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Lsi08G003000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:7922865..7923230
RNA-Seq ExpressionLsi08G003000
SyntenyLsi08G003000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646628.1 hypothetical protein Csa_023588, partial [Cucumis sativus]5.5e-1171.43Show/hide
Query:  ERGGDGGVGVKKRLMTSKAICNHSIHSDFPSLGEIEVIDINQEKKSLRIHNQKRKK
        ERGGDG  G KKRLM +KAICN SI+ DFPSLG+ EV +INQ+KKSLRI++QK KK
Subjt:  ERGGDGGVGVKKRLMTSKAICNHSIHSDFPSLGEIEVIDINQEKKSLRIHNQKRKK
TrEMBL top hitse value%identityAlignment
A0A0A0K8H8 Uncharacterized protein9.5e-0971.15Show/hide
Query:  DGGVGVKKRLMTSKAICNHSIHSDFPSLGEIEVIDINQEKKSLRIHNQKRKK
        DGG G KKRLM +KAICN SI+ DFPSLG+ EV +INQ+KKSLRI++QK KK
Subjt:  DGGVGVKKRLMTSKAICNHSIHSDFPSLGEIEVIDINQEKKSLRIHNQKRKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGATTGAATGAAAGAGGAGGTGATGGTGGAGTTGGAGTTAAGAAAAGGCTAATGACGAGCAAAGCCATCTGCAACCATTCAATTCATAGTGATTTTCCATCATT
GGGCGAAATTGAAGTTATTGATATCAATCAAGAGAAGAAAAGCCTAAGAATTCACAACCAGAAGAGGAAGAAGATGGCAAAGGAAGAAGAATCAGGGCACAGAAGCATAC
CGAGGATTTTATATAGACCTCTGAAGTTCAGGACCTGGTATGGATTTCCCCGAGAACTGAGTCAGGCAGCACTGAAATCTGTTGAGAGCCCCAAGCATCGTAGAATGCAA
CTAAAGGCCCAATTCATAGTTATGGACCGCGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGATTGAATGAAAGAGGAGGTGATGGTGGAGTTGGAGTTAAGAAAAGGCTAATGACGAGCAAAGCCATCTGCAACCATTCAATTCATAGTGATTTTCCATCATT
GGGCGAAATTGAAGTTATTGATATCAATCAAGAGAAGAAAAGCCTAAGAATTCACAACCAGAAGAGGAAGAAGATGGCAAAGGAAGAAGAATCAGGGCACAGAAGCATAC
CGAGGATTTTATATAGACCTCTGAAGTTCAGGACCTGGTATGGATTTCCCCGAGAACTGAGTCAGGCAGCACTGAAATCTGTTGAGAGCCCCAAGCATCGTAGAATGCAA
CTAAAGGCCCAATTCATAGTTATGGACCGCGCCTGA
Protein sequenceShow/hide protein sequence
MYGLNERGGDGGVGVKKRLMTSKAICNHSIHSDFPSLGEIEVIDINQEKKSLRIHNQKRKKMAKEEESGHRSIPRILYRPLKFRTWYGFPRELSQAALKSVESPKHRRMQ
LKAQFIVMDRA