; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G002640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr08:6129315..6129950
RNA-Seq ExpressionLsi08G002640
SyntenyLsi08G002640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.4e-5358.1Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR
        DSLNTEA+Q+RKKNKRLLRNI  LH E                          NAL+EQAISSQ  A   E LQHS  EYKSQLIEAE +N FLQ+AV  
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR

Query:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG
         E QLLI RKAREV TDDY QL E+Y+EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM  + DQFS QA TL+QG+IPT+   +ELS FLG+IG
Subjt:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG

Query:  QYLGRLRCYH
        Q LGR  CYH
Subjt:  QYLGRLRCYH

KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.8e-4658.33Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNTEA+Q+RKKNK LLRNI  LH E       I ++    + E LQ+S  EYKSQLI+ E +N FLQ+AV   E QLLI RKA+EV TDDY QL E+Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRL
        +EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM  M DQFS QA TL+QG+IPT+  ++ELS FLG+IGQYL +L
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRL

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.5e-5261.96Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNTEA+Q+RKKNKRLLRNI  LH E       I ++  A   E LQHS  EYKSQLIEAE +N FLQ+AV   E QLLI RKAR+V TDDY QL E+Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRLRCYH
        +EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM ++ DQFS QA TL+QG+IPT+   KELS FLG+IGQ LGR RCYH
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRLRCYH

KAA0051514.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.0e-4560Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNT+A+QMRKKNKRLLRNI  LH E       + ++NI  + E L  S  EYKSQ+IEAE +N FLQEAV   EGQLLI  KAR+VAT+DY QL E Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQ
        +EMS D  IWR+EY+ +R KY  AR Q+EQG +KLRQM +M DQF  QA TLQ+G+IP +  +KELS FLG+IG+
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQ

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.3e-5357.62Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR
        DSLNTEA+QMRKKNKRLLRNI  LH E                          NAL+EQAISSQ  A   E LQH   EYKSQLIEA+ +N FLQ+AV  
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR

Query:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG
         E QLLI RKAREV  DDY QL E+Y+EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM ++ DQFS QA TL+QG+IPT+   KELS FLG+IG
Subjt:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG

Query:  QYLGRLRCYH
        Q LGR  CYH
Subjt:  QYLGRLRCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like6.6e-5458.1Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR
        DSLNTEA+Q+RKKNKRLLRNI  LH E                          NAL+EQAISSQ  A   E LQHS  EYKSQLIEAE +N FLQ+AV  
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR

Query:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG
         E QLLI RKAREV TDDY QL E+Y+EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM  + DQFS QA TL+QG+IPT+   +ELS FLG+IG
Subjt:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG

Query:  QYLGRLRCYH
        Q LGR  CYH
Subjt:  QYLGRLRCYH

A0A5A7T0F3 Glial fibrillary acidic protein-like1.3e-4658.33Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNTEA+Q+RKKNK LLRNI  LH E       I ++    + E LQ+S  EYKSQLI+ E +N FLQ+AV   E QLLI RKA+EV TDDY QL E+Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRL
        +EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM  M DQFS QA TL+QG+IPT+  ++ELS FLG+IGQYL +L
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRL

A0A5A7TXA1 Glial fibrillary acidic protein-like7.3e-5361.96Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNTEA+Q+RKKNKRLLRNI  LH E       I ++  A   E LQHS  EYKSQLIEAE +N FLQ+AV   E QLLI RKAR+V TDDY QL E+Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRLRCYH
        +EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM ++ DQFS QA TL+QG+IPT+   KELS FLG+IGQ LGR RCYH
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRLRCYH

A0A5A7U875 Glial fibrillary acidic protein-like1.9e-4560Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY
        DSLNT+A+QMRKKNKRLLRNI  LH E       + ++NI  + E L  S  EYKSQ+IEAE +N FLQEAV   EGQLLI  KAR+VAT+DY QL E Y
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEY

Query:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQ
        +EMS D  IWR+EY+ +R KY  AR Q+EQG +KLRQM +M DQF  QA TLQ+G+IP +  +KELS FLG+IG+
Subjt:  REMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQ

A0A5A7VDD9 Glial fibrillary acidic protein-like1.1e-5357.62Show/hide
Query:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR
        DSLNTEA+QMRKKNKRLLRNI  LH E                          NAL+EQAISSQ  A   E LQH   EYKSQLIEA+ +N FLQ+AV  
Subjt:  DSLNTEAVQMRKKNKRLLRNIVALHNE--------------------------NALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVAR

Query:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG
         E QLLI RKAREV  DDY QL E+Y+EMS D  +W+DEY+ +R KY DA  ++E+GA+KLRQM ++ DQFS QA TL+QG+IPT+   KELS FLG+IG
Subjt:  FEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAIWRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIG

Query:  QYLGRLRCYH
        Q LGR  CYH
Subjt:  QYLGRLRCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTTGAATACTGAAGCAGTTCAGATGAGAAAGAAAAATAAGAGATTATTAAGAAACATTGTTGCCTTACACAATGAGAATGCCTTGAACGAGCAAGCCATATC
CTCTCAAAACATCGCTGCAAAATTTGAAGCTCTACAACACTCAACTAATGAATATAAATCTCAGCTTATAGAAGCAGAATGTCGCAATACATTTCTCCAGGAGGCTGTTG
CAAGATTTGAAGGCCAGTTGTTGATATATCGTAAGGCGCGAGAGGTTGCAACAGATGACTATACTCAATTGAAGGAAGAGTATCGAGAAATGTCAACAGATGTTGCGATA
TGGAGAGACGAATATGACATAGTGAGACACAAATATTATGACGCTAGAAATCAGATTGAACAAGGAGCTAAGAAATTACGACAGATGACGAAAATGGTAGATCAATTCTC
AGCACAAGCAATGACTCTCCAGCAAGGCATCATACCTACACAGCACAACAGCAAAGAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAATACCTCGGGCGTCTTAGGTGCT
ACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTTGAATACTGAAGCAGTTCAGATGAGAAAGAAAAATAAGAGATTATTAAGAAACATTGTTGCCTTACACAATGAGAATGCCTTGAACGAGCAAGCCATATC
CTCTCAAAACATCGCTGCAAAATTTGAAGCTCTACAACACTCAACTAATGAATATAAATCTCAGCTTATAGAAGCAGAATGTCGCAATACATTTCTCCAGGAGGCTGTTG
CAAGATTTGAAGGCCAGTTGTTGATATATCGTAAGGCGCGAGAGGTTGCAACAGATGACTATACTCAATTGAAGGAAGAGTATCGAGAAATGTCAACAGATGTTGCGATA
TGGAGAGACGAATATGACATAGTGAGACACAAATATTATGACGCTAGAAATCAGATTGAACAAGGAGCTAAGAAATTACGACAGATGACGAAAATGGTAGATCAATTCTC
AGCACAAGCAATGACTCTCCAGCAAGGCATCATACCTACACAGCACAACAGCAAAGAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAATACCTCGGGCGTCTTAGGTGCT
ACCATTAG
Protein sequenceShow/hide protein sequence
MDSLNTEAVQMRKKNKRLLRNIVALHNENALNEQAISSQNIAAKFEALQHSTNEYKSQLIEAECRNTFLQEAVARFEGQLLIYRKAREVATDDYTQLKEEYREMSTDVAI
WRDEYDIVRHKYYDARNQIEQGAKKLRQMTKMVDQFSAQAMTLQQGIIPTQHNSKELSRFLGVIGQYLGRLRCYH