; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 24
Genome locationchr08:3829949..3833953
RNA-Seq ExpressionLsi08G001800
SyntenyLsi08G001800
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656046.1 RNA-binding protein 24 isoform X1 [Cucumis sativus]3.9e-14594.04Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKH-------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKH        GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKH-------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

XP_016902398.1 PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo]3.5e-14696.4Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA
        STPKH GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA
Subjt:  STPKHGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA

Query:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

XP_022930181.1 RNA-binding protein 24 isoform X3 [Cucurbita moschata]5.8e-14192.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
        STPKH  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
Subjt:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        YPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SGVTMALP PIPHR
Subjt:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

XP_038890037.1 RNA-binding protein 24 isoform X1 [Benincasa hispida]3.9e-14592.39Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKH------------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG
        STPKH            GGGG GGRNFRVLSS FQTGFGGNVGSAFHSPTTFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPG
Subjt:  STPKH------------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG

Query:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        GILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS  INS+AATTF QHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

XP_038890039.1 RNA-binding protein 24 isoform X3 [Benincasa hispida]4.1e-14795.37Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAA
        STPKHGGGGG    GGRNFRVLSS FQTGFGGNVGSAFHSPTTFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAA
Subjt:  STPKHGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAA

Query:  AAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        AAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS  INS+AATTF QHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  AAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A1S4E2E1 RNA-binding protein 24 isoform X11.9e-14594.04Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKH-------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKH        GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKH-------GGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

A0A1S4E2E8 RNA-binding protein 24 isoform X31.7e-14696.4Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA
        STPKH GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA
Subjt:  STPKHGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA

Query:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

A0A6J1DU09 RNA-binding protein 24 isoform X36.2e-14191.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+NLA+QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
        STPKH  GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYA+QQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGI++GAAAAAAAF
Subjt:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        YPYFQFGEGSGGG       GSGQQ GYGVQYPHHLFQYSA INS +AT+FPQHYAAPPMSLPPTPPTL SGVTMALPAPIPHR
Subjt:  YPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

A0A6J1EQ81 RNA-binding protein 24 isoform X32.8e-14192.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
        STPKH  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
Subjt:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        YPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SGVTMALP PIPHR
Subjt:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

A0A6J1IAD7 RNA-binding protein 24 isoform X32.8e-14192.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
        STPKH  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
Subjt:  STPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR
        YPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SGVTMALP PIPHR
Subjt:  YPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
Q6GQD3 RNA-binding protein 24-A7.9e-2439.15Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP   + G   G 
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSG
         +    L   Q  FG        +   +P   +Q G+           P  +  TS Y  Y   +A Y  Y          AAAAAAA+  Y      + 
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSG

Query:  GGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
         G     GYG   P  L   + G  + AA  F Q+
Subjt:  GGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q6P8A7 RNA-binding protein 247.1e-2540.34Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP   + G   G 
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGE
         +    L   Q  FG        +   +PH  +Q G  IP+      +S SP   Y ++ Y       AQY           S AAAAAAA+  Y     
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGE

Query:  GSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
         +  G     GYG   P  L   + G  + AA  F Q+
Subjt:  GSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q9BX46 RNA-binding protein 246.0e-2440.74Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP   + G   G 
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF--YPYFQFGEG
         +    L   Q  FG        +   +P   +Q G+   +  +   +   +  T Y +  G A AQY           + AAAAAAA+  YPY      
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF--YPYFQFGEG

Query:  SGGGGSGQQGYGVQYP
        +G   +G  GY VQ P
Subjt:  SGGGGSGQQGYGVQYP

Q9I8B3 RNA-binding protein 24-B6.0e-2439.08Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP   + G   G 
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGE
         +    L     G   +          +P   +QQG  IP+      +S SP   Y ++ Y       AQY             AAAAAAA+  Y     
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGE

Query:  GSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
         +  G     GYG   P  L   + G  + AA  F Q+
Subjt:  GSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q9M1S3 Probable RNA-binding protein ARP11.3e-2638.35Show/hide
Query:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLG--VQRSK
        T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++  AA RAC D+ P+I+GRRANCNLASLG  +++S 
Subjt:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLG--VQRSK

Query:  PSTPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAA
          T    G   G R      +     G +  S ++ P+ F +   Q    Q +P+  YGY S    Y  P   +N   G      M G          + 
Subjt:  PSTPKHGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAA

Query:  AAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPP
            +Y +  +G G    G  S    +   YP+H  Q         A  FPQ   + P+S   TPP
Subjt:  AAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-6357.66Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG 
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG

Query:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF
              ++S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A  FYP    
Subjt:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF

Query:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL
            GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-6357.66Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG 
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG

Query:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF
              ++S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A  FYP    
Subjt:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF

Query:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL
            GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-6254.68Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG 
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG

Query:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF
              ++S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A  FYP    
Subjt:  GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAAAAFYPYFQF

Query:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPI
            GG G  Q      + HHL  Y+           P HY+ P  S+        S  T +   P+
Subjt:  GEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-7060.8Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H  G  G
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEG
        GR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY+YPT SYYNVYGGATAQ+PMYG+GP  +   AAA AA FYPY QF EG
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEG

Query:  SGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP
        +G       GY  + YP+H+F YSA         +P H+   P+SL P+P
Subjt:  SGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-7261.04Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H  G  G
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGG

Query:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGS
        GR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY+YPTSYYNVYGGATAQ+PMYG+GP  +   AAA AA FYPY QF EG+
Subjt:  GRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGS

Query:  GGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP
        G       GY  + YP+H+F YSA         +P H+   P+SL P+P
Subjt:  GGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATCTAACTTGGCAAGTCAGTTTGGAGATACCACTTACACAAAGGTTTTTGTGGGTGGTTTGGCTTGGGAGACTCACAAAGATACCATGAAGAAATACTTTGA
ACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAGGCCACTGGACGATCCAAAGGCTATGGATTTGTCACGTTCCGAGAACCCGATGCAGCCATGAGAGCTT
GTGTTGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAACGATCCAAACCCTCCACGCCTAAACACGGAGGAGGAGGAGGT
GGAGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTTCCCTCATTATGCTATCCAGCAAGG
GATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCTGACTACAGTTACCCTACGAGCTATTACAATGTGTATGGCGGGGCAACTGCACAGTATCCCATGTACGGTA
CGGGACCCGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCATTCTACCCTTATTTTCAATTTGGGGAAGGAAGCGGTGGCGGCGGTTCGGGACAGCAAGGGTAT
GGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGGCGGGGATTAATTCAACTGCTGCGACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTGCCTCCCAC
ACCCCCCACTTTGTCATCAGGCGTGACCATGGCTCTTCCTGCACCTATCCCACATCGCTAG
mRNA sequenceShow/hide mRNA sequence
TGCCTCCTTGGTGGGCTCTCAATTCTCAATATAATTTCACATCATGACTCCATCTAACTTGGCAAGTCAGTTTGGAGATACCACTTACACAAAGGTTTTTGTGGGTGGTT
TGGCTTGGGAGACTCACAAAGATACCATGAAGAAATACTTTGAACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAGGCCACTGGACGATCCAAAGGCTAT
GGATTTGTCACGTTCCGAGAACCCGATGCAGCCATGAGAGCTTGTGTTGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCA
ACGATCCAAACCCTCCACGCCTAAACACGGAGGAGGAGGAGGTGGAGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTT
TTCATTCACCAACAACTTTCCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCTGACTACAGTTACCCTACGAGCTATTAC
AATGTGTATGGCGGGGCAACTGCACAGTATCCCATGTACGGTACGGGACCCGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCATTCTACCCTTATTTTCAATT
TGGGGAAGGAAGCGGTGGCGGCGGTTCGGGACAGCAAGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGGCGGGGATTAATTCAACTGCTGCGACAACTT
TCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTGCCTCCCACACCCCCCACTTTGTCATCAGGCGTGACCATGGCTCTTCCTGCACCTATCCCACATCGCTAGAGACAA
GAGTTCTCATCATCCTCAAACTCCTCTCCAATTTGCTTCTTCAAATGTCACTTCAAACCAAAAAGAAACCAACTCAACCTTTGCCCTAACCATGGTTCAATCTCTTTCTC
TCTTCTTCTTCACCTCTAACACACTACTCACTCATGCCTTTATAAGCATATTATATGCTTTTTTGGCCATTCCCAGCCCCCCATAGGGGCTACCCTCAAACCCAACCATA
CCAAATTCTCACCTCCAAAATTGGAGCAAAATCATGCATTTCTC
Protein sequenceShow/hide protein sequence
MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGG
GGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGY
GVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGVTMALPAPIPHR