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Lsi08G002910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBnaC09g30100D protein
Genome locationchr08:7637292..7637663
RNA-Seq ExpressionLsi08G002910
SyntenyLsi08G002910
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4272014.1 unnamed protein product [Prunus armeniaca]1.0e-53100Show/hide
Query:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
        MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
Subjt:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD

Query:  ESRP
        ESRP
Subjt:  ESRP

KAG5070521.1 hypothetical protein JHK85_002898 [Glycine max]8.3e-5196.15Show/hide
Query:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
        MRTTCTWTERPYEASLFPGIGFG FLRSLGG +RRPPSGGARAIRPTG+GTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
Subjt:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD

Query:  ESRP
        ESRP
Subjt:  ESRP

KAG5107065.1 hypothetical protein JHK82_044035 [Glycine max]1.6e-4996.08Show/hide
Query:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
        MRTTCTWTERPYEASLFPGIGFG FLRSLGG +RRPPSGGARAIRPTG+GTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
Subjt:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD

Query:  ES
        ES
Subjt:  ES

OVA00002.1 hypothetical protein BVC80_8595g9 [Macleaya cordata]3.4e-5297.17Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEA LFPGIGFGPFLRSLGG RRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDES
        SSRDES
Subjt:  SSRDES

RDY14311.1 hypothetical protein CR513_00630, partial [Mucuna pruriens]2.3e-5397.22Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEASLFPGIGFG FLRSLGG +RRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDESRP
        SSRDESRP
Subjt:  SSRDESRP

TrEMBL top hitse value%identityAlignment
A0A200PP66 Uncharacterized protein1.6e-5297.17Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEA LFPGIGFGPFLRSLGG RRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDES
        SSRDES
Subjt:  SSRDES

A0A371IGY9 Uncharacterized protein (Fragment)1.1e-5397.22Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEASLFPGIGFG FLRSLGG +RRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDESRP
        SSRDESRP
Subjt:  SSRDESRP

A0A6D2HCM6 Uncharacterized protein1.2e-4284.26Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEASLFPGIGFG FLRSLG               PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDESRP
        SSRDESRP
Subjt:  SSRDESRP

A0A6J5U9F4 Uncharacterized protein5.0e-54100Show/hide
Query:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
        MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD
Subjt:  MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRD

Query:  ESRP
        ESRP
Subjt:  ESRP

A0A7G2FKR6 Uncharacterized protein ycf681.2e-4284.26Show/hide
Query:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP
        MSVKMRTTCTWTERPYEASLFPGIGFG FLRSLG               PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHP
Subjt:  MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP

Query:  SSRDESRP
        SSRDESRP
Subjt:  SSRDESRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCG
AAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCG
TGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCG
AAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCG
TGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG
Protein sequenceShow/hide protein sequence
MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDESRP