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Lsi08G001990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G001990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThioredoxin-dependent peroxiredoxin
Genome locationchr08:4247435..4249063
RNA-Seq ExpressionLsi08G001990
SyntenyLsi08G001990
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0045454 - cell redox homeostasis (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0008379 - thioredoxin peroxidase activity (molecular function)
InterPro domainsIPR000866 - Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138385.1 peroxiredoxin Q, chloroplastic [Cucumis sativus]5.4e-6189.51Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HPK SL   LPSLTPKTPSS KLPFLSRSS S FHGAQISHHI PSSLP SSSSSFKFTIS+KVNKGQ PP FTLKDQ+GRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

XP_008463093.1 PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis melo]1.3e-6291.61Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASLVHP  SL F LPSLTPKTPSS KLPFLSRSSASQFHGAQISHHI P SLP SSSSS KFTISSKVNKGQTPP FTLKDQDGRNVSLSKFKG+PVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

XP_022932804.1 peroxiredoxin Q, chloroplastic-like [Cucurbita moschata]7.8e-6088.11Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HP  SLP  LPSL+PKTPSS KLPF SRSS SQF GAQISHHISPSS+P  SSSSFKFT+SSKV+KGQ PPAF LKDQDGRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

XP_023513647.1 peroxiredoxin Q, chloroplastic-like [Cucurbita pepo subsp. pepo]1.7e-5987.41Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HP  SLP  LPSL+PKTPS+ KLPF SRSS SQF GAQISHHISPSS+P  SSSSFKFT+SSKV+KGQ PPAF LKDQDGRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

XP_038884257.1 peroxiredoxin Q, chloroplastic [Benincasa hispida]1.4e-6192.36Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTP-SSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVV
        MASLVHPKASLPF LPS TPKTP SS KLPFLSRSS SQFHG QIS HISP SLP  SSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVV
Subjt:  MASLVHPKASLPFPLPSLTPKTP-SSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVV

Query:  VYFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        VYFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  VYFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

TrEMBL top hitse value%identityAlignment
A0A0A0KBU9 Thioredoxin-dependent peroxiredoxin2.6e-6189.51Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HPK SL   LPSLTPKTPSS KLPFLSRSS S FHGAQISHHI PSSLP SSSSSFKFTIS+KVNKGQ PP FTLKDQ+GRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

A0A1S3CK00 Thioredoxin-dependent peroxiredoxin6.2e-6391.61Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASLVHP  SL F LPSLTPKTPSS KLPFLSRSSASQFHGAQISHHI P SLP SSSSS KFTISSKVNKGQTPP FTLKDQDGRNVSLSKFKG+PVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

A0A5D3BTR7 Thioredoxin-dependent peroxiredoxin6.2e-6391.61Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASLVHP  SL F LPSLTPKTPSS KLPFLSRSSASQFHGAQISHHI P SLP SSSSS KFTISSKVNKGQTPP FTLKDQDGRNVSLSKFKG+PVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

A0A6J1EY18 Thioredoxin-dependent peroxiredoxin3.8e-6088.11Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HP  SLP  LPSL+PKTPSS KLPF SRSS SQF GAQISHHISPSS+P  SSSSFKFT+SSKV+KGQ PPAF LKDQDGRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

A0A6J1IGC9 Thioredoxin-dependent peroxiredoxin1.2e-5888.11Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MASL HP  SLP  L SL+PKTPSS KLPF SRSS SQF GAQISHHISPSS+P  SSSSFKFT+SSKVNKGQ PPAF LKDQDGRNVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

SwissProt top hitse value%identityAlignment
Q6QPJ6 Peroxiredoxin Q, chloroplastic8.4e-4973.43Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MAS+  PK SLP  LP+L P T SS  LP LS+SS SQF+G + SH    +SL   SSSS K TI +KVNKGQ PP+FTLKDQDG+ +SLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+VVGISGDD SSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

Q6UBI3 Peroxiredoxin Q, chloroplastic9.6e-4568.53Show/hide
Query:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV
        MA+L  P  S  F LPS TPK  SS  L  +S+S+ SQF G ++SH  S S  P     S+K +I +KV++G  PPAFTLKDQDG+NVSLSKFKGKPVVV
Subjt:  MASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVV

Query:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        YFYPADETPGCTKQACAFRDSYEKFKKAGA+V+GISGDDSSSH
Subjt:  YFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

Q75SY5 Peroxiredoxin Q, chloroplastic7.9e-3962.76Show/hide
Query:  MASLVHPKASLPFP--LPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPV
        MA++  P A   FP  L + TPK   S  L  +  SS SQ  G +     SPSSLP   S S + ++ +KV+KG  PP FTLKDQDG+NVSL++FKGKPV
Subjt:  MASLVHPKASLPFP--LPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPV

Query:  VVYFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH
        VVYFYPADETPGCTKQACAFRDSYEKFKKAGA+V+GISGDD SSH
Subjt:  VVYFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH

Q9LU86 Peroxiredoxin Q, chloroplastic3.6e-3665.32Show/hide
Query:  TPSSYKLPFLSRSSASQFHGAQISH--HISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFR
        T + + +P  ++SS S F G+ ++H  +ISP      SSSS K  I +KVNKGQ  P FTLKDQ+G+ VSL K+KGKPVV+YFYPADETPGCTKQACAFR
Subjt:  TPSSYKLPFLSRSSASQFHGAQISH--HISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFR

Query:  DSYEKFKKAGAQVVGISGDDSSSH
        DSYEKFKKAGA+V+GISGDDS+SH
Subjt:  DSYEKFKKAGAQVVGISGDDSSSH

Q9MB35 Peroxiredoxin Q, chloroplastic (Fragment)3.9e-3874.34Show/hide
Query:  LSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA
        L  SS SQFHG + SH    SS  S S+   K +I +KV KG TPP FTLKDQ+GR VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA
Subjt:  LSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA

Query:  QVVGISGDDSSSH
        +VVGISGD S SH
Subjt:  QVVGISGDDSSSH

Arabidopsis top hitse value%identityAlignment
AT3G26060.1 Thioredoxin superfamily protein2.6e-3765.32Show/hide
Query:  TPSSYKLPFLSRSSASQFHGAQISH--HISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFR
        T + + +P  ++SS S F G+ ++H  +ISP      SSSS K  I +KVNKGQ  P FTLKDQ+G+ VSL K+KGKPVV+YFYPADETPGCTKQACAFR
Subjt:  TPSSYKLPFLSRSSASQFHGAQISH--HISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFR

Query:  DSYEKFKKAGAQVVGISGDDSSSH
        DSYEKFKKAGA+V+GISGDDS+SH
Subjt:  DSYEKFKKAGAQVVGISGDDSSSH

AT3G26060.2 Thioredoxin superfamily protein1.4e-3563.11Show/hide
Query:  TPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS
        T + + +P  ++SS S F G+ ++H  S    P SSSS      + +VNKGQ  P FTLKDQ+G+ VSL K+KGKPVV+YFYPADETPGCTKQACAFRDS
Subjt:  TPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSFKFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS

Query:  YEKFKKAGAQVVGISGDDSSSH
        YEKFKKAGA+V+GISGDDS+SH
Subjt:  YEKFKKAGAQVVGISGDDSSSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTTCACATTATTTTAAAATTAAATAAAATTAATCCCTTCGTCGTGTCTACGCGTCTACCATATCTAAGCAAGATAAGAAAGAAGAGAAAGAAGGATTTTGAGAGCAC
ATTTTCTCAAAAACCCTCAAAATTTAACCCTCCAAAAATGGCTTCTCTCGTCCATCCAAAGGCCTCTCTCCCTTTTCCTCTCCCATCTCTAACTCCTAAAACCCCATCTT
CTTACAAACTTCCATTTCTTTCCAGATCCTCTGCTTCTCAGTTTCATGGAGCCCAAATTTCTCACCACATTTCCCCTTCCTCTCTTCCTTCTTCTTCTTCTTCTTCCTTC
AAATTTACCATCTCTTCTAAGGTGAATAAGGGCCAAACCCCACCTGCTTTCACCTTGAAAGATCAGGATGGAAGGAATGTGAGCCTATCTAAATTTAAAGGGAAACCTGT
GGTTGTCTATTTCTATCCTGCTGATGAAACTCCTGGTTGTACCAAACAGGCCTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTCAGGTTGTGGGCA
TAAGTGGGGATGATTCATCATCACAC
mRNA sequenceShow/hide mRNA sequence
TATTTTCACATTATTTTAAAATTAAATAAAATTAATCCCTTCGTCGTGTCTACGCGTCTACCATATCTAAGCAAGATAAGAAAGAAGAGAAAGAAGGATTTTGAGAGCAC
ATTTTCTCAAAAACCCTCAAAATTTAACCCTCCAAAAATGGCTTCTCTCGTCCATCCAAAGGCCTCTCTCCCTTTTCCTCTCCCATCTCTAACTCCTAAAACCCCATCTT
CTTACAAACTTCCATTTCTTTCCAGATCCTCTGCTTCTCAGTTTCATGGAGCCCAAATTTCTCACCACATTTCCCCTTCCTCTCTTCCTTCTTCTTCTTCTTCTTCCTTC
AAATTTACCATCTCTTCTAAGGTGAATAAGGGCCAAACCCCACCTGCTTTCACCTTGAAAGATCAGGATGGAAGGAATGTGAGCCTATCTAAATTTAAAGGGAAACCTGT
GGTTGTCTATTTCTATCCTGCTGATGAAACTCCTGGTTGTACCAAACAGGCCTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTCAGGTTGTGGGCA
TAAGTGGGGATGATTCATCATCACAC
Protein sequenceShow/hide protein sequence
YFHIILKLNKINPFVVSTRLPYLSKIRKKRKKDFESTFSQKPSKFNPPKMASLVHPKASLPFPLPSLTPKTPSSYKLPFLSRSSASQFHGAQISHHISPSSLPSSSSSSF
KFTISSKVNKGQTPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAQVVGISGDDSSSH