; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G001970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10
Genome locationchr08:4223333..4226132
RNA-Seq ExpressionLsi08G001970
SyntenyLsi08G001970
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR007502 - Helicase-associated domain
IPR011709 - Domain of unknown function DUF1605
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024852.1 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6865.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

XP_022151017.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Momordica charantia]6.2e-6963.39Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNP+GHQMA LPLDP+YSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSSPEGDHLTLINVYRSA+EFL+KK L  SK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S R+WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE +Q
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAPDC
        TNHKYIRN+++ID+LWL E AP C
Subjt:  TNHKYIRNISQIDQLWLPEWAPDC

XP_022932160.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita moschata]1.4e-6865.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

XP_022985184.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita maxima]1.4e-6865.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

XP_023520426.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita pepo subsp. pepo]1.4e-6865.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

TrEMBL top hitse value%identityAlignment
A0A1S3CJ82 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH101.1e-6864Show/hide
Query:  NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKK
        N  KLS+PVGHQMA +PLDPIYSKALIVASQSNC+EEMLITVSMLSVESIFY+PREK EEARAK+K FSSPEGDHLTLINVYRSA +FLNKKKLEL+K K
Subjt:  NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKK

Query:  VEKSFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNE
        +EKS R+WCKE+FIN R +R+A D+                                             YR   SGE VQIHPSSVLF KKPDCVIFNE
Subjt:  VEKSFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNE

Query:  LVQTNHKYIRNISQIDQLWLPEWAP
         VQTN+KYIRNI++ID+LWL E AP
Subjt:  LVQTNHKYIRNISQIDQLWLPEWAP

A0A5C7HIF7 Uncharacterized protein1.1e-6356.15Show/hide
Query:  SSREMVTALEHGELFG---NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINV
        S   ++ +LE   L G   +  KLS+PVGHQM+ LPLDPIYSKALIVASQ NC+EEMLITV+MLSVESIFY PREKLEEAR  +K F+SPEGDHLTLINV
Subjt:  SSREMVTALEHGELFG---NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINV

Query:  YRSADEFLNKKKLELSKKKVEKSFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQ
        YR++DEFL K+K+E++K+K EK  R+WCKE+FIN R +R A DV                                             YR   SG+ VQ
Subjt:  YRSADEFLNKKKLELSKKKVEKSFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQ

Query:  IHPSSVLFGKKPDCVIFNELVQTNHKYIRNISQIDQLWLPEWAP
        IHPSSVLF  KP+C+IFNELVQTN+KYIRNI++ID LWL E AP
Subjt:  IHPSSVLFGKKPDCVIFNELVQTNHKYIRNISQIDQLWLPEWAP

A0A6J1DA28 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH103.0e-6963.39Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNP+GHQMA LPLDP+YSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSSPEGDHLTLINVYRSA+EFL+KK L  SK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S R+WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE +Q
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAPDC
        TNHKYIRN+++ID+LWL E AP C
Subjt:  TNHKYIRNISQIDQLWLPEWAPDC

A0A6J1EVL1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH106.7e-6965.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

A0A6J1JAN7 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH106.7e-6965.32Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KLSNPVGH MA +PLDPIYSKALIVA Q NC+EEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+EFLNKKKLELSK+KVEK
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
        S ++WCKE+FIN R +R+A DV                                             YR   SGE VQIHPSSVLF KKPDCVIFNE VQ
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        TNHKYIRNI++ID+LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

SwissProt top hitse value%identityAlignment
F4IE66 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH101.0e-5348.65Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KL NPVG+QM+ LPL+P+YSKALI+A+Q NC+EEMLITV++LSVESIFY+PREK EEAR    +F+S EGDHLT ++VYR +DEFL K+K   S   ++K
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
          ++WCKE+++N R +++A D+                                             YR   SGE V IHP+SVLF  KP+CVIFNEL+Q
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        T+ KYI+N++ ID LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

Q09530 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-53.0e-2633.48Show/hide
Query:  LSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKS
        L   +G +MA  PL+P  SK LI++    C EE+L  V+ML+V++IFY P+EK + A  K   F  PEGDHLTL+ VY S               K    
Subjt:  LSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKS

Query:  FRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQT
         + WC E+FI  R M+ A D+                                             YR    G+ V IHPSS  F ++P+ V+++ELV T
Subjt:  FRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQT

Query:  NHKYIRNISQIDQLWLPEWAP
          +Y+R ++ ID  WL E+AP
Subjt:  NHKYIRNISQIDQLWLPEWAP

Q54F05 ATP-dependent RNA helicase dhx82.1e-2735.48Show/hide
Query:  VGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKSFRRW
        +G +MA  PLDP  SK LI +    C +E+L  V+MLSV+++FY P+EK   A  K   F  PEGDHLTL+NVY S               K  K    W
Subjt:  VGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKSFRRW

Query:  CKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQTNHKY
        C E+F+  R +R A DV                                             Y+    G+ V IHPSS LF + PD VI++ELV T  +Y
Subjt:  CKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQTNHKY

Query:  IRNISQIDQLWLPEWAP
        +R +  ID  WL E AP
Subjt:  IRNISQIDQLWLPEWAP

Q80VY9 ATP-dependent RNA helicase DHX332.1e-2734.36Show/hide
Query:  EMVTALEHGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRS---
        +++ ALEH +   + + L+ P+G +MA  PL+P ++K ++++S+ +C EE+L  VS+LSV+S+ YNP  + +E ++  K F S EGDH+TL+N+YR+   
Subjt:  EMVTALEHGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRS---

Query:  --------ADEFLNKKKLEL--------------------SKKKVEKSFRRWCKEH--FINCRFMRYAPDVYRVHGSGETVQIHPSSVLFGKKPDCVIFN
                 + F+N K + L                    S +   +S RR C  H  F+N   ++     Y    + + V IHPSSVLF  KP CV++ 
Subjt:  --------ADEFLNKKKLEL--------------------SKKKVEKSFRRWCKEH--FINCRFMRYAPDVYRVHGSGETVQIHPSSVLFGKKPDCVIFN

Query:  ELVQTNHKYIRNISQIDQLWLPEWAPD
         L+ TN  Y+R++  +D  WL E APD
Subjt:  ELVQTNHKYIRNISQIDQLWLPEWAPD

Q9H6R0 ATP-dependent RNA helicase DHX331.2e-2734.51Show/hide
Query:  EMVTALEHGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRS---
        +++ ALEH +   + + L+ P+G +MA  PL+P ++K ++++ + +C EE+L  VS+LSV+S+ +NP  + EE +   K F S EGDH+TL+N+YR+   
Subjt:  EMVTALEHGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRS---

Query:  --------ADEFLNKKKLEL--------------------SKKKVEKSFRRWCKEHFINCRFMRYAPD-VYRVHGSGETVQIHPSSVLFGKKPDCVIFNE
                 + F+N K + L                    S +   +S RR C  H +        PD  Y    + + V IHPSSVLF  KP CV++ E
Subjt:  --------ADEFLNKKKLEL--------------------SKKKVEKSFRRWCKEHFINCRFMRYAPD-VYRVHGSGETVQIHPSSVLFGKKPDCVIFNE

Query:  LVQTNHKYIRNISQIDQLWLPEWAPD
        L+ TN  Y+R++  ID  WL E AP+
Subjt:  LVQTNHKYIRNISQIDQLWLPEWAPD

Arabidopsis top hitse value%identityAlignment
AT1G26370.1 RNA helicase family protein7.1e-5548.65Show/hide
Query:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK
        KL NPVG+QM+ LPL+P+YSKALI+A+Q NC+EEMLITV++LSVESIFY+PREK EEAR    +F+S EGDHLT ++VYR +DEFL K+K   S   ++K
Subjt:  KLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEK

Query:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ
          ++WCKE+++N R +++A D+                                             YR   SGE V IHP+SVLF  KP+CVIFNEL+Q
Subjt:  SFRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQ

Query:  TNHKYIRNISQIDQLWLPEWAP
        T+ KYI+N++ ID LWL E AP
Subjt:  TNHKYIRNISQIDQLWLPEWAP

AT1G32490.1 RNA helicase family protein4.1e-1827.98Show/hide
Query:  GHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSV-ESIFYNPREKLEEA-RAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKSFRR
        G +MA  PLDP+ SK ++V+ +  C +E++   +MLS+  SIFY P++K   A  A++ + +   GDH+ L+ VY              S  K      +
Subjt:  GHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSV-ESIFYNPREKLEEA-RAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKSFRR

Query:  WCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQTNHK
        WC E++I  R M+ A D+                                             YR     +TV IHP+S L    P  V+++ELV T+ +
Subjt:  WCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQTNHK

Query:  YIRNISQIDQLWLPEWAP
        Y+R ++++   WL E AP
Subjt:  YIRNISQIDQLWLPEWAP

AT3G26560.1 ATP-dependent RNA helicase, putative1.0e-2432.13Show/hide
Query:  LSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKS
        L   +G +MA  PL+P  SK L+ +    C +E+L  ++M+   +IFY PREK  +A  K   F  PEGDHLTL+ VY +               K +  
Subjt:  LSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKS

Query:  FRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQT
           WC E+FI  R +R A DV                                             YR     + V IHPSS LF ++PD VI+++LV T
Subjt:  FRRWCKEHFINCRFMRYAPDV---------------------------------------------YRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQT

Query:  NHKYIRNISQIDQLWLPEWAP
          +Y+R ++ ID  WL E AP
Subjt:  NHKYIRNISQIDQLWLPEWAP

AT4G18465.1 RNA helicase family protein2.9e-2432.91Show/hide
Query:  PRNKSSREMVTALE---HGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPR-EKLEEARAKVKYFSSPEGDHL
        P   SS  M+ ALE     ++  +  KL++P G Q+A LPLDP+ SK ++ +S+  C  E++   ++LSV+S++   R  + E+  AK++ F++ EGDH+
Subjt:  PRNKSSREMVTALE---HGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPR-EKLEEARAKVKYFSSPEGDHL

Query:  TLINVYRSADE-----------FLN----KKKLEL--SKKKVEKSFRRWCKE---------------HFIN-CRFMRYAPDVYRVHGSGETVQIHPSSVL
        T +NVY+   E           FLN    KK +E+    K++ +      K                 F N CR   ++  VY+     E V IHPSSVL
Subjt:  TLINVYRSADE-----------FLN----KKKLEL--SKKKVEKSFRRWCKE---------------HFIN-CRFMRYAPDVYRVHGSGETVQIHPSSVL

Query:  FGKKPDCVIFNELVQTNHKYIRNISQIDQLWLPEWAP
        F   P  V++  +V T  +Y+RN+  I+  WL E AP
Subjt:  FGKKPDCVIFNELVQTNHKYIRNISQIDQLWLPEWAP

AT5G13010.1 RNA helicase family protein2.3e-2128.95Show/hide
Query:  NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKK
        N++     +G +M   PLDP  +K L++  + +C++E+L  VSMLSV S+F+ P+E+ EE+ A  + F  PE DHLTL+NVY               ++ 
Subjt:  NSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELSKKK

Query:  VEKSFR-RWCKEHFINCRFMRYAPDV-------------------------------------YRVHGSGETV--------QIHPSSVLF--GKKPDCVI
         E  +R  WC +H++  + +R A +V                                      R+ G GE V         +HPSS L+  G  PD V+
Subjt:  VEKSFR-RWCKEHFINCRFMRYAPDV-------------------------------------YRVHGSGETV--------QIHPSSVLF--GKKPDCVI

Query:  FNELVQTNHKYIRNISQIDQLWLPEWAP
        ++EL+ T  +Y++  + ++  WL E  P
Subjt:  FNELVQTNHKYIRNISQIDQLWLPEWAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGTGAAAAACAATCAGCAGGTAGAGAACTAAAGCACTTCAGAGGTGATGGTGAAAATCCCAGGAACAAGAGTTCAAGGGAAATGGTGACTGCACTTGAACATGG
AGAGCTTTTTGGGAATTCCATTAAACTATCTAATCCAGTAGGACATCAAATGGCTCATCTTCCATTAGATCCAATATATTCTAAAGCTTTGATTGTTGCCAGTCAGTCCA
ATTGCATGGAAGAAATGTTGATAACTGTGTCAATGCTCTCTGTGGAATCCATTTTTTACAACCCTCGAGAGAAGTTAGAAGAGGCAAGAGCTAAAGTGAAATATTTTTCA
AGTCCTGAAGGAGATCACCTCACTCTTATCAATGTGTATCGGTCTGCAGATGAATTTTTGAATAAGAAAAAGTTAGAACTTAGCAAAAAGAAAGTTGAGAAAAGCTTTAG
AAGGTGGTGCAAGGAACATTTTATAAATTGTCGGTTTATGAGATATGCACCTGACGTTTACAGGGTTCATGGAAGTGGTGAGACAGTACAGATTCATCCTTCTTCTGTGT
TATTTGGGAAAAAACCAGATTGTGTAATTTTCAACGAGTTGGTGCAAACTAATCATAAGTACATCCGCAACATCTCTCAAATCGATCAACTTTGGCTGCCTGAATGGGCT
CCTGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGTGAAAAACAATCAGCAGGTAGAGAACTAAAGCACTTCAGAGGTGATGGTGAAAATCCCAGGAACAAGAGTTCAAGGGAAATGGTGACTGCACTTGAACATGG
AGAGCTTTTTGGGAATTCCATTAAACTATCTAATCCAGTAGGACATCAAATGGCTCATCTTCCATTAGATCCAATATATTCTAAAGCTTTGATTGTTGCCAGTCAGTCCA
ATTGCATGGAAGAAATGTTGATAACTGTGTCAATGCTCTCTGTGGAATCCATTTTTTACAACCCTCGAGAGAAGTTAGAAGAGGCAAGAGCTAAAGTGAAATATTTTTCA
AGTCCTGAAGGAGATCACCTCACTCTTATCAATGTGTATCGGTCTGCAGATGAATTTTTGAATAAGAAAAAGTTAGAACTTAGCAAAAAGAAAGTTGAGAAAAGCTTTAG
AAGGTGGTGCAAGGAACATTTTATAAATTGTCGGTTTATGAGATATGCACCTGACGTTTACAGGGTTCATGGAAGTGGTGAGACAGTACAGATTCATCCTTCTTCTGTGT
TATTTGGGAAAAAACCAGATTGTGTAATTTTCAACGAGTTGGTGCAAACTAATCATAAGTACATCCGCAACATCTCTCAAATCGATCAACTTTGGCTGCCTGAATGGGCT
CCTGATTGTTAAATCGGATGTAGTTCTATTTGAGCAGGAACTTCCTCCAAGATCTGGCAGTGAGTGGCAGTTTAAAATGTTGAAGCTGAGTACAAATTTCAAAGCATTAG
CTGTTGGAATGACTATACTATGA
Protein sequenceShow/hide protein sequence
MYGEKQSAGRELKHFRGDGENPRNKSSREMVTALEHGELFGNSIKLSNPVGHQMAHLPLDPIYSKALIVASQSNCMEEMLITVSMLSVESIFYNPREKLEEARAKVKYFS
SPEGDHLTLINVYRSADEFLNKKKLELSKKKVEKSFRRWCKEHFINCRFMRYAPDVYRVHGSGETVQIHPSSVLFGKKPDCVIFNELVQTNHKYIRNISQIDQLWLPEWA
PDC