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Lsi08G001430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr08:3066655..3067115
RNA-Seq ExpressionLsi08G001430
SyntenyLsi08G001430
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88683.1 clp protease proteolytic subunit [Lagenaria siceraria]1.6e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ

QDK99971.1 ClpP [Siraitia grosvenorii]5.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

QTX96635.1 ClpP [Agrimonia pilosa var. nepalensis]1.3e-4197.75Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ
        GQ VDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPD+QTICMGLAASMGSFILVGGEITKRLAFPHARRQ
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ

YP_009456171.1 ATP-dependent Clp protease proteolytic subunit [Lagenaria siceraria]5.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

YP_009738226.1 ATP-dependent Clp protease proteolytic subunit [Siraitia siamensis]1.0e-4198.86Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLF+NSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

TrEMBL top hitse value%identityAlignment
A0A2I6C0C2 ATP-dependent Clp protease proteolytic subunit2.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

A0A514YKW3 ATP-dependent Clp protease proteolytic subunit2.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

A0A515BLK4 ATP-dependent Clp protease proteolytic subunit2.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

A0A7G9IT62 ATP-dependent Clp protease proteolytic subunit2.9e-42100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARR

X2F0D4 ATP-dependent Clp protease proteolytic subunit7.5e-43100Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ

SwissProt top hitse value%identityAlignment
P12210 ATP-dependent Clp protease proteolytic subunit3.3e-4397.7Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVDSEISNQLIGLMVYLSIED+TKDLYLFINSPGGWVIPGVAIYDTMQFVRPDV TICMGLAASMGSFILVGGEITKRLAFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

Q0G9T7 ATP-dependent Clp protease proteolytic subunit3.3e-4397.7Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVDSEISNQLIGLMVYLSIE+DTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFIL GGEITKRLAFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

Q33C07 ATP-dependent Clp protease proteolytic subunit3.3e-4397.7Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVDSEISNQLIGLMVYLSIED+TKDLYLFINSPGGWVIPGVAIYDTMQFVRPDV TICMGLAASMGSFILVGGEITKRLAFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

Q3C1K4 ATP-dependent Clp protease proteolytic subunit3.3e-4397.7Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVDSEISNQLIGLMVYLSIED+TKDLYLFINSPGGWVIPGVAIYDTMQFVRPDV TICMGLAASMGSFILVGGEITKRLAFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

Q9M3K5 ATP-dependent Clp protease proteolytic subunit1.1e-4398.85Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDV TICMGLAASMGSFILVGGEITKRLAFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 56.1e-2148.28Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        G  VD +++N ++  ++YL   D TKD+ +++NSPGG V  G+AI+DTM+ +RPDV T+C+GLAASMG+F+L  G   KR + P++R
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

AT1G12410.1 CLP protease proteolytic subunit 28.3e-1843.68Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQ +D E SNQ++  M+YL   DD++ +Y+++N PGG + P +AIYDTM+ ++  V T C+GLA ++  F+L  GE   R A P +R
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

AT1G66670.1 CLP protease proteolytic subunit 33.1e-1743.68Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        G +VD   ++ +I  ++ L  ED  +D+ LFINSPGG +  G+ IYD M+  + DV T+C+GLAASMG+F+L  G   KR   P+++
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR

AT5G23140.1 nuclear-encoded CLP protease P74.5e-1640.96Show/hide
Query:  VDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHA
        ++ + S+ ++  ++YL  E+ +K +++++NSPGG V  G+AIYDTMQ++R  + TIC+G AASM S +L  G   +R + P+A
Subjt:  VDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHA

ATCG00670.1 plastid-encoded CLP P4.5e-4088.51Show/hide
Query:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR
        GQEVD+EISNQLI LM+YLSIE DTKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SFILVGG ITKR+AFPHAR
Subjt:  GQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCAAGAGGTTGATAGCGAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGATACCAAAGATCTGTATTTATTTATAAACTCTCC
CGGTGGATGGGTAATACCCGGAGTAGCTATTTATGATACTATGCAATTTGTGCGACCAGATGTACAGACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTTATTC
TGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCCTCACGCTCGGCGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCCAAGAGGTTGATAGCGAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGATACCAAAGATCTGTATTTATTTATAAACTCTCC
CGGTGGATGGGTAATACCCGGAGTAGCTATTTATGATACTATGCAATTTGTGCGACCAGATGTACAGACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTTATTC
TGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCCTCACGCTCGGCGCCAATGA
Protein sequenceShow/hide protein sequence
MEGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPHARRQ