

Q5DMW3 MRGH101.1e-2361.61Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK
        A S SHP + ++D FLSF RD E        K LYE LS WG+K+FMDD      DD V  SD IVKAIE S TSIVVLSK Y +S WCLRELVKI+  K
Subjt:  AASLSHPWERSYDVFLSFCRDSESS--YSCTKHLYEILSGWGMKVFMDDN----IDDTV--SDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHK

Query:  DKTTHQVLPLFY
        DKT HQVLPLFY
Subjt:  DKTTHQVLPLFY

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq19.7e-1735.37Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTT
        M  S SH   RSYDVFLSF R  ++  +   HL+  L   G+  FMDD       ++S +++KAI +SR ++VV SK Y SS WCL ELVKI+   +K  
Subjt:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTT

Query:  HQVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS
          V+P+FY + P  +    +K   EY    ++F  ++++ +      +++  WR+A+ K+ ++S
Subjt:  HQVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS

O82500 Putative disease resistance protein At4g111704.5e-1438.79Show/hide
Query:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        MA+S S+ W   YDVF SF R  +   +   HL +     G+  F DD+I    T+  ++  AI +S+ S+V+ S+ Y SS+WCL EL++IM  K++   
Subjt:  MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFYRLVPGDIGK
        +V+P+FY++ P DI K
Subjt:  QVLPLFYRLVPGDIGK

Q40392 TMV resistance protein N1.0e-1835.8Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        ++S S  W  SYDVFLSF R  ++  + T HLYE+L+  G+K F DD       T+  ++ KAIE+S+ +IVV S+ Y +S WCL ELVKIM  K +   
Subjt:  AASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSL
         V+P+FY + P  +    +     +E+  +++             VE +Q WR A+ +  +L
Subjt:  QVLPLFYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSL

V9M2S5 Disease resistance protein RPV16.7e-1842.34Show/hide
Query:  SHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPL
        S P   +YDVFLSF R  ++ Y+ T HLY  L   G++ F DD +   + ++ +++KAIE+SR+S++V S+ Y  S WCL ELVKIM  +    H V P+
Subjt:  SHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPL

Query:  FYRLVPGDIGK
        FY + P  + K
Subjt:  FYRLVPGDIGK

V9M398 Disease resistance protein RUN11.1e-1743.86Show/hide
Query:  SHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMN-HKDKTT--HQV
        S P   +YDVFLSF R  ++ ++ T HLY  L   G++ F DD +   + ++ +++KAIE+SR+S++V S+ Y  S WCL ELVKIM  HKDK    H V
Subjt:  SHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNI--DDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMN-HKDKTT--HQV

Query:  LPLFYRLVPGDIGK
         P+FY + P  + K
Subjt:  LPLFYRLVPGDIGK

Arabidopsis top hitse value%identityAlignment
AT1G72840.1 Disease resistance protein (TIR-NBS-LRR class)4.9e-1634.42Show/hide
Query:  RSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPLFYRL
        R YDVFLSF R  ++  +   HLY  L   G+  F DD    I DT++D +VKAI+ S  ++V+LS+ Y +S WCL EL  IM    +   +VLP+FY +
Subjt:  RSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPLFYRL

Query:  VPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS
         P D+          Y++    F  +    +    + E++  WR A+ ++ +LS
Subjt:  VPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS

AT1G72840.2 Disease resistance protein (TIR-NBS-LRR class)4.9e-1634.42Show/hide
Query:  RSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPLFYRL
        R YDVFLSF R  ++  +   HLY  L   G+  F DD    I DT++D +VKAI+ S  ++V+LS+ Y +S WCL EL  IM    +   +VLP+FY +
Subjt:  RSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPLFYRL

Query:  VPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS
         P D+          Y++    F  +    +    + E++  WR A+ ++ +LS
Subjt:  VPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS

AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family3.1e-1837.34Show/hide
Query:  PWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIM-NHKDKTTHQVLPL
        P   +YDVF+SF R ++   +   HLY+ L   G+  FMDD      + +S +++ AIE S+  IVVL+K Y SS WCL ELV IM +HK+  +H V P+
Subjt:  PWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIM-NHKDKTTHQVLPL

Query:  FYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS
        F  + P DI    +  +  Y KS S        K   S  + +L+ WR+A+ K+ ++S
Subjt:  FYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS

AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family3.1e-1837.34Show/hide
Query:  PWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIM-NHKDKTTHQVLPL
        P   +YDVF+SF R ++   +   HLY+ L   G+  FMDD      + +S +++ AIE S+  IVVL+K Y SS WCL ELV IM +HK+  +H V P+
Subjt:  PWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIM-NHKDKTTHQVLPL

Query:  FYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS
        F  + P DI    +  +  Y KS S        K   S  + +L+ WR+A+ K+ ++S
Subjt:  FYRLVPGDIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLS

AT5G48770.1 Disease resistance protein (TIR-NBS-LRR class) family6.4e-1641.23Show/hide
Query:  AASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH
        ++SLS P   +YDVFLSF R  ++  +   HLY  L   G+  F DD    + D +S  + +AIE S+ ++VVLS+ Y +S WCL EL  IM   +    
Subjt:  AASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDD---NIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTH

Query:  QVLPLFYRLVPGDI
        +VLPLFY + P D+
Subjt:  QVLPLFYRLVPGDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTCATTATCTCATCCTTGGGAGAGAAGTTATGATGTTTTCTTAAGTTTCTGTAGAGATAGCGAAAGTAGCTATAGTTGTACAAAGCATTTATATGAGATTCT
GAGTGGATGGGGAATGAAGGTGTTTATGGATGATAATATTGATGATACTGTGAGTGATAAGATTGTGAAAGCAATTGAAGATTCAAGGACTTCCATTGTTGTTCTATCAA
AAGCTTATGTTTCTTCCAATTGGTGTTTGAGAGAATTGGTTAAGATTATGAATCACAAAGACAAGACTACACACCAAGTGCTTCCTTTGTTTTATCGTCTGGTTCCAGGT
GATATTGGGAAGGGTGATAAGAAAAGTAAATATGAATATGAAAAATCTGTTTCAAGATTCATTTATAGTGTGCTTAACAAAAAAAACAGAAGCTCAGTGGTGGAGGAGCT
TCAGGGGTGGAGAGACGCTATCAAAAAACTTAGATCTCTATCTAAAGTATCTGTCCCAATACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTTCATTATCTCATCCTTGGGAGAGAAGTTATGATGTTTTCTTAAGTTTCTGTAGAGATAGCGAAAGTAGCTATAGTTGTACAAAGCATTTATATGAGATTCT
GAGTGGATGGGGAATGAAGGTGTTTATGGATGATAATATTGATGATACTGTGAGTGATAAGATTGTGAAAGCAATTGAAGATTCAAGGACTTCCATTGTTGTTCTATCAA
AAGCTTATGTTTCTTCCAATTGGTGTTTGAGAGAATTGGTTAAGATTATGAATCACAAAGACAAGACTACACACCAAGTGCTTCCTTTGTTTTATCGTCTGGTTCCAGGT
GATATTGGGAAGGGTGATAAGAAAAGTAAATATGAATATGAAAAATCTGTTTCAAGATTCATTTATAGTGTGCTTAACAAAAAAAACAGAAGCTCAGTGGTGGAGGAGCT
TCAGGGGTGGAGAGACGCTATCAAAAAACTTAGATCTCTATCTAAAGTATCTGTCCCAATACAGTAA
Protein sequenceShow/hide protein sequence
MAASLSHPWERSYDVFLSFCRDSESSYSCTKHLYEILSGWGMKVFMDDNIDDTVSDKIVKAIEDSRTSIVVLSKAYVSSNWCLRELVKIMNHKDKTTHQVLPLFYRLVPG
DIGKGDKKSKYEYEKSVSRFIYSVLNKKNRSSVVEELQGWRDAIKKLRSLSKVSVPIQ