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Lsi08G002920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSignal anchor, putative
Genome locationchr08:7637662..7637850
RNA-Seq ExpressionLsi08G002920
SyntenyLsi08G002920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4272015.1 unnamed protein product [Prunus armeniaca]8.2e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
KAD4180223.1 hypothetical protein E3N88_28814 [Mikania micrantha]8.2e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
KAG4204298.1 hypothetical protein ERO13_A04G039240v2 [Gossypium hirsutum]8.2e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
KAG5070516.1 hypothetical protein JHK85_002893 [Glycine max]8.2e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
KAG9455513.1 hypothetical protein H6P81_000021 [Aristolochia fimbriata]8.2e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
TrEMBL top hitse value%identityAlignment
A0A072UJ16 Signal anchor, putative4.0e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
A0A2N9HR91 Uncharacterized protein4.0e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
A0A2N9I3B0 Uncharacterized protein4.0e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
A0A2N9I7K2 Uncharacterized protein4.0e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
A0A6J5XMM5 Uncharacterized protein4.0e-19100Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
SwissProt top hitse value%identityAlignment
Q3BAI2 Uncharacterized protein ORF911.8e-2197.96Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV+VTAAVHRGFGRRL
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGT
TACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCGAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGT
TACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCGAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAA
Protein sequenceShow/hide protein sequence
MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLRRRRAKQTKHAQK