; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsingle-stranded DNA-binding protein WHY2, mitochondrial
Genome locationchr08:3653988..3665131
RNA-Seq ExpressionLsi08G001780
SyntenyLsi08G001780
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006952 - defense response (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:1990391 - DNA repair complex (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR009044 - ssDNA-binding transcriptional regulator
IPR013742 - Whirly transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607541.1 Single-stranded DNA-binding protein WHY2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.4e-10880.75Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQ+VCKK GHV H  GSHPFSS V IP     Q FTHT      + KN +DRVYA+YNVYKGKAG+SM PCLPTFTKLESGSLVIDRRGS++L+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQ F+L+PTEVGTLISLGPRDSCEFFHDPGMLSS+AGQVRKSLTIKAHADGNGYFISLNVV+N+Q+TK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALPHILGWDRLT+PS GM K FQPNKV+RE LSLEW+R
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

XP_022157229.1 single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Momordica charantia]9.4e-11385.42Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQIVCKK G+VGHP GSH FSSRV IPD  SRQNFT T      +TKNA DRVYASYNVYKGKAG+SMMPCLPTFTKL+SG+LVI RRGSVML+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQLF+LS TE+GTLISLGPRDSCEFFHDPGMLSS+AGQVRKSLTIK+HADGNGYFISLNVVNN QNTK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPS-PGMGKVFQPNKVDREALSLEWER
        FALPHILGWD+LT+PS  GMGKV QPNKVDREALSLEWER
Subjt:  FALPHILGWDRLTQPS-PGMGKVFQPNKVDREALSLEWER

XP_022973421.1 single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita maxima]3.1e-10881.59Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQ+VCKK  HV H  GSHPFSS V IP    RQNFTHT      + KN +DRVYA+YNVYKGKAG+SM PCLPTFTKL+SGSLV+DRRGSV+L+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQ F+LSPTEVGTLISLGPRDSCEFFHDPGMLSS+AGQVRKSLTIKAHADGNGYFISLNVVNN+Q+TK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALPHILGWDRLT+PS  M K FQPNKV+RE LSLEWER
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

XP_023523845.1 single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita pepo subsp. pepo]1.6e-10780.33Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQ+VCKK GHV H  GSHPFSS V IP     Q FTHT      + KN +DRVYA+YNVYKGKAG+SM PCLPTFTKLESGSLVIDRRGS++L+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQ F+LSPTEVGTLI+LGPRDSCEFFHDPGMLSS+AGQVRKSLTIKAHADGNGYFISLNVV+N+++TK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALPHILGWDRLT+PS GM K FQPNKV+RE LSLEW+R
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

XP_038891064.1 single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida]7.5e-11888.28Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQIVCKK GHVGHPLGSHPFSSRV IPD  SRQNFT T      + +NASDRVYA+Y+VYKGKAGLSMMPCLPTFTKLESG LVI RRGS+ML+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNS+NTK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        F LPHILGWD+L +PSPGMGKVFQPNKVDREALSLEWER
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

TrEMBL top hitse value%identityAlignment
A0A0A0KXS2 Uncharacterized protein1.6e-10275.73Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQIV KK G+VGHPLGSHPFSS   I D  S QNFT T      +TKNA  RV+ASY+VYKGKA LSM PC+PTFTK+ESG+ ++DRRGS+ML+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PA+GERKYDWT+KQLFALS TE+G+LISLGPRDSCEFFHDPGMLSS+AGQVRKSL IKAH DGNGYF SLNVVN  QNT D+LSVPFT GEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALP +LGWDR+T P+ G+G VFQP K+DREALSLEWER
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

A0A1S3CBJ9 single-stranded DNA-bindig protein WHY2, mitochondrial2.9e-9972.8Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQIVCKK G+VGHPLGSHPFS+R  IP+    QNFTHT      +TKNA  R + SY+VYKGKA +S+ PC+PTFTK+ESG+L+IDRRGS+ML+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PA+GERKYDWT+KQLFALS TEVG+LIS+GP+DSCEFFHDPGMLSS+AGQVRK+L IKAH DGNGY ISLNVVN  QNT DFLS+PFT GEFSV+KTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALP +LGWDR+  P+ GMG  FQ  ++DREALSLEWER
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

A0A6J1DVW8 single-stranded DNA-bindig protein WHY2, mitochondrial isoform X24.6e-11385.42Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQIVCKK G+VGHP GSH FSSRV IPD  SRQNFT T      +TKNA DRVYASYNVYKGKAG+SMMPCLPTFTKL+SG+LVI RRGSVML+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQLF+LS TE+GTLISLGPRDSCEFFHDPGMLSS+AGQVRKSLTIK+HADGNGYFISLNVVNN QNTK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPS-PGMGKVFQPNKVDREALSLEWER
        FALPHILGWD+LT+PS  GMGKV QPNKVDREALSLEWER
Subjt:  FALPHILGWDRLTQPS-PGMGKVFQPNKVDREALSLEWER

A0A6J1F1U6 single-stranded DNA-binding protein WHY2, mitochondrial1.3e-10780.33Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQ+VCKK GHV H  GSHPFSS V IP     Q FT+T      + KN +DRVYA+YNVYKGKAG+SM PCLPTFTKLESGSLVIDRRGS++L+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQ F+L+PTEVGTLISLGPRDSCEFFHDPGMLSS+AGQVRKSL+IKAHADGNGYFISLNVVNN+Q+TK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALPHILGWDRLT+PS GM K FQPNKV+RE LSLEW+R
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

A0A6J1I8L3 single-stranded DNA-binding protein WHY2, mitochondrial1.5e-10881.59Show/hide
Query:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV
        +QLFEQ+VCKK  HV H  GSHPFSS V IP    RQNFTHT      + KN +DRVYA+YNVYKGKAG+SM PCLPTFTKL+SGSLV+DRRGSV+L+F 
Subjt:  SQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFV

Query:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS
        PAIGERKYDWTKKQ F+LSPTEVGTLISLGPRDSCEFFHDPGMLSS+AGQVRKSLTIKAHADGNGYFISLNVVNN+Q+TK+FLSVPFTAGEFSVMKTACS
Subjt:  PAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACS

Query:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        FALPHILGWDRLT+PS  M K FQPNKV+RE LSLEWER
Subjt:  FALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

SwissProt top hitse value%identityAlignment
B2LXS7 Single-stranded DNA-binding protein WHY1, chloroplastic3.4e-4144.02Show/hide
Query:  RVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSL
        RV+ SY++YKGKA LS  P  P F  L+SG+  + + G V+L F PA+  R+YDWT+KQ+F+LS  E+GTL++LGP DSCEFFHDP    S  G+VRK L
Subjt:  RVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSL

Query:  TIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
         I+   DGNG F +L+V N   N  + + +P T GEF+V+ +  ++ +PH++GW   T  S    +  +P    +     EW R
Subjt:  TIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

D9J034 Single-stranded DNA-binding protein WHY2, mitochondrial4.6e-6262.16Show/hide
Query:  RVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSL
        RV+A Y+V+KGKA LS  P LPTF +L+SG + ++RRG +ML+F P++GERKYDW K+QLFALS TEVG+LIS+G RDS EFFHDP MLSS+AGQVRKSL
Subjt:  RVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSL

Query:  TIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT-QPSPGMGKVFQPNKVDREALSLEWER
        +IK +ADG+GYFISL+VVNN+  T D  +VP T  EF+VM+TA SFALPHI+GWDR T +PS  + +   P+KV  + +  EW+R
Subjt:  TIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT-QPSPGMGKVFQPNKVDREALSLEWER

Q8VYF7 Single-stranded DNA-binding protein WHY2, mitochondrial2.5e-6067.5Show/hide
Query:  SDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRK
        S R++A Y+++KGKA LS+ P LP+FT+++SG+L IDRRGS+M++F+PAIGERKYDW KKQ FALSPTEVG+LIS+G +DS EFFHDP M SS+AGQVRK
Subjt:  SDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRK

Query:  SLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT
        SL++K HADG+GYFISL+V N+   T D+  VP T  EF+VMKTA SFALPHI+GW+RLT
Subjt:  SLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT

Q9LL85 Single-stranded DNA-binding protein WHY1, chloroplastic5.3e-4242.25Show/hide
Query:  ASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVR
        ++ +V+  Y++YKGKA L++ P  P F+ L+SG+  + R G VML F PA G R+YDW++KQ+F+LS TE+G++ISLG +DSCEFFHDP    S  G+VR
Subjt:  ASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVR

Query:  KSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER
        K L ++   DG+G+F +L+V N   N  + + +P T  EF+V+ +A +F +P++LGW                N   R    LEW R
Subjt:  KSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER

Q9M9S3 Single-stranded DNA-binding protein WHY1, chloroplastic1.0e-4038.89Show/hide
Query:  FSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEV
        FS +    D   +Q F  + SS     +    R Y  +++YKGKA L++ P  P F  L+SG+  + + G ++L F P+ G R+YDW+KKQ+F+LS TE+
Subjt:  FSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEV

Query:  GTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DR
        GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N   N  + + +P T  EF+V+ +A +F LP+++GW             R
Subjt:  GTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DR

Query:  LTQPSPGMGKVFQPNK
        +   SP  G  ++ N+
Subjt:  LTQPSPGMGKVFQPNK

Arabidopsis top hitse value%identityAlignment
AT1G14410.1 ssDNA-binding transcriptional regulator7.1e-4238.89Show/hide
Query:  FSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEV
        FS +    D   +Q F  + SS     +    R Y  +++YKGKA L++ P  P F  L+SG+  + + G ++L F P+ G R+YDW+KKQ+F+LS TE+
Subjt:  FSSRVDIPDSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEV

Query:  GTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DR
        GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N   N  + + +P T  EF+V+ +A +F LP+++GW             R
Subjt:  GTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DR

Query:  LTQPSPGMGKVFQPNK
        +   SP  G  ++ N+
Subjt:  LTQPSPGMGKVFQPNK

AT1G71260.1 WHIRLY 21.8e-6167.5Show/hide
Query:  SDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRK
        S R++A Y+++KGKA LS+ P LP+FT+++SG+L IDRRGS+M++F+PAIGERKYDW KKQ FALSPTEVG+LIS+G +DS EFFHDP M SS+AGQVRK
Subjt:  SDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRK

Query:  SLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT
        SL++K HADG+GYFISL+V N+   T D+  VP T  EF+VMKTA SFALPHI+GW+RLT
Subjt:  SLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT

AT2G02740.1 ssDNA-binding transcriptional regulator1.3e-4044.13Show/hide
Query:  DSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGP
        D   +Q F  + SS     + +S R Y  +++YKGKA L++ P  P F  LESG+  + + G ++L F PA G R+YDW++KQ+F+LS TE+G L+SLGP
Subjt:  DSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGP

Query:  RDSCEFFHDPGM-LSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW
        R+SCEFFHDP     S  G+VRK L ++   DG+G F +L+V N   N  + + +P T  EF+V+ +A +F LPH++GW
Subjt:  RDSCEFFHDPGM-LSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW

AT2G02740.2 ssDNA-binding transcriptional regulator2.7e-4143.82Show/hide
Query:  DSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGP
        D   +Q F  + SS     + +S R Y  +++YKGKA L++ P  P F  LESG+  + + G ++L F PA G R+YDW++KQ+F+LS TE+G L+SLGP
Subjt:  DSISRQNFTHTGSSGLFLTKNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGP

Query:  RDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW
        R+SCEFFHDP       G+VRK L ++   DG+G F +L+V N   N  + + +P T  EF+V+ +A +F LPH++GW
Subjt:  RDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGGCTCTTTCATCATCCCTTTCCCCTTTATGCTTTAGTTTTGGAAGGAGGGATGTCTAGCTTTGAATCCTTGTTCGTCCCAAGTTTGGACGGTGAAGTTCTTTG
TGTGGTTTGCATTGAAGGGTTAACACCTTGGATCGGATCTCGGCTAGAGGGTCTTTGGAGGTCGGGCTGGAGCCAGCTATTTGAACAAATTGTGTGTAAGAAAGTTGGTC
ATGTTGGACATCCTTTGGGGTCGCATCCTTTCTCATCTCGGGTTGACATTCCAGATTCTATATCTAGACAGAATTTTACTCATACAGGGTCAAGTGGGTTGTTCCTCACA
AAGAATGCAAGTGATCGAGTTTATGCTTCTTATAATGTATATAAGGGCAAAGCTGGACTCTCTATGATGCCTTGTTTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCT
TGTAATTGATCGACGTGGTTCAGTAATGCTGTCATTTGTTCCTGCCATAGGCGAGCGCAAGTATGACTGGACAAAGAAACAGTTGTTTGCATTGTCCCCAACAGAGGTTG
GTACTTTAATCAGTTTGGGTCCCAGAGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTTCTGCTGGTCAAGTAAGGAAGAGCTTAACAATTAAGGCCCAT
GCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACTCACAGAACACCAAAGATTTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGAC
GGCTTGCAGTTTTGCTCTGCCTCACATTCTTGGTTGGGACCGGCTGACCCAACCTAGTCCTGGCATGGGTAAGGTTTTTCAACCAAATAAGGTGGATCGTGAAGCATTGA
GTTTAGAGTGGGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGGCTCTTTCATCATCCCTTTCCCCTTTATGCTTTAGTTTTGGAAGGAGGGATGTCTAGCTTTGAATCCTTGTTCGTCCCAAGTTTGGACGGTGAAGTTCTTTG
TGTGGTTTGCATTGAAGGGTTAACACCTTGGATCGGATCTCGGCTAGAGGGTCTTTGGAGGTCGGGCTGGAGCCAGCTATTTGAACAAATTGTGTGTAAGAAAGTTGGTC
ATGTTGGACATCCTTTGGGGTCGCATCCTTTCTCATCTCGGGTTGACATTCCAGATTCTATATCTAGACAGAATTTTACTCATACAGGGTCAAGTGGGTTGTTCCTCACA
AAGAATGCAAGTGATCGAGTTTATGCTTCTTATAATGTATATAAGGGCAAAGCTGGACTCTCTATGATGCCTTGTTTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCT
TGTAATTGATCGACGTGGTTCAGTAATGCTGTCATTTGTTCCTGCCATAGGCGAGCGCAAGTATGACTGGACAAAGAAACAGTTGTTTGCATTGTCCCCAACAGAGGTTG
GTACTTTAATCAGTTTGGGTCCCAGAGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTTCTGCTGGTCAAGTAAGGAAGAGCTTAACAATTAAGGCCCAT
GCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACTCACAGAACACCAAAGATTTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGAC
GGCTTGCAGTTTTGCTCTGCCTCACATTCTTGGTTGGGACCGGCTGACCCAACCTAGTCCTGGCATGGGTAAGGTTTTTCAACCAAATAAGGTGGATCGTGAAGCATTGA
GTTTAGAGTGGGAAAGATGAGTGTTCATAGGAGTTGTCATCTCCATGAAGCTGCTAACTTCAAAAGTGGGCTACTGTACCTGTTTTTTTTGGGTAAGCTTTTGTCAGCTC
TTCAACTATTGTAGTGATGGATGTAATCCTTAGAATTTTGCTTTACAGAAACTCTAGTTGGCGTCAGAGTACTAGATAATTGTTGGTATCTGAAAGGCAGTGGTTTATTT
GGATGGAACTTACCATTTCAAAAATTGAAAGAACAATGTACCCAAGTACTATTTGGGCTACCCTCATTTTGGCAACTTAGGGTGAGTTAGAGATTGCTTTTGGAAGTTTA
TCTATTTTTAGCATGATAAAATTACTCTTCAAAATGCTTCTAGCCTATTTTTCGCATGACATCACCAATCTCTTCAAATTTACCTGAATATTCTTAGGTATCAATTCTGA
TTATGTTTGGAGCAGGTTTTTTTGGGTTAATGATATGTTTTAATTAGTTGAGACATGCTCAACTGATGTGTTTAGAGTAGACTTAAATGTAGAAATCTTTATCAAAAGTC
ATTGTCAAGTGCTCAAAATTGCATGACTTT
Protein sequenceShow/hide protein sequence
MFWLFHHPFPLYALVLEGGMSSFESLFVPSLDGEVLCVVCIEGLTPWIGSRLEGLWRSGWSQLFEQIVCKKVGHVGHPLGSHPFSSRVDIPDSISRQNFTHTGSSGLFLT
KNASDRVYASYNVYKGKAGLSMMPCLPTFTKLESGSLVIDRRGSVMLSFVPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAH
ADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPSPGMGKVFQPNKVDREALSLEWER