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Lsi08G002140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:4837678..4841318
RNA-Seq ExpressionLsi08G002140
SyntenyLsi08G002140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]4.0e-3485.06Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        MGGNNRQ K+HSSFSIFS FKSRR RKGD+C+H  S  DEMPR  KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3380.22Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVP
        MGGNNR  K HSSFSIF+ FKS++SRK DHCDH S W DEMPR  KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQT  +P
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVP

KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]7.5e-3379.12Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVP
        MGGNNR  K HSSFSIF+ FKSRRSRK DHCDH   W DE+PR +K+WPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQT  +P
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVP

KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]1.8e-3485.06Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        MGGNNRQ K H+SFSIFS FKSRR RKGDHC+H  S  DEMPR  KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]1.1e-3484.71Show/hide
Query:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        G NRQ K+HSSFSIFS FKS+R RKGDH DH  +WPDEMPR NKVWPSDEDK HHW+AEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein5.1e-3584.71Show/hide
Query:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        G NRQ K+HSSFSIFS FKS+R RKGDH DH  +WPDEMPR NKVWPSDEDK HHW+AEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

A0A0A0K8V3 Uncharacterized protein1.1e-2971.74Show/hide
Query:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVPRKI
        G ++  K+HSSFS FS  KS+ SRKGDH DH  SW DE  R  KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT  +P  +
Subjt:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVPRKI

A0A0A0KAK6 Uncharacterized protein8.7e-3585.06Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        MGGNNRQ K H+SFSIFS FKSRR RKGDHC+H  S  DEMPR  KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

A0A0A0KBW1 Uncharacterized protein2.5e-3485.88Show/hide
Query:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        G NRQ K+HSSFSIFS FKSRR RKGDH DH  +W DEMPR NKVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  GNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

A0A5A7SWT9 Uncharacterized protein1.9e-3485.06Show/hide
Query:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        MGGNNRQ K+HSSFSIFS FKSRR RKGD+C+H  S  DEMPR  KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
Subjt:  MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein2.4e-1352.81Show/hide
Query:  MGGNNRQNKTHSS--FSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        MGG NR   +HSS  FS+FS FK+RRS +    + D SW D+     K   SDEDK  +WVAEPGIDRKA  +I + +  RV ESERQT
Subjt:  MGGNNRQNKTHSS--FSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT

AT5G26620.1 unknown protein2.1e-0950.77Show/hide
Query:  SRKGDH--CDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT
        +R+  H   + D+SW D++    K W SDEDK  +WVAEPGIDRKA  +I + + +RV ESERQT
Subjt:  SRKGDH--CDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAATAACAGGCAAAATAAAACTCACTCATCTTTTTCAATCTTCAGCATTTTCAAATCCAGAAGGAGTCGAAAAGGAGACCACTGCGACCATGATAGCTCTTG
GCCAGACGAGATGCCGAGATTGAACAAGGTGTGGCCGAGTGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGACA
GGATCTATCGAAACCGTGTTTTTGAATCCGAGCGCCAAACTGAGAAAGTTCCAAGGAAGATCGCAAAGGAGAAAGAAATTGTTAGTACACCAATAACACATGAGGCAAAG
GAGAAGGAAGCTATTAGTGTACCGCCAATAGCTCATGAGGCAAAGGAGAAGGAAACTATTAGTATGCCGCCAATAGCTCATGGGGCAAATGAGAAGGAAGCTATTAGTGT
ACCACCAACAGCACATGAGGAAAAAGTTTCAAGGAATATGACAAATGTGATGGAAGTCATTATTGATATACCACCAATATCACATGAGGCAAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCAATAACAGGCAAAATAAAACTCACTCATCTTTTTCAATCTTCAGCATTTTCAAATCCAGAAGGAGTCGAAAAGGAGACCACTGCGACCATGATAGCTCTTG
GCCAGACGAGATGCCGAGATTGAACAAGGTGTGGCCGAGTGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGACA
GGATCTATCGAAACCGTGTTTTTGAATCCGAGCGCCAAACTGAGAAAGTTCCAAGGAAGATCGCAAAGGAGAAAGAAATTGTTAGTACACCAATAACACATGAGGCAAAG
GAGAAGGAAGCTATTAGTGTACCGCCAATAGCTCATGAGGCAAAGGAGAAGGAAACTATTAGTATGCCGCCAATAGCTCATGGGGCAAATGAGAAGGAAGCTATTAGTGT
ACCACCAACAGCACATGAGGAAAAAGTTTCAAGGAATATGACAAATGTGATGGAAGTCATTATTGATATACCACCAATATCACATGAGGCAAAGAAG
Protein sequenceShow/hide protein sequence
MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTEKVPRKIAKEKEIVSTPITHEAK
EKEAISVPPIAHEAKEKETISMPPIAHGANEKEAISVPPTAHEEKVSRNMTNVMEVIIDIPPISHEAKK