CuGenDBv2

Gene ID	Lsi08G002330
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:5138522..5144637
RNA-Seq Expression	Lsi08G002330
Synteny	Lsi08G002330
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3951939.1 hypothetical protein CMV_022458 [Castanea mollissima]

5.5e-100

95.98

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK  E  VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

KAF3969133.1 hypothetical protein CMV_007045 [Castanea mollissima]

5.5e-100

95.98

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK  E  VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

KAG6384448.1 hypothetical protein SASPL_155733 [Salvia splendens]

5.9e-102

97.49

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHA TRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

KAG6627132.1 hypothetical protein CIPAW_15G104500 [Carya illinoinensis]

2.7e-99

94.97

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK     VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSF RGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR WHSVLRIFKGRRGRTGHHA CGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

KAG6654558.1 hypothetical protein CIPAW_05G153300 [Carya illinoinensis]

5.5e-100

95.48

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK     VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR WHSVLRIFKGRRGRTGHHA CGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

TrEMBL top hits

e value

%identity

Alignment

A0A2G2UY87 Uncharacterized protein

2.3e-96

93.97

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTY TPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSEL VRR GKAPEG VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSR YGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKG R RTGHH T GALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

A0A2P5XL80 Uncharacterized protein

4.3e-98

94.47

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVF FR   PTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSS P ADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVP TRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

A0A6A1VAU1 Uncharacterized protein

9.8e-95

73.33

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGH        SE TVRRPGK  E  VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ-
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR WHSVLRIFKGRRGRTGHHA CGALPA GPYLRLSRFQ 
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ-

Query:  ARPLCHLQYPVAYLSRLQRILPVARWKLRYKAAPATHPSRGLSQR-----HVPLGAGRPLLLVGNRAMGA
         + +C         +R       A     Y + P T P   +S +      +P+    P+LL  N  +GA
Subjt:  ARPLCHLQYPVAYLSRLQRILPVARWKLRYKAAPATHPSRGLSQR-----HVPLGAGRPLLLVGNRAMGA

A0A7N2KQS8 Uncharacterized protein

9.2e-101

76.3

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Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK  E  VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ-
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ 
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ-

Query:  ARPLCHLQYPVAYLSRLQRILPVARWKLRYKAAPATHPSRGLSQR-----HVPLGAGRPLLLVGNRAMGA
         + +C         +R +     A     Y + P T P   +S +      +P+    P+LL  N  +GA
Subjt:  ARPLCHLQYPVAYLSRLQRILPVARWKLRYKAAPATHPSRGLSQR-----HVPLGAGRPLLLVGNRAMGA

A0A7N2N9Q9 Uncharacterized protein

2.7e-100

95.98

Show/hide

Query:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS
        ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSE TVRRPGK  E  VPSPSPGRHAATRSRRGS
Subjt:  ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGS

Query:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ
        SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGR  HSVLRIFKGRRGRTGHHATCGALPA GPYLRLSRFQ
Subjt:  SSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC
TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGAC
GCCCGGGGAAGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGG
TTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTG
TTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGTGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCG
GTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTA
CCCGTCGCTCGGTGGAAATTACGTTACAAGGCGGCCCCCGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGACGGCCCCTACTGCTGGT
CGGCAATCGAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAA
GCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG

mRNA sequence

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Protein sequence

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ITLKVVVFHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADG
FGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQARPLCHLQYPVAYLSRLQRIL
PVARWKLRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY

Lsi08G002330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome