CuGenDBv2

Gene ID	Lsi08G002500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	RNA-directed DNA methylation 4
Genome location	chr08:5643639..5650017
RNA-Seq Expression	Lsi08G002500
Synteny	Lsi08G002500
Gene Ontology terms	GO:0006306 - DNA methylation (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009791 - post-embryonic development (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR013883 - Transcription factor Iwr1 domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051104.1 RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo var. makuwa]

2.6e-153

76.08

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET +K                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+FVQHVETLRSSEAT DIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE VAKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQLHD+YHIYDIVRLD NEISSEAP++EQMS EDQSMLSSYLPLLREFIPSAAAEIESDIDA+MMKQ+LPVDDYVYDYYTVK +VEI +DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE++SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY DFDEDD 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSNGG DEGEDW
Subjt:  ADSFDYDSNGGHDEGEDW

XP_004139832.1 RNA-directed DNA methylation 4 [Cucumis sativus]

2.2e-152

76.08

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSV K VDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISET HK                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+FVQHVETLRSS+ATVDIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE  AKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQL D+YHIYDIVRLD NEISSE+PK+EQMS EDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQ+LPVDDYVYDYYTVKN+VEIA+DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE+ SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY D DE+D 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSN GHDEGEDW
Subjt:  ADSFDYDSNGGHDEGEDW

XP_008447116.1 PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo]

1.7e-152

75.6

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET +K                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+ VQHVETLRSSEAT DIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE VAKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQLHD+YHIYDIVRLD NEISSEAP++EQMS EDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQ+LPVDDYVYDYYTVK +VEI +DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE++SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY DFDEDD 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSNGGHD+GEDW
Subjt:  ADSFDYDSNGGHDEGEDW

XP_022154907.1 RNA-directed DNA methylation 4 [Momordica charantia]

1.6e-150

74.7

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA+IGESSSSVPK  D KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETF                                       
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                      + ELK KK+FVQHVETL+SSEATVDIVQSFVAPDAA T+EN+VKNEERRRNFKREI RQDQLL KARQEQE +AKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKDAKDDQLHD+YHIYDIVRLD N+ISSE P++E MS EDQSMLSSYLPLLREFIPSAAAEIESDI ANMMKQD+PVDDYVYDYYTVK+++EIA+DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDD---KQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDE
        SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNP FDYPDEVSEE+DEL +ESSN E +DNDDD   KQSSE+ND E+ + S  D+ QLYEDEIYGDFD+
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDD---KQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDE

Query:  DDADSFDYDSNGGHDEGED
        DDA+SFD DSNGGHDEGED
Subjt:  DDADSFDYDSNGGHDEGED

XP_038885561.1 RNA-directed DNA methylation 4 [Benincasa hispida]

7.3e-164

80.38

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MASIGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERP KRPLLDFENLSISETFHK                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+FVQHVETLRSSEATVDIVQSF APDAA TIENN+KNEERRR FK+EISRQDQLLVKARQEQE +AKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPK-EEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDD
        KGVKD+KDDQLHDIYHIYDIVRLDANEIS EAPK EEQMS +DQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLP+DDYVYDYYTVK+NVEIADDD
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPK-EEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDD

Query:  ASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD
        ASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVS+EE ELE+ S NDELEDNDDDKQSSESN+ ED  FSEEDK+QLYEDEIYGDFDEDD
Subjt:  ASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYD+NGGHDEGEDW
Subjt:  ADSFDYDSNGGHDEGEDW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5Q3 Uncharacterized protein

1.1e-152

76.08

Show/hide

Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSV K VDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISET HK                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+FVQHVETLRSS+ATVDIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE  AKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQL D+YHIYDIVRLD NEISSE+PK+EQMS EDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQ+LPVDDYVYDYYTVKN+VEIA+DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE+ SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY D DE+D 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSN GHDEGEDW
Subjt:  ADSFDYDSNGGHDEGEDW

A0A1S3BG45 RNA-directed DNA methylation 4-like isoform X2

1.3e-150

75.36

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET +K                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+ VQHVETLRSSEAT DIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE VAKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQLHD+YHIYDIVRLD NEISSEAP+  QMS EDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQ+LPVDDYVYDYYTVK +VEI +DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE++SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY DFDEDD 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSNGGHD+GEDW
Subjt:  ADSFDYDSNGGHDEGEDW

A0A1S4DWJ0 RNA-directed DNA methylation 4-like isoform X1

8.2e-153

75.6

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET +K                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+ VQHVETLRSSEAT DIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE VAKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQLHD+YHIYDIVRLD NEISSEAP++EQMS EDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQ+LPVDDYVYDYYTVK +VEI +DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE++SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY DFDEDD 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSNGGHD+GEDW
Subjt:  ADSFDYDSNGGHDEGEDW

A0A5D3BU38 RNA-directed DNA methylation 4-like isoform X1

1.3e-153

76.08

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA IGESSSSVPK VDEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET +K                                     
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ELK KK+FVQHVETLRSSEAT DIVQSFVAPDAA TIENN+KNEERRRNFKREISRQDQLLVKARQEQE VAKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKD KDDQLHD+YHIYDIVRLD NEISSEAP++EQMS EDQSMLSSYLPLLREFIPSAAAEIESDIDA+MMKQ+LPVDDYVYDYYTVK +VEI +DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-
        S+PFPLIQVDDLD +DGP DSDYE+DDSNAENNPCFDYPD     E+ELE++SSNDELED+DD+KQSSESND E+ E SEE+KV+LYEDEIY DFDEDD 
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDD-

Query:  ADSFDYDSNGGHDEGEDW
        ADSFDYDSNGG DEGEDW
Subjt:  ADSFDYDSNGGHDEGEDW

A0A6J1DMY7 RNA-directed DNA methylation 4

7.7e-151

74.7

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        MA+IGESSSSVPK  D KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETF                                       
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                      + ELK KK+FVQHVETL+SSEATVDIVQSFVAPDAA T+EN+VKNEERRRNFKREI RQDQLL KARQEQE +AKNARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KGVKDAKDDQLHD+YHIYDIVRLD N+ISSE P++E MS EDQSMLSSYLPLLREFIPSAAAEIESDI ANMMKQD+PVDDYVYDYYTVK+++EIA+DDA
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDD---KQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDE
        SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNP FDYPDEVSEE+DEL +ESSN E +DNDDD   KQSSE+ND E+ + S  D+ QLYEDEIYGDFD+
Subjt:  SNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDD---KQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDE

Query:  DDADSFDYDSNGGHDEGED
        DDA+SFD DSNGGHDEGED
Subjt:  DDADSFDYDSNGGHDEGED

SwissProt top hits

e value

%identity

Alignment

Q8GYP3 RNA-directed DNA methylation 4

2.3e-59

40.6

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Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        M  +GESS+     V+EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++  +G  +++                               
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ++KPKK+ V+H+ET+  SE T DI+ SF   D      +  K EER+  FK++ +R++Q L K+ Q+Q+  ++NARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KG K+     +H+  H +D++R+D  E    A  +E  S EDQ ML+S+LPLLRE IP+AA EIE+DI      Q    ++YVYDYY V   ++I++D +
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDED
         N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP    EEE+E E E  +D+ +D  ++++S  S++ +D E S+     +  D+ + D+ ED
Subjt:  SNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDED

Arabidopsis top hits

e value

%identity

Alignment

AT2G30280.1 RNA-directed DNA methylation 4

1.6e-60

40.6

Show/hide

Query:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL
        M  +GESS+     V+EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++  +G  +++                               
Subjt:  MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSL

Query:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR
                        ++KPKK+ V+H+ET+  SE T DI+ SF   D      +  K EER+  FK++ +R++Q L K+ Q+Q+  ++NARFEQIWRSR
Subjt:  FGWGIKLNNDSTGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSR

Query:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA
        KG K+     +H+  H +D++R+D  E    A  +E  S EDQ ML+S+LPLLRE IP+AA EIE+DI      Q    ++YVYDYY V   ++I++D +
Subjt:  KGVKDAKDDQLHDIYHIYDIVRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDA

Query:  SNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDED
         N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP    EEE+E E E  +D+ +D  ++++S  S++ +D E S+     +  D+ + D+ ED
Subjt:  SNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAGCATTGGTGAGAGCTCTTCTTCTGTTCCCAAACCCGTGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAATCTCGACTTGATGCATTATG
GCTGGAAATCAACGAGAGGCCATTGAAGCGACCGCTCTTGGATTTTGAGAATTTATCAATTTCAGAAACATTCCACAAAGGTCTGATCATTTCTAAACTTGTACTTACGT
TCTTTTCTTTTCCTTACACCAACCACTCGGTAATCTGCATAGATGAGAAGTGGAAATGGCGATTAACAACTATGTCTCTATTTGGTTGGGGTATCAAGCTCAATAATGAT
TCTACTGGATTTCACATGGAGCTAAAGCCTAAGAAGTTATTTGTACAGCATGTTGAGACATTAAGAAGCTCTGAGGCCACTGTTGACATTGTTCAGTCCTTTGTGGCACC
TGATGCTGCTTGCACCATTGAAAATAACGTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGATTTCAAGACAAGATCAGTTGTTGGTTAAAGCTAGACAAGAAC
AGGAGGCTGTGGCAAAAAACGCTAGATTTGAGCAGATATGGAGAAGTAGGAAAGGGGTTAAAGATGCAAAAGATGACCAGTTACATGACATATATCATATCTATGATATT
GTTCGTCTTGATGCAAATGAAATATCAAGTGAAGCACCAAAAGAGGAACAAATGTCTCCGGAGGATCAGAGTATGTTATCAAGTTACCTGCCTTTACTAAGGGAGTTTAT
TCCAAGTGCTGCTGCGGAGATTGAATCAGATATAGATGCAAACATGATGAAACAAGATTTGCCTGTAGATGATTATGTATATGACTACTATACTGTGAAGAACAATGTGG
AGATTGCTGATGACGATGCTTCTAATCCATTTCCTTTGATACAAGTTGATGATTTGGATCTATATGATGGGCCTGACGACTCAGATTATGAAAGTGACGATTCAAATGCT
GAAAACAATCCATGCTTCGATTACCCGGATGAGGTTTCGGAAGAAGAAGACGAGTTGGAGAATGAATCTTCAAATGATGAATTGGAAGATAATGACGATGACAAGCAATC
CTCAGAAAGCAATGATCATGAAGATGGGGAGTTCTCGGAGGAGGACAAAGTTCAATTATACGAGGATGAAATATATGGTGATTTTGATGAAGATGATGCTGATAGCTTTG
ATTATGATAGTAATGGTGGTCATGATGAAGGTGAAGATTGGTGA

mRNA sequence

Show/hide mRNA sequence

AAAATACAATTCGATCGCCCATTGAATTCGTTTTCAAATTTGTGTTTTCAAATTCTCTACCAAATCTCCCAAAATCCCACAAATGCCCTAAAATTAAACTCTCTCCTCAA
AACCGACCAACTCGGCAGCATCCTAACACCCACGGCGACGCTCTCTGTGACGTTCGATGTGTGCGACGGCGGTGCAGCAGAGATCGACGGCGGCTTAATCCTTGTTCTCC
GGCAATTCGCGAGCAAAATCGGACTAGGAATCAACGAGGTTCATACCCTGTGCAGACCAGCTACGCTAACAACGACTTGCAGCAGCTATTTTTCAGCGTTGTAGCAGCGA
GTTTTCCTCATTCTGGCAAGGTTCTCTCTTCATCATTGCTTGCGCTAGCCACATCAATTGATGCCTTAGTGAGGGTTCGGTCTGAAAGATCAGGGACTGGAGAAGGCAGT
GGTGAAACAACGCATGCTTCCAAGTCTAGGGAGACTGCTATTTCATTTGCTAAAAAATTGTTCACTGAGCATAAATACTTCATAGACCTTTTGAAGTCCAAAAGTACCAT
TGTCCGATCTGACCTATTCAGTATTAAGGAGCCTTGCCAAAAATATTCCTCATGCTTTTAAGGAATAGAATATAAAACTATTGTCTGTCATATGGCCAGCATTGGTGAGA
GCTCTTCTTCTGTTCCCAAACCCGTGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAATCTCGACTTGATGCATTATGGCTGGAAATCAACGAGAGG
CCATTGAAGCGACCGCTCTTGGATTTTGAGAATTTATCAATTTCAGAAACATTCCACAAAGGTCTGATCATTTCTAAACTTGTACTTACGTTCTTTTCTTTTCCTTACAC
CAACCACTCGGTAATCTGCATAGATGAGAAGTGGAAATGGCGATTAACAACTATGTCTCTATTTGGTTGGGGTATCAAGCTCAATAATGATTCTACTGGATTTCACATGG
AGCTAAAGCCTAAGAAGTTATTTGTACAGCATGTTGAGACATTAAGAAGCTCTGAGGCCACTGTTGACATTGTTCAGTCCTTTGTGGCACCTGATGCTGCTTGCACCATT
GAAAATAACGTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGATTTCAAGACAAGATCAGTTGTTGGTTAAAGCTAGACAAGAACAGGAGGCTGTGGCAAAAAA
CGCTAGATTTGAGCAGATATGGAGAAGTAGGAAAGGGGTTAAAGATGCAAAAGATGACCAGTTACATGACATATATCATATCTATGATATTGTTCGTCTTGATGCAAATG
AAATATCAAGTGAAGCACCAAAAGAGGAACAAATGTCTCCGGAGGATCAGAGTATGTTATCAAGTTACCTGCCTTTACTAAGGGAGTTTATTCCAAGTGCTGCTGCGGAG
ATTGAATCAGATATAGATGCAAACATGATGAAACAAGATTTGCCTGTAGATGATTATGTATATGACTACTATACTGTGAAGAACAATGTGGAGATTGCTGATGACGATGC
TTCTAATCCATTTCCTTTGATACAAGTTGATGATTTGGATCTATATGATGGGCCTGACGACTCAGATTATGAAAGTGACGATTCAAATGCTGAAAACAATCCATGCTTCG
ATTACCCGGATGAGGTTTCGGAAGAAGAAGACGAGTTGGAGAATGAATCTTCAAATGATGAATTGGAAGATAATGACGATGACAAGCAATCCTCAGAAAGCAATGATCAT
GAAGATGGGGAGTTCTCGGAGGAGGACAAAGTTCAATTATACGAGGATGAAATATATGGTGATTTTGATGAAGATGATGCTGATAGCTTTGATTATGATAGTAATGGTGG
TCATGATGAAGGTGAAGATTGGTGACGGTCCTATCGCTGAATATTCAGTAGTACAGGACAGGTTTTTCATCCTTGGGAGGATGATGTTTTTTCCATCACTTTTCCTATCC
GGTATTTTTTTATTATTTTAATTTGTTAGGGTGTAGCGTTACGGGTTTAAGCGAGTTGCTTGCGGAGGAATGTCTTTGCGATGGTTAGGGATGTAACGTCGGAGATTTAG
AGGTCGAATTTCATTTTGCTGTTTGAGATTCTATGAAATGGAATGACCTCAAGTCGCATATAGTAAGTCATACCAGCTTTTGATCAACAGGTTCATCAACCAGTTTTCTT
TGTAATTAAGCCTTTTGCATTTTATTTTCTGATATAAAGCAATAATATTAGATAAAAGTTCATTTCAAATGTAATGGTGAAGTTGAGTTTGG

Protein sequence

Show/hide protein sequence

MASIGESSSSVPKPVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFHKGLIISKLVLTFFSFPYTNHSVICIDEKWKWRLTTMSLFGWGIKLNND
STGFHMELKPKKLFVQHVETLRSSEATVDIVQSFVAPDAACTIENNVKNEERRRNFKREISRQDQLLVKARQEQEAVAKNARFEQIWRSRKGVKDAKDDQLHDIYHIYDI
VRLDANEISSEAPKEEQMSPEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQDLPVDDYVYDYYTVKNNVEIADDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNA
ENNPCFDYPDEVSEEEDELENESSNDELEDNDDDKQSSESNDHEDGEFSEEDKVQLYEDEIYGDFDEDDADSFDYDSNGGHDEGEDW

Lsi08G002500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome