; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr08:4030824..4033303
RNA-Seq ExpressionLsi08G001910
SyntenyLsi08G001910
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-14591.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]6.0e-14691.41Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKTVALFGKKPAAP+KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_008459494.1 PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]1.3e-14591.75Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA   PSASSPATFKTVALFGKKPAAPSKPKP+  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]5.0e-14591.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]2.8e-15194.5Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic2.9e-14691.41Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKTVALFGKKPAAP+KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic6.4e-14691.75Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA   PSASSPATFKTVALFGKKPAAPSKPKP+  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic3.9e-14390.38Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF G S RSAPSASS  T KTVALFGKKPAA +KP  +AVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic9.3e-14591.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSP T K VALFGKKPA   KPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic2.4e-14591.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AE           
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE-----------

Query:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
             NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  -----NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic1.4e-5249.22Show/hide
Query:  SGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE
        S   AR+APS SS A F    +  +K AA  KP  S+ SP       WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E
Subjt:  SGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE

Query:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA---------ENFE----------DKLHPGGPFDPL
        +IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A         E +           D L+PGG FDPL
Subjt:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA---------ENFE----------DKLHPGGPFDPL

Query:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        GLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic9.8e-5146.56Show/hide
Query:  SGASARSAPSASSPATFKTVALFG------KKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS
        S   A S+ + +  A     +LFG      +K AA +KP  S+ SP       WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+
Subjt:  SGASARSAPSASSPATFKTVALFG------KKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS

Query:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA---------ENFE----------DKLHPG
        K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A         E +           D L+PG
Subjt:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA---------ENFE----------DKLHPG

Query:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        G FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.3e-5245.38Show/hide
Query:  VALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEA
        +A  G K     + +   ++ V     ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE 
Subjt:  VALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEA

Query:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGN-----------NIPINLIVAVIAENFE------------DKLHPGGPFDPLGLADDPDQAAILKVKEI
         +++      E VWFK GA +     LNY GN            + + +++  +AE +             D L+PGGPFDPLGLADDPD  A LKVKEI
Subjt:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGN-----------NIPINLIVAVIAENFE------------DKLHPGGPFDPLGLADDPDQAAILKVKEI

Query:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN
        KNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Subjt:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN

P27518 Chlorophyll a-b binding protein 151, chloroplastic1.7e-5051.2Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L        +IP YL GE PGDYG+D  GLS  PE F+K +  E+IH RWAMLGA G + PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAVIA---------ENFE----------DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A         E +           D ++PGG FDPLGLADDPD  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAVIA---------ENFE----------DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFGNN
        HL+DP  NN
Subjt:  HLSDPFGNN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic4.2e-12680.07Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF KK  AP+K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE----------------NFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AE                +FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE----------------NFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 33.2e-4943.33Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A                      
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 23.2e-4943.33Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A                      
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 11.9e-4943.33Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + + +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A                      
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B17.2e-4942.22Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  + +G + + +P+AS    F T  +  +K + P+ P  S           WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A                      
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIAENF-------------------

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 53.0e-12780.07Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF KK  AP+K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE----------------NFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AE                +FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAE----------------NFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGCGTCTCTGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCTCAGCTAGGTCAGCTCCCTCTGCTTC
TAGCCCCGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCCGCACCATCCAAGCCAAAGCCCTCCGCCGTCTCTCCGGTCAATGACGAGCTCGCCAAGTGGT
ATGGTCCGGACAGAAGGATTTTCTTGCCAGACGGCCTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTGCCCGGCGACTATGGTTACGATCCCTTTGGA
CTCAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAAGCCTTTAACAA
ATTTGGTGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAATATTCCCATCAACCTCATTG
TCGCCGTCATTGCCGAGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAGGCAGCGATCTTGAAGGTGAAGGAG
ATAAAGAATGGGAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGACCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTT
TGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGCGTCTCTGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCTCAGCTAGGTCAGCTCCCTCTGCTTC
TAGCCCCGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCCGCACCATCCAAGCCAAAGCCCTCCGCCGTCTCTCCGGTCAATGACGAGCTCGCCAAGTGGT
ATGGTCCGGACAGAAGGATTTTCTTGCCAGACGGCCTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTGCCCGGCGACTATGGTTACGATCCCTTTGGA
CTCAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAAGCCTTTAACAA
ATTTGGTGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAATATTCCCATCAACCTCATTG
TCGCCGTCATTGCCGAGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAGGCAGCGATCTTGAAGGTGAAGGAG
ATAAAGAATGGGAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGACCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTT
TGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAENFEDKLHPGGPFDPLGLADDPDQAAILKVKE
IKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL