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Lsi08G003120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpimerase domain-containing protein
Genome locationchr08:8204943..8207896
RNA-Seq ExpressionLsi08G003120
SyntenyLsi08G003120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4920821.1 hypothetical protein JHK86_049634 [Glycine max]9.2e-0647.95Show/hide
Query:  ELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSFL
        EL+S+R VVEG E   E  D+EVR++SE+G +E R R+   ELGE +GD++   E +GD VGEA +A  S+ +
Subjt:  ELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSFL

KAG4935460.1 hypothetical protein JHK85_050379 [Glycine max]9.2e-0647.95Show/hide
Query:  ELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSFL
        EL+S+R VVEG E   E  D+EVR++SE+G +E R R+   ELGE +GD++   E +GD VGEA +A  S+ +
Subjt:  ELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSFL

PON55722.1 hypothetical protein PanWU01x14_186740, partial [Parasponia andersonii]6.8e-1748.09Show/hide
Query:  HIHLTAAPSQGARRKPIRNSGDKVVAKRSIAVNFSDVTEVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGRE
        H HLTAAPSQG  R+PIRN  D+    R          E  ++I +LA +  VVEG E GDE  D E R++ EEGAEE  L +  GEL E +GDV     
Subjt:  HIHLTAAPSQGARRKPIRNSGDKVVAKRSIAVNFSDVTEVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGRE

Query:  GIGDEVGEAEKANRSSFLRVEAERRWVAMGA
         +GDEVGEAE+AN ++ L VE +R  VA+ A
Subjt:  GIGDEVGEAEKANRSSFLRVEAERRWVAMGA

PON95526.1 hypothetical protein TorRG33x02_086720 [Trema orientale]5.1e-0448.53Show/hide
Query:  EVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEV
        E  ++I +LA +  VVEG E GDE  D E R++ EEGAEE  L +  GEL E +GDV      +GDEV
Subjt:  EVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEV

THG02007.1 hypothetical protein TEA_002573 [Camellia sinensis var. sinensis]2.1e-0550.88Show/hide
Query:  DEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSF
        D+G D EVR+K EE ++E RLR  + EL E +GD++C R  +GDE+GE E+A+R++F
Subjt:  DEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSF

TrEMBL top hitse value%identityAlignment
A0A2P5C3T5 Uncharacterized protein (Fragment)3.3e-1748.09Show/hide
Query:  HIHLTAAPSQGARRKPIRNSGDKVVAKRSIAVNFSDVTEVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGRE
        H HLTAAPSQG  R+PIRN  D+    R          E  ++I +LA +  VVEG E GDE  D E R++ EEGAEE  L +  GEL E +GDV     
Subjt:  HIHLTAAPSQGARRKPIRNSGDKVVAKRSIAVNFSDVTEVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGRE

Query:  GIGDEVGEAEKANRSSFLRVEAERRWVAMGA
         +GDEVGEAE+AN ++ L VE +R  VA+ A
Subjt:  GIGDEVGEAEKANRSSFLRVEAERRWVAMGA

A0A2P5FCN1 Uncharacterized protein2.5e-0448.53Show/hide
Query:  EVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEV
        E  ++I +LA +  VVEG E GDE  D E R++ EEGAEE  L +  GEL E +GDV      +GDEV
Subjt:  EVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEV

A0A4V3WKS8 Epimerase domain-containing protein1.0e-0550.88Show/hide
Query:  DEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSF
        D+G D EVR+K EE ++E RLR  + EL E +GD++C R  +GDE+GE E+A+R++F
Subjt:  DEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGIGDEVGEAEKANRSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCCAGATAGTAAGCCACTTTTGCTGACAAGAATATACTGTTCCAGAGATGCTAAAACCATCTTCTCATCAGCAAGTCTGGCAAACAGAAACAGTAAATCAAC
TGGATCAGATGGCAGAAACGATATAGCTTCTCTAATGCATTGTCCAGAATCAATTCCGAAGACGACATCCACCAGAGAACTGAGCATTAGATACACTCTCCATTTCAGCT
TTTCAGAAGGAAATGAGCCTAGACATCTAAAAGAGAAACTGAACCAACAAGCAGATAGAAGTGTGTTTGCAAAATCTATGGTCCTGATGTCGGGATCTTGGAGCAAAATC
GAATGTAAAGTTTCCAATACCCCCAAGACAAGTTCCTCTTCAATTACATTGATAGTTGCTAAAAGCCAAGTTTTTCATTTCTTTGGCGACGGAGTCATCCATGACAATAT
TGACTTGACTATATACATAGAACTCCTTGAGAAGGTTGTTGCAAATGCGTCTGGATGTATGCCCATCTCCCCAGTCACATTCTTACGGAGCATACTCGTCAAATTAAGAA
CTAGTTCTTCAATAACAAAGAGGATCTCTCCCCGTATCTCCTCGCTGCATATGAAGATTAATTCAGAACTTGTCGTAAAATGCATTTGCCTCTTTCGAATTATTCAGTTT
ATCACCTTGAACAAACAAGATTACCATATACACTTGACGGCGGCTCCAAGCCAAGGCGCCAGAAGAAAGCCGATCCGAAACTCTGGCGATAAAGTCGTCGCAAAGAGATC
CATCGCCGTCAACTTCAGTGACGTCACAGAGGTGGCGAACAAGATCAGTGAGTTGGCGAGCAATCGGGTGGTCGTCGAAGGAGCAGAGTGCGGTGACGAAGGGAGCGACA
ATGAAGTGAGAATGAAAAGTGAGGAAGGTGCGGAGGAATGGCGGCTGAGAAAGAGCCTGGGAGAACTGGGAGAGTGCATAGGAGACGTGAACTGTGGGAGAGAGGGGATC
GGAGATGAGGTTGGAGAAGCAGAGAAGGCAAATCGTTCCTCCTTCCTGCGTGTGGAGGCAGAGCGACGATGGGTGGCCATGGGAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCCAGATAGTAAGCCACTTTTGCTGACAAGAATATACTGTTCCAGAGATGCTAAAACCATCTTCTCATCAGCAAGTCTGGCAAACAGAAACAGTAAATCAAC
TGGATCAGATGGCAGAAACGATATAGCTTCTCTAATGCATTGTCCAGAATCAATTCCGAAGACGACATCCACCAGAGAACTGAGCATTAGATACACTCTCCATTTCAGCT
TTTCAGAAGGAAATGAGCCTAGACATCTAAAAGAGAAACTGAACCAACAAGCAGATAGAAGTGTGTTTGCAAAATCTATGGTCCTGATGTCGGGATCTTGGAGCAAAATC
GAATGTAAAGTTTCCAATACCCCCAAGACAAGTTCCTCTTCAATTACATTGATAGTTGCTAAAAGCCAAGTTTTTCATTTCTTTGGCGACGGAGTCATCCATGACAATAT
TGACTTGACTATATACATAGAACTCCTTGAGAAGGTTGTTGCAAATGCGTCTGGATGTATGCCCATCTCCCCAGTCACATTCTTACGGAGCATACTCGTCAAATTAAGAA
CTAGTTCTTCAATAACAAAGAGGATCTCTCCCCGTATCTCCTCGCTGCATATGAAGATTAATTCAGAACTTGTCGTAAAATGCATTTGCCTCTTTCGAATTATTCAGTTT
ATCACCTTGAACAAACAAGATTACCATATACACTTGACGGCGGCTCCAAGCCAAGGCGCCAGAAGAAAGCCGATCCGAAACTCTGGCGATAAAGTCGTCGCAAAGAGATC
CATCGCCGTCAACTTCAGTGACGTCACAGAGGTGGCGAACAAGATCAGTGAGTTGGCGAGCAATCGGGTGGTCGTCGAAGGAGCAGAGTGCGGTGACGAAGGGAGCGACA
ATGAAGTGAGAATGAAAAGTGAGGAAGGTGCGGAGGAATGGCGGCTGAGAAAGAGCCTGGGAGAACTGGGAGAGTGCATAGGAGACGTGAACTGTGGGAGAGAGGGGATC
GGAGATGAGGTTGGAGAAGCAGAGAAGGCAAATCGTTCCTCCTTCCTGCGTGTGGAGGCAGAGCGACGATGGGTGGCCATGGGAGCATGA
Protein sequenceShow/hide protein sequence
MMDPDSKPLLLTRIYCSRDAKTIFSSASLANRNSKSTGSDGRNDIASLMHCPESIPKTTSTRELSIRYTLHFSFSEGNEPRHLKEKLNQQADRSVFAKSMVLMSGSWSKI
ECKVSNTPKTSSSSITLIVAKSQVFHFFGDGVIHDNIDLTIYIELLEKVVANASGCMPISPVTFLRSILVKLRTSSSITKRISPRISSLHMKINSELVVKCICLFRIIQF
ITLNKQDYHIHLTAAPSQGARRKPIRNSGDKVVAKRSIAVNFSDVTEVANKISELASNRVVVEGAECGDEGSDNEVRMKSEEGAEEWRLRKSLGELGECIGDVNCGREGI
GDEVGEAEKANRSSFLRVEAERRWVAMGA