CuGenDBv2

Gene ID	Lsi08G001840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NAC domain-containing protein
Genome location	chr08:3971024..3971488
RNA-Seq Expression	Lsi08G001840
Synteny	Lsi08G001840
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039358.1 protein BEARSKIN2-like [Cucumis melo var. makuwa]

8.1e-76

92.9

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

TYK00541.1 protein BEARSKIN2-like [Cucumis melo var. makuwa]

8.1e-76

92.9

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

XP_004141610.1 protein BEARSKIN2 [Cucumis sativus]

4.2e-72

89.74

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        +HRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LP SS+AYDYPALSSLPPD PLM KQLMSNNPET QPTDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGE-MDFWGYAK
        + EPWAMLDRLVTSHLGNE+S+KDVRF+DEHGSSSVSQINQLSLRGE MDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGE-MDFWGYAK

XP_008459499.1 PREDICTED: protein BEARSKIN2-like [Cucumis melo]

8.1e-76

92.9

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

XP_038890265.1 protein BEARSKIN2-like [Benincasa hispida]

1.9e-69

88.46

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHR+SQYQLRQPQQNYASHPTFELNKSDLALHYIPTP P SHNFPHHHLFHPNLS +KP LPGSSAAYDYPALSSLPPDAPLMVKQLMSNN ETGQPTDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVS-QINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDSNKDVRF+   GSSSVS QINQLS+  EM F GYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVS-QINQLSLRGEMDFWGYAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXR9 NAC domain-containing protein

2.0e-72

89.74

Show/hide

Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        +HRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LP SS+AYDYPALSSLPPD PLM KQLMSNNPET QPTDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGE-MDFWGYAK
        + EPWAMLDRLVTSHLGNE+S+KDVRF+DEHGSSSVSQINQLSLRGE MDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGE-MDFWGYAK

A0A1S3CBJ4 protein BEARSKIN2-like

3.9e-76

92.9

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

A0A5A7T906 Protein BEARSKIN2-like

3.9e-76

92.9

Show/hide

Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

A0A5D3BL49 Protein BEARSKIN2-like

3.9e-76

92.9

Show/hide

Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG
        MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPP PSH FPHHHLFHPNLST+KP LPGSS+AYDYPALSS+PPD PLMVKQLMSNNPETGQ TDG
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKP-LPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDG

Query:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
        M EPWAMLDRLVTSHLGNEDS+KDVRF+DEHGSSSVSQINQLSLRGEMDFWGYAK
Subjt:  MAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

A0A6J1IAC2 protein BEARSKIN2-like

4.2e-62

81.65

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTL----KPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQP
        MHRESQYQLRQP QNYAS PTFELNKSDLALHY+P+  PPSH FP HHLFHPN+ST+    K L  +S AYDYP LSSLPPD PLMVKQLMS NPET QP
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTL----KPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQP

Query:  TDGMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK
         DGM EPWAMLDRLVTSHLGNEDS+KDVRFEDEHG SSVSQINQLS+RGEMDFW YAK
Subjt:  TDGMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

SwissProt top hits

e value

%identity

Alignment

Q9SV87 Protein BEARSKIN2

3.7e-15

39.13

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Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPT--PPPPSHNFPHHHLFHPNLSTLKPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTD
        MHR+S YQL    +N+ +  TFELNK DLALH  P     PPS  F +        S L     S+A+       +  P   +   + ++++        
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPT--PPPPSHNFPHHHLFHPNLSTLKPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTD

Query:  GMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSS-----VSQINQLSLRGEMDFWGYAK
        G+ E WAM+DRLVT H+GNEDS++ + +ED + +SS     V   NQL+LR EMDFWGY+K
Subjt:  GMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSS-----VSQINQLSLRGEMDFWGYAK

Arabidopsis top hits

e value

%identity

Alignment

AT4G10350.1 NAC domain containing protein 70

2.6e-16

39.13

Show/hide

Query:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPT--PPPPSHNFPHHHLFHPNLSTLKPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTD
        MHR+S YQL    +N+ +  TFELNK DLALH  P     PPS  F +        S L     S+A+       +  P   +   + ++++        
Subjt:  MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPT--PPPPSHNFPHHHLFHPNLSTLKPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTD

Query:  GMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSS-----VSQINQLSLRGEMDFWGYAK
        G+ E WAM+DRLVT H+GNEDS++ + +ED + +SS     V   NQL+LR EMDFWGY+K
Subjt:  GMAEPWAMLDRLVTSHLGNEDSNKDVRFEDEHGSSS-----VSQINQLSLRGEMDFWGYAK

Sequences

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CDS sequence

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ATGCATAGAGAATCTCAATACCAACTCCGCCAACCCCAACAAAACTACGCTTCCCATCCCACATTTGAGCTCAACAAATCCGACCTAGCCCTACATTACATCCCAACCCC
ACCCCCACCTTCCCATAATTTCCCCCACCACCACCTCTTTCACCCTAACCTTTCCACCCTCAAGCCCCTCCCCGGCTCGTCCGCCGCCTACGACTACCCGGCCCTCTCGT
CCTTGCCACCCGACGCCCCCCTCATGGTCAAACAACTCATGTCTAATAATCCCGAGACCGGCCAACCGACTGACGGTATGGCCGAACCCTGGGCCATGTTGGATCGGCTC
GTCACGTCTCATCTTGGGAATGAGGATTCGAATAAGGATGTGAGGTTCGAGGACGAACACGGGTCGTCGTCGGTGAGTCAAATCAATCAGCTTTCGTTGAGAGGAGAGAT
GGACTTTTGGGGGTACGCTAAATAA

mRNA sequence

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Protein sequence

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MHRESQYQLRQPQQNYASHPTFELNKSDLALHYIPTPPPPSHNFPHHHLFHPNLSTLKPLPGSSAAYDYPALSSLPPDAPLMVKQLMSNNPETGQPTDGMAEPWAMLDRL
VTSHLGNEDSNKDVRFEDEHGSSSVSQINQLSLRGEMDFWGYAK

Lsi08G001840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome