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Lsi08G003500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like protein 3
Genome locationchr08:9609595..9610297
RNA-Seq ExpressionLsi08G003500
SyntenyLsi08G003500
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50469.1 defensin-like protein 3 [Citrullus lanatus]2.4e-2275.36Show/hide
Query:  EGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        E WRKLT+VLFIFLSL+SGWMVAETE GR CYRP+PSF G CSSDEDC+ VCDG+C    G CIC VPC
Subjt:  EGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC

KAA0062794.1 defensin-like protein 3 [Cucumis melo var. makuwa]1.1e-1149.32Show/hide
Query:  WRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        W+KLT V F+FLS++SGWM+ ETE G+ C++ +PSF G C+S+++C+  CD      G C    GLCIC V C
Subjt:  WRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

KAA0062795.1 defensin-like protein 3 [Cucumis melo var. makuwa]1.0e-1765.28Show/hide
Query:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M  EG RKLTVVL I LS++SGWMVAETE GR C+RP P+  G CSSDEDC++VCDG+C  G+  C+C VPC
Subjt:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC

XP_031744629.1 defensin-1-like [Cucumis sativus]5.9e-2169.44Show/hide
Query:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M GEGWRKLTVVLFI LSL+SGWMVAETE GR CYRP+P   G CSS++DC++VCDG+C    G C+C VPC
Subjt:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC

XP_038887289.1 defensin-like protein 2 [Benincasa hispida]8.0e-1860.26Show/hide
Query:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        M GEGWRKLTVVLFIFL+L+SGWMV ETE G+TC++ +PSF G C+S+ +C+  CD      GYC    GLCIC V C
Subjt:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

TrEMBL top hitse value%identityAlignment
A0A0A0K447 Uncharacterized protein3.9e-1048Show/hide
Query:  GWRKLTVVLFIF-LSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVC------DGYCYPGRGLCICPVPC
        GW+KLT V FIF L+++SGWM+ ET AG+ C++ + SF G C S+++C+  C      DG+C    GLCIC V C
Subjt:  GWRKLTVVLFIF-LSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVC------DGYCYPGRGLCICPVPC

A0A5A7V3H5 Defensin-like protein 34.6e-1150.63Show/hide
Query:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVC-------DGYCYPGRGLCICPVPC
        M GEG RKLTVV+ IFL  +SGWMV +TE G TCY+P+ +F G C+S E+C  VC       DG+C   +  CIC   C
Subjt:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVC-------DGYCYPGRGLCICPVPC

A0A5D3BCI9 Defensin-like protein 35.4e-1249.32Show/hide
Query:  WRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        W+KLT V F+FLS++SGWM+ ETE G+ C++ +PSF G C+S+++C+  CD      G C    GLCIC V C
Subjt:  WRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

A0A5D3BEY4 Defensin-like protein 35.1e-1865.28Show/hide
Query:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M  EG RKLTVVL I LS++SGWMVAETE GR C+RP P+  G CSSDEDC++VCDG+C  G+  C+C VPC
Subjt:  MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC

W5RQN1 Defensin-like protein 31.2e-2275.36Show/hide
Query:  EGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        E WRKLT+VLFIFLSL+SGWMVAETE GR CYRP+PSF G CSSDEDC+ VCDG+C    G CIC VPC
Subjt:  EGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGAAGGATGGAGAAAGCTCACAGTTGTGTTGTTCATCTTCCTATCCCTTTCTTCTGGTTGGATGGTGGCAGAGACGGAAGCTGGAAGGACTTGCTATAGGCC
GAACCCGTCGTTCAACGGACATTGTAGTTCAGACGAAGATTGTCTTAGTGTTTGCGACGGATATTGCTACCCTGGCCGTGGTTTGTGCATATGTCCCGTGCCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
TGTGGTTGTTCATTCCCAAAAAAGGCTAGAGAAATAACCAAAAATTAGTTGAAGAAAACATCAGGAGGAAAGGAAATGAGGTATATATGTGAGAGCATATAAAAGGGGGT
ATTATATTGACTCCTAAAAGTTAAGGTACAGGAAAGATTAAAAAGAAATTAAAGAGATCATGGAGGGAGAAGGATGGAGAAAGCTCACAGTTGTGTTGTTCATCTTCCTA
TCCCTTTCTTCTGGTTGGATGGTGGCAGAGACGGAAGCTGGAAGGACTTGCTATAGGCCGAACCCGTCGTTCAACGGACATTGTAGTTCAGACGAAGATTGTCTTAGTGT
TTGCGACGGATATTGCTACCCTGGCCGTGGTTTGTGCATATGTCCCGTGCCTTGCTGACTCCTACTCTTATCTACTTTATCTTCTCTTAACTCTACTCTTATATGTGTAA
TATGTGCTATTTCTAGAAATTTTTTTTCCTTAAATAAGCTACTGCCTTCTAACTACTAAGATATATGCTGTACGCATGCACAACACATTATTAATCAATTGATCTCAACT
TATATATTTGCATTCTCGCATTACTTAC
Protein sequenceShow/hide protein sequence
MEGEGWRKLTVVLFIFLSLSSGWMVAETEAGRTCYRPNPSFNGHCSSDEDCLSVCDGYCYPGRGLCICPVPC