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Lsi08G002070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBapA prefix-like domain-containing protein
Genome locationchr08:4547982..4575289
RNA-Seq ExpressionLsi08G002070
SyntenyLsi08G002070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBO9645734.1 hypothetical protein [Pseudacidovorax sp.]1.7e-0551.22Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        LTGG L +GG L  G+ G +G+LG LTGG L +GG L  G+ G +G+LG LT G L +GG L  G+ G  G+LG L GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

SDY71664.1 hypothetical protein SAMN05518669_11544 [Variovorax sp. YR634]3.0e-0543.9Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        L GG+LG  G L  G+ G++G+LG + GG+ G  G L  GI G++G+LG +  G+ G  G L  GI G+ G+LG + GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

SEU06897.1 hypothetical protein SAMN05443580_113144 [Variovorax sp. OV084]3.0e-0543.9Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        L GG+LG  G L  G+ G++G+LG + GG+ G  G L  GI G++G+LG +  G+ G  G L  GI G+ G+LG + GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

WP_093057540.1 hypothetical protein [Variovorax sp. YR634]3.0e-0543.9Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        L GG+LG  G L  G+ G++G+LG + GG+ G  G L  GI G++G+LG +  G+ G  G L  GI G+ G+LG + GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

WP_097200690.1 hypothetical protein [Variovorax sp. YR752]3.0e-0543.9Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        L GG+LG  G L  G+ G++G+LG + GG+ G  G L  GI G++G+LG +  G+ G  G L  GI G+ G+LG + GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

TrEMBL top hitse value%identityAlignment
A0A286AQL9 Uncharacterized protein1.4e-0543.9Show/hide
Query:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG
        L GG+LG  G L  G+ G++G+LG + GG+ G  G L  GI G++G+LG +  G+ G  G L  GI G+ G+LG + GG+ G
Subjt:  LTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGILG

A0A2W7GYA3 Uncharacterized protein2.2e-0647.06Show/hide
Query:  LTGGILGMG-GKLADGIEGNEGMLGILTGGILGMG-GTLADGIEGNEGMLGILTSGILGMG-GKLADGIAGNGGILGILRGGILG
        L GG+ G G G L DG+ GN+G++G L GG+ G G G L +G+ G++G++G L  G+ G G G L DG+ GN G++G L GG+ G
Subjt:  LTGGILGMG-GKLADGIEGNEGMLGILTGGILGMG-GTLADGIEGNEGMLGILTSGILGMG-GKLADGIAGNGGILGILRGGILG

A0A370FPG4 Uncharacterized protein (Fragment)1.9e-0548.81Show/hide
Query:  LTGGILG---MGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGIL
        + GG+LG   +GG L  G+ G +G+LG LTGG L +GG L  G+ G +G+LG LT G L +GG L  G+ G  G+LG L GG L
Subjt:  LTGGILG---MGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILGMGGKLADGIAGNGGILGILRGGIL

A0A3P3E592 Uncharacterized protein2.4e-0541.23Show/hide
Query:  GILEKANKLDWWNYKERMDNSILTGGILG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGTLADGIEGNEGMLGILTSG-ILG---MGGKLADGIA
        G L   + LD    ++ +  ++L G +LG   +GG L DG+ G +G+LG L GG +LG   +GG L DG+ G +G++G L  G +LG   +GG L DG+ 
Subjt:  GILEKANKLDWWNYKERMDNSILTGGILG---MGGKLADGIEGNEGMLGILTGG-ILG---MGGTLADGIEGNEGMLGILTSG-ILG---MGGKLADGIA

Query:  GNGGILGILRGGIL
        G  G+LG L GG L
Subjt:  GNGGILGILRGGIL

A0A3S0HAP9 Uncharacterized protein1.9e-0545.88Show/hide
Query:  LTGGILGMG-GKLADGIEGNEGMLGILTGGILGMG-GTLADGIEGNEGMLGILTSGILGMG-GKLADGIAGNGGILGILRGGILG
        L GG+ G G G L DG+ G++G++G L GG+ G G G L DG+ G++G++G L  G+ G G G L DG+ G+ G++G L GG+ G
Subjt:  LTGGILGMG-GKLADGIEGNEGMLGILTGGILGMG-GTLADGIEGNEGMLGILTSGILGMG-GKLADGIAGNGGILGILRGGILG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAGCTCCACTACTTTCATAACATACAAGTACTATGGGAGAGGAGGAATAATGACCAATGGAAATACTAGGAATATTACGAACGATGGAATACTAGAGAAGGC
AAATAAGTTGGATTGGTGGAATTATAAGGAGAGAATGGATAATAGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAG
GAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCACACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGAGTGGGATATTAGGG
ATGGGAGGCAAACTAGCAGATGGAATAGCAGGCAATGGAGGAATATTAGGGATATTAAGAGGTGGGATATTAGGGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAAGCTCCACTACTTTCATAACATACAAGTACTATGGGAGAGGAGGAATAATGACCAATGGAAATACTAGGAATATTACGAACGATGGAATACTAGAGAAGGC
AAATAAGTTGGATTGGTGGAATTATAAGGAGAGAATGGATAATAGCATACTAACGGGTGGGATATTAGGGATGGGAGGCAAACTAGCGGATGGAATAGAAGGCAATGAAG
GAATGTTAGGCATACTAACGGGTGGGATATTAGGGATGGGAGGCACACTAGCGGATGGAATAGAAGGCAATGAAGGAATGTTAGGCATACTAACGAGTGGGATATTAGGG
ATGGGAGGCAAACTAGCAGATGGAATAGCAGGCAATGGAGGAATATTAGGGATATTAAGAGGTGGGATATTAGGGATGTGA
Protein sequenceShow/hide protein sequence
MKRSSTTFITYKYYGRGGIMTNGNTRNITNDGILEKANKLDWWNYKERMDNSILTGGILGMGGKLADGIEGNEGMLGILTGGILGMGGTLADGIEGNEGMLGILTSGILG
MGGKLADGIAGNGGILGILRGGILGM