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Lsi08G002670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:6304516..6305804
RNA-Seq ExpressionLsi08G002670
SyntenyLsi08G002670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039201.1 uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa]1.4e-2778.82Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ
        HC I LTI DSILQAFIAILRF GF  N PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HV PPPPWSTGGGGQ
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ

KAG7024354.1 hypothetical protein SDJN02_13168 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0951.85Show/hide
Query:  TICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQTD
        T+CD IL  FIAIL + GFN+ G  Y PTP                      DE EEESEY+R H  PPPPWSTGGGGQTD
Subjt:  TICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQTD

XP_004138360.2 uncharacterized protein LOC101208454 [Cucumis sativus]1.2e-2674.71Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHVPP-PPWSTGGGGQTD
        HC I LTI DSILQ FI+ILRF GF  + PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HVPP PPWSTGGGGQ D
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHVPP-PPWSTGGGGQTD

XP_008464348.1 PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]1.4e-2778.82Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ
        HC I LTI DSILQAFIAILRF GF  N PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HV PPPPWSTGGGGQ
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ

XP_038886557.1 uncharacterized protein LOC120076731 [Benincasa hispida]3.7e-3688.64Show/hide
Query:  SHCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQTD
        SHCPIFL ICDSILQAFIAILRFLGFN+NGPPY P PSSPEDCY  GSDPPSTAV+P DDESEEESEYYR HV PPPPWSTGGGGQTD
Subjt:  SHCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQTD

TrEMBL top hitse value%identityAlignment
A0A0A0KBZ4 Uncharacterized protein5.7e-2774.71Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHVPP-PPWSTGGGGQTD
        HC I LTI DSILQ FI+ILRF GF  + PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HVPP PPWSTGGGGQ D
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHVPP-PPWSTGGGGQTD

A0A1S3CLD8 uncharacterized protein LOC1035022566.8e-2878.82Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ
        HC I LTI DSILQAFIAILRF GF  N PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HV PPPPWSTGGGGQ
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ

A0A1S3CMT1 uncharacterized protein LOC1035022554.6e-0847.73Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPS-DDESEEESEYYRSH-VPPPPWSTGGGGQTD
        HCP FL+I + + Q  +A  RFLGF      + P  SS ED Y   S PP T VDP  +D  EEE E+ R +  PPPP S GGGG+T+
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPS-DDESEEESEYYRSH-VPPPPWSTGGGGQTD

A0A5A7T6U0 Uncharacterized protein4.6e-0847.73Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPS-DDESEEESEYYRSH-VPPPPWSTGGGGQTD
        HCP FL+I + + Q  +A  RFLGF      + P  SS ED Y   S PP T VDP  +D  EEE E+ R +  PPPP S GGGG+T+
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPS-DDESEEESEYYRSH-VPPPPWSTGGGGQTD

A0A5D3D4J4 Uncharacterized protein6.8e-2878.82Show/hide
Query:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ
        HC I LTI DSILQAFIAILRF GF  N PPY P  SS EDCY AGS+PPSTAVDP  D+SEEESEYYR HV PPPPWSTGGGGQ
Subjt:  HCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHV-PPPPWSTGGGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATTCCCACTGTCCTATTTTCTTGACGATCTGTGATTCAATCCTTCAAGCTTTCATTGCCATTTTGAGGTTCTTAGGTTTTAATAACAATGGACCACCTTACTG
TCCGACGCCCTCCTCACCGGAAGATTGCTATGCCGCCGGCTCAGATCCGCCTTCCACGGCGGTCGACCCATCCGACGACGAATCTGAGGAAGAAAGTGAGTACTACAGGT
CGCATGTTCCTCCTCCGCCGTGGAGCACCGGCGGCGGAGGTCAGACTGACTAA
mRNA sequenceShow/hide mRNA sequence
GGAAAGACTCTTGTCGGCAAAACCGAACATTCAAGATACCAATTCAAAACTTTCGCAGAAAAAAAAAAAATAAATAAAAAATGAAGGATTCCCACTGTCCTATTTTCTTG
ACGATCTGTGATTCAATCCTTCAAGCTTTCATTGCCATTTTGAGGTTCTTAGGTTTTAATAACAATGGACCACCTTACTGTCCGACGCCCTCCTCACCGGAAGATTGCTA
TGCCGCCGGCTCAGATCCGCCTTCCACGGCGGTCGACCCATCCGACGACGAATCTGAGGAAGAAAGTGAGTACTACAGGTCGCATGTTCCTCCTCCGCCGTGGAGCACCG
GCGGCGGAGGTCAGACTGACTAAGATATTGTAATAATCAGCGGCGGCTGTTTTGTAATCAAAGTATTGTTGGAG
Protein sequenceShow/hide protein sequence
MKDSHCPIFLTICDSILQAFIAILRFLGFNNNGPPYCPTPSSPEDCYAAGSDPPSTAVDPSDDESEEESEYYRSHVPPPPWSTGGGGQTD