; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G002310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TAR1
Genome locationchr08:5130662..5131670
RNA-Seq ExpressionLsi08G002310
SyntenyLsi08G002310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047137.1 uncharacterized protein E6C27_scaffold852G00010 [Cucumis melo var. makuwa]4.5e-7691.14Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLH
        LGALDSV              NSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLH
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLH

KAF3951938.1 hypothetical protein CMV_022457 [Castanea mollissima]3.1e-9371.54Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA             VLLTKNGP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC
        LGALDS+ARLN+AAAPSYLFK                                      CSHSNPSQKIKVGR C+P GDP +QLPCALRVY PV+SHTC
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC

Query:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA
        QTPWSVFQDG NGEP GRCQERADAEAR +ARAASHDR +DVS G+T  +AWA
Subjt:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA

KAF3969134.1 hypothetical protein CMV_007046 [Castanea mollissima]1.8e-10173.48Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSA-----------GTVTRLPVHP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA           GTVTRLPVHP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSA-----------GTVTRLPVHP

Query:  ASPVLLTKNGPLGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCAL
        ASPVLLTKNGPLGALDS+ARLN+AAAPSYLFK                                      CSHSNPSQKIKVGR C+P GDP +QLPCAL
Subjt:  ASPVLLTKNGPLGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCAL

Query:  RVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA
        RVY PV+SHTCQTPWSVFQDG NGEP GRCQERADAEAR +ARAASHDR +DVS G+T  +AWA
Subjt:  RVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA

KAF7801175.1 Protein TAR1 [Senna tora]3.5e-10075.4Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSA-GTVTRLPVHPASPVLLTKNG
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLI AW LPRRPGIGRALQRHPFSGLV +  GTVTRLPVHPASPVLLTKNG
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSA-GTVTRLPVHPASPVLLTKNG

Query:  PLGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHT
        PLGALDSVARLN+AAAPSYLFK                                      CSHSNPSQKIKVGR C+PL DP +QLPCALRVYSPV+SHT
Subjt:  PLGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHT

Query:  CQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVTKAWA
        CQTPWSVFQDG NGEP GR QERA AEAR  ARAA H+RDDDVSTG++ AWA
Subjt:  CQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVTKAWA

TKS17466.1 hypothetical protein D5086_0000012900 [Populus alba]5.9e-9271.26Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAG-----TVTRLPVHPASPVLL
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAG     ++     H   P +L
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAG-----TVTRLPVHPASPVLL

Query:  TKNGPLGALDSVARLNKAAAPSYLFKNSPA-GSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSP
            PL  L    R    A+  +L+    A  SSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSP
Subjt:  TKNGPLGALDSVARLNKAAAPSYLFKNSPA-GSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSP

Query:  VNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARP----KARAASHDRDDDVSTGVTKAWA
        V+SHTCQTPWSVF   S  +  G  +    A   P     ARAA HDRDD VSTGV+KA A
Subjt:  VNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARP----KARAASHDRDDDVSTGVTKAWA

TrEMBL top hitse value%identityAlignment
A0A0D2ZQ57 Uncharacterized protein5.2e-7861.09Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLI AWLLPRRPGIGRALQRHPFSGLVDSA             +LLTKNGP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGN-----------FGGNQLLDGSISL----------SPLYPSQTN--DLHACSHSNPSQKIKV------
        LGALDS+  LNKAA PS+L  N P  +S  +                 + +  S+SL          +PL  S  +     ACSHSNPSQKIKV      
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGN-----------FGGNQLLDGSISL----------SPLYPSQTN--DLHACSHSNPSQKIKV------

Query:  ---------GRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHD
                    C P+ DP +QLP ALRVYSPV+SHTCQTPWSVFQDGSNGEPT R  E ADA+AR + RAA HD
Subjt:  ---------GRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHD

A0A2N9I9H1 Uncharacterized protein2.3e-7864.43Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA                     
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC
          +L +  R++   AP  L  +SP        +FG  Q+                    CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTC
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC

Query:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA
        QTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AWA
Subjt:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA

A0A2N9IDP5 Uncharacterized protein2.3e-7864.43Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA                     
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC
          +L +  R++   AP  L  +SP        +FG  Q+                    CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTC
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC

Query:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA
        QTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AWA
Subjt:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA

A0A2N9IJL7 Uncharacterized protein2.3e-7864.43Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA                     
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGP

Query:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC
          +L +  R++   AP  L  +SP        +FG  Q+                    CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTC
Subjt:  LGALDSVARLNKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTC

Query:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA
        QTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AWA
Subjt:  QTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAWA

A0A4V6XX95 Uncharacterized protein2.9e-9271.26Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAG-----TVTRLPVHPASPVLL
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAG     ++     H   P +L
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAG-----TVTRLPVHPASPVLL

Query:  TKNGPLGALDSVARLNKAAAPSYLFKNSPA-GSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSP
            PL  L    R    A+  +L+    A  SSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSP
Subjt:  TKNGPLGALDSVARLNKAAAPSYLFKNSPA-GSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSP

Query:  VNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARP----KARAASHDRDDDVSTGVTKAWA
        V+SHTCQTPWSVF   S  +  G  +    A   P     ARAA HDRDD VSTGV+KA A
Subjt:  VNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARP----KARAASHDRDDDVSTGVTKAWA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCGCGGCTC
AACAAAGCAGCCGCGCCGTCCTACCTATTTAAAAACTCGCCCGCGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTC
GCCCCTATACCCAAGTCAGACGAACGATTTGCACGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTC
AGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAG
GAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCGCGGCTC
AACAAAGCAGCCGCGCCGTCCTACCTATTTAAAAACTCGCCCGCGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTC
GCCCCTATACCCAAGTCAGACGAACGATTTGCACGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTC
AGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAG
GAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG
Protein sequenceShow/hide protein sequence
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAGTVTRLPVHPASPVLLTKNGPLGALDSVARL
NKAAAPSYLFKNSPAGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQ
ERADAEARPKARAASHDRDDDVSTGVTKAWA