; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G003300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWW domain-containing protein
Genome locationchr08:8927443..8927748
RNA-Seq ExpressionLsi08G003300
SyntenyLsi08G003300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013878.1 hypothetical protein SDJN02_24047 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-1965.56Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        +L ME P LSLAPT   F+K+D++NSSS KL +   N+ CSRKRKLLLH HH   H I SQTSVDLQLKDPLPLDWEQCLDLQ   ++ L
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

XP_011656507.1 uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus]7.8e-2778.02Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLLFFI
        MLDME PELSLAPT Q FVKSDEMNSSS K LVEIS+   CSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPL WEQCLDLQ++    ++++
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLLFFI

XP_011656508.1 uncharacterized protein LOC105435750 isoform X2 [Cucumis sativus]2.3e-2681.82Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        MLDME PELSLAPT Q FVKSDEMNSSS K LVEIS+   CSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPL WEQCLDLQ   ++ L
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

XP_038886190.1 uncharacterized protein LOC120076436 isoform X1 [Benincasa hispida]1.6e-2776.67Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLLFFI
        +LDME+PELSLAPTTQ FVK DEMNSSSKKLVEISN   CSRKRKLL HDH H+IKSQTSVDLQLKDPLPL WEQCLDLQ++    ++++
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLLFFI

XP_038886191.1 uncharacterized protein LOC120076436 isoform X2 [Benincasa hispida]4.6e-2780.46Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        +LDME+PELSLAPTTQ FVK DEMNSSSKKLVEISN   CSRKRKLL HDH H+IKSQTSVDLQLKDPLPL WEQCLDLQ   ++ L
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

TrEMBL top hitse value%identityAlignment
A0A0A0K842 WW domain-containing protein1.1e-2681.82Show/hide
Query:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        MLDME PELSLAPT Q FVKSDEMNSSS K LVEIS+   CSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPL WEQCLDLQ   ++ L
Subjt:  MLDMEIPELSLAPTTQLFVKSDEMNSSSKK-LVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

A0A5E4G781 PREDICTED: vesicle transport1.4e-1052.22Show/hide
Query:  LDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKS----QTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        L ME+PELSLAPT    V    +N S+  L    +N   SRKRKL     H  +K+    QTSVDLQLKDPLPLDWEQCLDL+   ++ L
Subjt:  LDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKS----QTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

A0A6J1D9E4 uncharacterized protein LOC1110185819.0e-1356.67Show/hide
Query:  MEIPELSLAPTTQLFVKSDE-----MNSSSKKLVEISNNNPCSRKRKLL-LHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        ME+PELSLAPT  + +  D+     M+SS +KLVE   +  CS+KRKLL LHDH      + SVDLQLKDPLPLDWEQCLDLQ   ++ L
Subjt:  MEIPELSLAPTTQLFVKSDE-----MNSSSKKLVEISNNNPCSRKRKLL-LHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

A0A6J1EVH5 uncharacterized protein LOC1114363473.8e-1966.67Show/hide
Query:  MEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        ME P LSLAPT   F+K+D++NSSS KL +   N+ CSRKRKLLLH HH   H I SQTSVDLQLKDPLPLDWEQCLDLQ   ++ L
Subjt:  MEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

A0A6J1JVM3 uncharacterized protein LOC1114887253.8e-1966.67Show/hide
Query:  MEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL
        M+ P LSLAPT   F+KSD++NSSS KL +   N+ CSRKRKLLLH HH   H I SQTSVDLQLKDPLPLDWEQCLDLQ   ++ L
Subjt:  MEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHH---HFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATATGGAAATTCCTGAGTTGTCATTGGCTCCAACAACCCAGCTGTTTGTGAAAAGTGATGAGATGAATTCTTCATCAAAAAAATTAGTAGAAATTAGCAACAA
TAACCCATGTTCAAGGAAGAGGAAGCTTCTTCTCCATGATCATCATCACTTTATTAAGTCTCAAACAAGTGTTGATCTTCAACTCAAAGATCCTCTTCCTCTTGATTGGG
AGCAATGTCTTGATCTTCAGGTTCTCTCTCTTCATCTTCTTTTTTTTATTTGTAACGACGTTACTAATGTCTTGACGGTTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATATGGAAATTCCTGAGTTGTCATTGGCTCCAACAACCCAGCTGTTTGTGAAAAGTGATGAGATGAATTCTTCATCAAAAAAATTAGTAGAAATTAGCAACAA
TAACCCATGTTCAAGGAAGAGGAAGCTTCTTCTCCATGATCATCATCACTTTATTAAGTCTCAAACAAGTGTTGATCTTCAACTCAAAGATCCTCTTCCTCTTGATTGGG
AGCAATGTCTTGATCTTCAGGTTCTCTCTCTTCATCTTCTTTTTTTTATTTGTAACGACGTTACTAATGTCTTGACGGTTAAGTAG
Protein sequenceShow/hide protein sequence
MLDMEIPELSLAPTTQLFVKSDEMNSSSKKLVEISNNNPCSRKRKLLLHDHHHFIKSQTSVDLQLKDPLPLDWEQCLDLQVLSLHLLFFICNDVTNVLTVK