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Lsi08G003310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWW domain-containing protein
Genome locationchr08:8928281..8928995
RNA-Seq ExpressionLsi08G003310
SyntenyLsi08G003310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013878.1 hypothetical protein SDJN02_24047 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4282.64Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPKE+HHN     ++KLDLELELNNI+SSSS  A++LMNFRHG+GSS+S+SS NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNS-PPNTLPLLN
        TLFP PSSPNS PPNTL LLN
Subjt:  TLFPNPSSPNS-PPNTLPLLN

XP_011656507.1 uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus]2.1e-4280.17Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPK++ H + Q H+QKLDL LELNNINS SS  A NLMNF H HG+ +   S+NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPN-PSSPNSPPNTLPLLN
        TLFPN PSSPNSPPNTLPLLN
Subjt:  TLFPN-PSSPNSPPNTLPLLN

XP_022992410.1 uncharacterized protein LOC111488725 [Cucurbita maxima]8.5e-4483.33Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPKE+HHN     ++KLDLELELNNI+SSSS  A++LMNFRHG+GSS+S+SS NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNSPPNTLPLLN
        TLFP PSSPNSPPNTL LLN
Subjt:  TLFPNPSSPNSPPNTLPLLN

XP_038886190.1 uncharacterized protein LOC120076436 isoform X1 [Benincasa hispida]7.2e-4380Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPK+E       H+QKL+LELELNNINS+SS+T  NLMN R  H SS+S  S+NMVALPC+NCHLLVILSKSSPSCPNCKHLH
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNSPPNTLPLLN
        TLF NPSSPNSPPNTLPLLN
Subjt:  TLFPNPSSPNSPPNTLPLLN

XP_038886191.1 uncharacterized protein LOC120076436 isoform X2 [Benincasa hispida]7.2e-4380Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPK+E       H+QKL+LELELNNINS+SS+T  NLMN R  H SS+S  S+NMVALPC+NCHLLVILSKSSPSCPNCKHLH
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNSPPNTLPLLN
        TLF NPSSPNSPPNTLPLLN
Subjt:  TLFPNPSSPNSPPNTLPLLN

TrEMBL top hitse value%identityAlignment
A0A0A0K842 WW domain-containing protein1.0e-4280.17Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPK++ H + Q H+QKLDL LELNNINS SS  A NLMNF H HG+ +   S+NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPN-PSSPNSPPNTLPLLN
        TLFPN PSSPNSPPNTLPLLN
Subjt:  TLFPN-PSSPNSPPNTLPLLN

A0A5C7IUY9 WW domain-containing protein1.0e-2356.15Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSS----NTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNC
        SG+MYY+NRKTLRKSWNWP        + + QKLDLEL +++  S+SS    +  H+  + +H H  S+S ++NNMVAL CLNCHLLVILSKSSPSCPNC
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSS----NTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNC

Query:  KHLH---TLFPNP----SSPNSPPNTLPLL
        K++H   TL   P    S+PNS PNTL LL
Subjt:  KHLH---TLFPNP----SSPNSPPNTLPLL

A0A6J1D9E4 uncharacterized protein LOC1110185812.6e-3875.4Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNT--AHNLM-NFRHG--HGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPN
        SGKMYYLNRKTLRKSWNWPKE++      H+QKL+LELELNNINSSSS++  A NLM NFRHG  HG     SS+NMVALPCLNCHLLVILSKSSPSCPN
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNT--AHNLM-NFRHG--HGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPN

Query:  CKHLHTLFP-NPSSPNSPPNTLPLLN
        CKH HTLFP + SS  +PPNTLPLLN
Subjt:  CKHLHTLFP-NPSSPNSPPNTLPLLN

A0A6J1EVH5 uncharacterized protein LOC1114363471.0e-4282.64Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPKE+HHN     ++KLDLELELNNI+SSSS  A++LMNFRHG+GSS+S+SS NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNS-PPNTLPLLN
        TLFP PSSPNS PPNTL LLN
Subjt:  TLFPNPSSPNS-PPNTLPLLN

A0A6J1JVM3 uncharacterized protein LOC1114887254.1e-4483.33Show/hide
Query:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH
        SGKMYYLNRKTLRKSWNWPKE+HHN     ++KLDLELELNNI+SSSS  A++LMNFRHG+GSS+S+SS NMVALPCLNCHLLVILSKSSPSCPNCKH H
Subjt:  SGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLH

Query:  TLFPNPSSPNSPPNTLPLLN
        TLFP PSSPNSPPNTL LLN
Subjt:  TLFPNPSSPNSPPNTLPLLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78170.1 unknown protein7.0e-0436.51Show/hide
Query:  FRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLHTLFPNPSSPNSPPNTLPLL
        F  G  +        MV   C+ CH+LV+L  S+P CPNCK +H    + +    P N L LL
Subjt:  FRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLHTLFPNPSSPNSPPNTLPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCAGGGAAAATGTACTATCTAAACAGAAAGACATTGAGGAAGAGTTGGAATTGGCCAAAAGAAGAACATCATAATTATCATCAACAACATAACCAAAAGCTAGA
CTTGGAGTTGGAGCTCAACAACATTAATTCTTCATCATCAAATACAGCTCATAATTTGATGAATTTCAGACATGGACATGGAAGTTCTAATTCAGAAAGCAGCAATAACA
TGGTGGCTTTGCCTTGTCTCAATTGCCACCTTCTTGTTATTCTCTCAAAATCTTCCCCATCTTGCCCTAATTGCAAGCATCTTCATACCCTTTTTCCAAACCCTTCTTCA
CCCAATTCCCCTCCCAACACCTTGCCCCTCTTGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCAGGGAAAATGTACTATCTAAACAGAAAGACATTGAGGAAGAGTTGGAATTGGCCAAAAGAAGAACATCATAATTATCATCAACAACATAACCAAAAGCTAGA
CTTGGAGTTGGAGCTCAACAACATTAATTCTTCATCATCAAATACAGCTCATAATTTGATGAATTTCAGACATGGACATGGAAGTTCTAATTCAGAAAGCAGCAATAACA
TGGTGGCTTTGCCTTGTCTCAATTGCCACCTTCTTGTTATTCTCTCAAAATCTTCCCCATCTTGCCCTAATTGCAAGCATCTTCATACCCTTTTTCCAAACCCTTCTTCA
CCCAATTCCCCTCCCAACACCTTGCCCCTCTTGAACTAGCTAGACACCATATGCAACGTCTCGACTCGACATGCATGGCACGTCTTGGGTTTAAAAGAGGATATATATAT
CGTTTGAGTTGGGTTGAATTGGGTTGGGTTGTATCGTATTTTATGATGACTGTAAAAAAGTTGGTGTAGAATGTTCTACGTTGTTTCTAGAAGCTAATTAAAAATTAGTC
TTTAAATTGTCGATTGACTCAAAAGCTTTGAATACAGGACCCCTCTGGACC
Protein sequenceShow/hide protein sequence
MLSGKMYYLNRKTLRKSWNWPKEEHHNYHQQHNQKLDLELELNNINSSSSNTAHNLMNFRHGHGSSNSESSNNMVALPCLNCHLLVILSKSSPSCPNCKHLHTLFPNPSS
PNSPPNTLPLLN