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Lsi08G002660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:6293212..6295878
RNA-Seq ExpressionLsi08G002660
SyntenyLsi08G002660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039201.1 uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa]7.1e-1045.22Show/hide
Query:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+DS+EK+ K  + E+D     HC + L IF    S+++AF+ I++F GFK+     ++ PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQ
         +PPPP  STGGGGQ
Subjt:  RIPPPPRRSTGGGGQ

XP_004138360.2 uncharacterized protein LOC101208454 [Cucumis sativus]6.6e-0842.74Show/hide
Query:  MEDSSEKTSKL-NTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+ S+EK+ K  + E+D     HC + L IF    S+++ F+ I++F GFK+      + PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSKL-NTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQTD
         +PP P  STGGGGQ D
Subjt:  RIPPPPRRSTGGGGQTD

XP_008464348.1 PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]7.1e-1045.22Show/hide
Query:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+DS+EK+ K  + E+D     HC + L IF    S+++AF+ I++F GFK+     ++ PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQ
         +PPPP  STGGGGQ
Subjt:  RIPPPPRRSTGGGGQ

XP_022158220.1 uncharacterized protein LOC111024756 [Momordica charantia]2.2e-1146.72Show/hide
Query:  EKTSKLNTETDFGAHCCLCLP-IFCNCKSLVEAFMFIMKFLGFK--KQHTH------TSSAPYRPLSCSPELSYTAASDPPPTDA----------SGLES
        +K  + + ETD   HC  CLP IF NC SL++A   +++FLGF+   QH H      T++  Y  +S SPEL Y   SD PPT A           G ES
Subjt:  EKTSKLNTETDFGAHCCLCLP-IFCNCKSLVEAFMFIMKFLGFK--KQHTH------TSSAPYRPLSCSPELSYTAASDPPPTDA----------SGLES

Query:  ELSRRRIPPPPRRSTGGGGQTD
        E SRR   PPPRRSTGGGGQT+
Subjt:  ELSRRRIPPPPRRSTGGGGQTD

XP_038886557.1 uncharacterized protein LOC120076731 [Benincasa hispida]9.9e-1246.96Show/hide
Query:  DSSEKTSKL---NTETDFGAHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRRRI
        DS EK+ K    + ETD  +HC + L I   C S+++AF+ I++FLGF     + +  PYRP   SPE  YT  SDP      PP D S  ESE  R  +
Subjt:  DSSEKTSKL---NTETDFGAHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRRRI

Query:  PPPPRRSTGGGGQTD
        PPPP  STGGGGQTD
Subjt:  PPPPRRSTGGGGQTD

TrEMBL top hitse value%identityAlignment
A0A0A0KBZ4 Uncharacterized protein3.2e-0842.74Show/hide
Query:  MEDSSEKTSKL-NTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+ S+EK+ K  + E+D     HC + L IF    S+++ F+ I++F GFK+      + PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSKL-NTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQTD
         +PP P  STGGGGQ D
Subjt:  RIPPPPRRSTGGGGQTD

A0A1S3CLD8 uncharacterized protein LOC1035022563.4e-1045.22Show/hide
Query:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+DS+EK+ K  + E+D     HC + L IF    S+++AF+ I++F GFK+     ++ PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQ
         +PPPP  STGGGGQ
Subjt:  RIPPPPRRSTGGGGQ

A0A5D3D4J4 Uncharacterized protein3.4e-1045.22Show/hide
Query:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR
        M+DS+EK+ K  + E+D     HC + L IF    S+++AF+ I++F GFK+     ++ PYRP S S E  YTA S+P      PP D S  ESE  R 
Subjt:  MEDSSEKTSK-LNTETDFG--AHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDP------PPTDASGLESELSRR

Query:  RIPPPPRRSTGGGGQ
         +PPPP  STGGGGQ
Subjt:  RIPPPPRRSTGGGGQ

A0A6J1DV83 uncharacterized protein LOC1110247561.1e-1146.72Show/hide
Query:  EKTSKLNTETDFGAHCCLCLP-IFCNCKSLVEAFMFIMKFLGFK--KQHTH------TSSAPYRPLSCSPELSYTAASDPPPTDA----------SGLES
        +K  + + ETD   HC  CLP IF NC SL++A   +++FLGF+   QH H      T++  Y  +S SPEL Y   SD PPT A           G ES
Subjt:  EKTSKLNTETDFGAHCCLCLP-IFCNCKSLVEAFMFIMKFLGFK--KQHTH------TSSAPYRPLSCSPELSYTAASDPPPTDA----------SGLES

Query:  ELSRRRIPPPPRRSTGGGGQTD
        E SRR   PPPRRSTGGGGQT+
Subjt:  ELSRRRIPPPPRRSTGGGGQTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCAAGTGAAAAAACCAGCAAGCTGAATACTGAAACTGATTTTGGTGCTCACTGTTGTTTATGTCTACCAATCTTTTGCAACTGTAAGTCCCTGGTGGAAGC
TTTCATGTTCATTATGAAGTTTTTAGGGTTTAAAAAACAGCACACACATACTTCCTCTGCACCCTACCGGCCGCTCTCCTGCTCGCCGGAGCTTTCCTACACCGCCGCCT
CAGATCCGCCTCCGACCGATGCATCGGGTCTAGAAAGTGAGTTAAGTAGACGACGCATTCCTCCTCCACCACGGAGAAGCACCGGCGGCGGTGGCCAGACAGACTAA
mRNA sequenceShow/hide mRNA sequence
AAGAAGGCACACAGAGTCTCAGACACATACACCCTTTATCTAAAACCCTTCTTCAGCCAAAAAAAAAAAAAATATACATAAAAAAATGGAGGATTCAAGTGAAAAAACCA
GCAAGCTGAATACTGAAACTGATTTTGGTGCTCACTGTTGTTTATGTCTACCAATCTTTTGCAACTGTAAGTCCCTGGTGGAAGCTTTCATGTTCATTATGAAGTTTTTA
GGGTTTAAAAAACAGCACACACATACTTCCTCTGCACCCTACCGGCCGCTCTCCTGCTCGCCGGAGCTTTCCTACACCGCCGCCTCAGATCCGCCTCCGACCGATGCATC
GGGTCTAGAAAGTGAGTTAAGTAGACGACGCATTCCTCCTCCACCACGGAGAAGCACCGGCGGCGGTGGCCAGACAGACTAATTAATATATTATTATCCCTACGTAGCTT
ATTTTTTTTATATGTGATATGTATTAAAAGTTGGTATTAAATTTCTGTCGATATGTCAATATTTTCATCGATATTTTCATGTTTCATGGAGTTGATATCGACATGGGAGT
GAATTGAAATTTC
Protein sequenceShow/hide protein sequence
MEDSSEKTSKLNTETDFGAHCCLCLPIFCNCKSLVEAFMFIMKFLGFKKQHTHTSSAPYRPLSCSPELSYTAASDPPPTDASGLESELSRRRIPPPPRRSTGGGGQTD