CuGenDBv2

Gene ID	Lsi08G001470
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Chloroplast envelope membrane protein
Genome location	chr08:3082979..3083529
RNA-Seq Expression	Lsi08G001470
Synteny	Lsi08G001470
Gene Ontology terms	GO:1902600 - proton transmembrane transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR004282 - Chloroplast envelope membrane protein, CemA

Homology

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GenBank top hits

e value

%identity

Alignment

ARC97206.1 envelope membrane protein [Geum macrophyllum]

4.9e-26

76.47

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS+YKD    Y  +I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

YP_009236292.1 chloroplast envelope membrane protein [Gynostemma pentaphyllum]

6.5e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

YP_009430639.1 envelope membrane protein [Gynostemma cardiospermum]

6.5e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

YP_009439990.1 envelope membrane protein [Gynostemma pentagynum]

6.5e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

YP_010015151.1 envelope membrane protein [Gynostemma yixingense]

6.5e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

TrEMBL top hits

e value

%identity

Alignment

A0A109X099 envelope membrane protein, chloroplastic

3.1e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

A0A1V0IL50 Chloroplast envelope membrane protein

2.4e-26

76.47

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS+YKD    Y  +I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

A0A291IAX7 envelope membrane protein, chloroplastic

3.1e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

A0A291IB67 envelope membrane protein, chloroplastic

3.1e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

A0A291IBD4 envelope membrane protein, chloroplastic

3.1e-26

81.33

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD   ++  +I   L+ +
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

SwissProt top hits

e value

%identity

Alignment

B1NWG2 Chloroplast envelope membrane protein

1.2e-27

74.12

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYSIL NEEL+ILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD    +  +I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

Q0G9K7 Chloroplast envelope membrane protein

1.9e-28

100

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD

Q2L922 Chloroplast envelope membrane protein

5.5e-28

74.12

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYSILGNEEL+ILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS+YKD    +  +I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

Q2QD77 Chloroplast envelope membrane protein

1.1e-28

76.47

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD    +  +I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

Q71E53 Chloroplast envelope membrane protein

5.5e-28

81.08

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Query:  YSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES
        YSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD    + ++I   L+ +
Subjt:  YSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIES

Arabidopsis top hits

e value

%identity

Alignment

AT4G31040.1 CemA-like proton extrusion protein-related

8.7e-05

48.57

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Query:  EFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMI
        + + N+SDT KAF I+L+TD+ +G+HS  GWE ++
Subjt:  EFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMI

ATCG00530.1 CemA-like proton extrusion protein-related

2.4e-26

68.24

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Query:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF
        GYS  G E+L ILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIG +YKD    + ++I   L+ S+    LD +F
Subjt:  GYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLF

Sequences

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CDS sequence

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ATGAGGAAAGGAAGAGATGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTTT
TTCTATTCTTTTATTAACTGATTTATGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTGGATACTTTTTACATCCAAAGGA
TTTACTTGTTACTAATAGAGTCTAGCCTATGTTCTTCTTTAGATCCCTTGTTTCACTCCGATAGTAAAGGAGCCGTATGA

mRNA sequence

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Protein sequence

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MRKGRDGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDLDTFYIQRIYLLLIESSLCSSLDPLFHSDSKGAV

Lsi08G001470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome