CuGenDBv2

Gene ID	Lsi08G002280
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	rRNA intron-encoded homing endonuclease, putative
Genome location	chr08:5128381..5128901
RNA-Seq Expression	Lsi08G002280
Synteny	Lsi08G002280
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652002.1 hypothetical protein Csa_021689 [Cucumis sativus]

2.7e-52

100

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1854967.1 hypothetical protein Lal_00048035 [Lupinus albus]

4.7e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1856092.1 hypothetical protein Lal_00045206 [Lupinus albus]

4.7e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1856185.1 hypothetical protein Lal_00046585 [Lupinus albus]

4.7e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1891686.1 hypothetical protein Lal_00049258, partial [Lupinus albus]

4.7e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDF7 Uncharacterized protein

1.3e-52

100

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5L4S7 Uncharacterized protein

2.3e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5L9N6 Uncharacterized protein

2.3e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5LBQ2 Uncharacterized protein

2.3e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5P2N0 Uncharacterized protein

2.3e-49

95.54

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTGAGCACCGGTCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTACGAACAACTGCGAAAGCATTTGCCAAGGA
TGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGA
CTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCT
GCGGCTTAA

mRNA sequence

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Protein sequence

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MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEP
AA

Lsi08G002280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome