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Lsi08G002940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G002940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:7725127..7728978
RNA-Seq ExpressionLsi08G002940
SyntenyLsi08G002940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876469.1 uncharacterized protein LOC120068893 [Benincasa hispida]1.2e-0940.48Show/hide
Query:  TRITLTPLVRSDRERHYRGTRVEERPVYEPTDVETSLL---------DAHSQSSDDESEEHQSHEPKLQEH-LPEPPIVDHDTHPPHNE-HMSPPLSPLP
        TRI   PL+ SDRER YR TRV+ERPVY+  D ET+ +         D HS  +D ES EH +H+P+L EH   E PI +H+ HP  N+ H  P    +P
Subjt:  TRITLTPLVRSDRERHYRGTRVEERPVYEPTDVETSLL---------DAHSQSSDDESEEHQSHEPKLQEH-LPEPPIVDHDTHPPHNE-HMSPPLSPLP

Query:  REPTRGVGIHSSLHDIDYRVSMVEHK
            +G    +++H    RV    H+
Subjt:  REPTRGVGIHSSLHDIDYRVSMVEHK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAAGGATCACACTCACCCCACTAGTCAGGTCGGATAGGGAGAGGCATTATAGGGGCACTAGGGTTGAGGAACGACCTGTGTATGAGCCCACTGATGTTGAGACGAGCTT
ATTAGATGCACATAGTCAATCCAGTGACGACGAGAGTGAGGAGCATCAATCACACGAGCCTAAGCTCCAGGAGCATTTGCCAGAACCCCCCATTGTTGATCATGACACTC
ACCCTCCACATAATGAGCATATGTCACCTCCGCTGAGCCCATTACCTCGAGAACCCACAAGGGGTGTGGGGATTCATAGCTCACTCCACGACATAGATTATAGAGTGTCG
ATGGTGGAGCATAAGCTGGATGATCGAGCAGACCCACCTGCCGTCTTCGCCGTTGCCGCTCAAAACTTGTCCTCCATCCGCCATAAATGCACACCTTCGATTGCCGATGT
CGCTTTATTTTCCGCTTGCCGCCAAGATGTGACCCACACACGAATGGGGCTGCCGACCATCGTTAGCAGTGTTCTAACAACCTACACTCATGAGCAGCAACAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ACAAGGATCACACTCACCCCACTAGTCAGGTCGGATAGGGAGAGGCATTATAGGGGCACTAGGGTTGAGGAACGACCTGTGTATGAGCCCACTGATGTTGAGACGAGCTT
ATTAGATGCACATAGTCAATCCAGTGACGACGAGAGTGAGGAGCATCAATCACACGAGCCTAAGCTCCAGGAGCATTTGCCAGAACCCCCCATTGTTGATCATGACACTC
ACCCTCCACATAATGAGCATATGTCACCTCCGCTGAGCCCATTACCTCGAGAACCCACAAGGGGTGTGGGGATTCATAGCTCACTCCACGACATAGATTATAGAGTGTCG
ATGGTGGAGCATAAGCTGGATGATCGAGCAGACCCACCTGCCGTCTTCGCCGTTGCCGCTCAAAACTTGTCCTCCATCCGCCATAAATGCACACCTTCGATTGCCGATGT
CGCTTTATTTTCCGCTTGCCGCCAAGATGTGACCCACACACGAATGGGGCTGCCGACCATCGTTAGCAGTGTTCTAACAACCTACACTCATGAGCAGCAACAACTTTGA
Protein sequenceShow/hide protein sequence
TRITLTPLVRSDRERHYRGTRVEERPVYEPTDVETSLLDAHSQSSDDESEEHQSHEPKLQEHLPEPPIVDHDTHPPHNEHMSPPLSPLPREPTRGVGIHSSLHDIDYRVS
MVEHKLDDRADPPAVFAVAAQNLSSIRHKCTPSIADVALFSACRQDVTHTRMGLPTIVSSVLTTYTHEQQQL