CuGenDBv2

Gene ID	Lsi08G002750
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Enzymatic polyprotein
Genome location	chr08:6957559..6958275
RNA-Seq Expression	Lsi08G002750
Synteny	Lsi08G002750
Gene Ontology terms	GO:0005488 - binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032920.1 movement protein [Cucumis melo var. makuwa]

1.3e-44

49.01

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+S PYKTI+EDKV K GVREIKNIQHQLN +NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       EIP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HY
        HY
Subjt:  HY

KAA0037876.1 zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa]

1.3e-44

50.48

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  LAKK+ A G   MIK  + W+T SGKE+ ++YP EEE+YF HP +P IKMVSSPYKTI+EDKV K GVREIKNIQHQLN++NK L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+M+  R        EIP+I+PN+PIFQPN+F IG LR++  + LAEIN++L+   I +G   + +    K +N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

5.3e-46

48.56

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+SSPYKTI+EDKV K GVREIKNIQHQLN++NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       +IP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

1.7e-44

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  LAKK+ A G   MIK  + W+T SGKE+ ++YP EEE+YF HP +P IKMVSSPYKTI+EDKV K GVREIKNIQHQLN++NK L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+M+  R        EIP+I+PN+PIFQPN+F IG LR++  + LAEIN++L+   + +G   + +    K +N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

5.3e-46

48.56

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+SSPYKTI+EDKV K GVREIKNIQHQLN++NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       +IP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPT5 Movement protein

6.3e-45

49.01

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+S PYKTI+EDKV K GVREIKNIQHQLN +NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       EIP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HY
        HY
Subjt:  HY

A0A5A7T6R6 Zf-CCHC domain-containing protein/MP domain-containing protein

6.3e-45

50.48

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  LAKK+ A G   MIK  + W+T SGKE+ ++YP EEE+YF HP +P IKMVSSPYKTI+EDKV K GVREIKNIQHQLN++NK L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+M+  R        EIP+I+PN+PIFQPN+F IG LR++  + LAEIN++L+   I +G   + +    K +N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

A0A5A7UF59 Enzymatic polyprotein

2.6e-46

48.56

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+SSPYKTI+EDKV K GVREIKNIQHQLN++NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       +IP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

A0A5D3BEY3 Enzymatic polyprotein

8.2e-45

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  LAKK+ A G   MIK  + W+T SGKE+ ++YP EEE+YF HP +P IKMVSSPYKTI+EDKV K GVREIKNIQHQLN++NK L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+M+  R        EIP+I+PN+PIFQPN+F IG LR++  + LAEIN++L+   + +G   + +    K +N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGES-SKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

A0A5D3BG41 Enzymatic polyprotein

2.6e-46

48.56

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Query:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV
        RA+ +A  L KK+ A G   MIK  + W+T SGKE+ ++YP EEE+YFPHP +P IKM+SSPYKTI+EDKV K GVREIKNIQHQLN++NK+L+T+S++V
Subjt:  RARRDAKKLAKKI-AKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSV

Query:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN
        E+++   +       +IP+I+PN+PIFQPN+F IG+L++++ + LAEINK+L+   + ++ +++ +   PKG+N IK       S   +L V+   +MKN
Subjt:  EKMKEQRVNTDTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKI-EEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKN

Query:  HYSKLFPP
        HY +  PP
Subjt:  HYSKLFPP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCGAGCAAGAAGAGATGCAAAAAAGCTTGCTAAGAAGATTGCCAAAGGCAACTGCCATATGATCAAACAGGGTTCTACATGGATCACAACCAGTGGAAAAGAAATTTT
TGCTGACTATCCACTCGAGGAAGAATCTTACTTCCCTCATCCGGTTGTTCCGACTATCAAAATGGTGTCTTCGCCATACAAAACAATTGATGAAGACAAAGTTTCAAAGG
CAGGAGTTCGTGAAATAAAAAACATCCAACACCAGCTCAATTACTCAAATAAAGTTTTGACAACGCTCTCCCAATCTGTTGAAAAGATGAAAGAGCAAAGGGTCAATACT
GATACCAGTACTAAGGAAATTCCCAAGATTGATCCCAATCGACCAATCTTCCAACCAAATACCTTCCCCATTGGAAGATTAAGAGATAATTCAGAAGAGCTCCTTGCTGA
GATCAACAAGAAGCTTTCAATTTTCAAAATTGAGGAAGGAGAATCCTCGAAGAAAGCGAACACCCCCAAAGGCGTTAATTCTATAAAGAATGCCATTAAATCCATTAAAT
CTCCAAAGATTCTTCTAGTAGTTTCTTACAGCTCAGAGATGAAGAATCACTATTCAAAACTTTTTCCCCCCTAA

mRNA sequence

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Protein sequence

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MRARRDAKKLAKKIAKGNCHMIKQGSTWITTSGKEIFADYPLEEESYFPHPVVPTIKMVSSPYKTIDEDKVSKAGVREIKNIQHQLNYSNKVLTTLSQSVEKMKEQRVNT
DTSTKEIPKIDPNRPIFQPNTFPIGRLRDNSEELLAEINKKLSIFKIEEGESSKKANTPKGVNSIKNAIKSIKSPKILLVVSYSSEMKNHYSKLFPP

Lsi08G002750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome