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Lsi08G003510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like protein 3
Genome locationchr08:9650050..9650620
RNA-Seq ExpressionLsi08G003510
SyntenyLsi08G003510
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50469.1 defensin-like protein 3 [Citrullus lanatus]2.7e-2173.91Show/hide
Query:  EGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        E WRKLT+VL IFLSL+SGWMVAETE GR CYRP+PSFK  CSSDEDC+ VCDG+C    G CIC VPC
Subjt:  EGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC

KAA0062794.1 defensin-like protein 3 [Cucumis melo var. makuwa]1.2e-1047.95Show/hide
Query:  WRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        W+KLT V  +FLS++SGWM+ ETE G+ C++ +PSFK  C+S+++C+  CD      G C    GLCIC V C
Subjt:  WRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

KAA0062795.1 defensin-like protein 3 [Cucumis melo var. makuwa]1.4e-1765.28Show/hide
Query:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M  EG RKLTVVL+I LS++SGWMVAETE GR C+RP P+ K  CSSDEDC++VCDG+C  G+  C+C VPC
Subjt:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC

XP_031744629.1 defensin-1-like [Cucumis sativus]6.6e-2068.06Show/hide
Query:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M GEGWRKLTVVL I LSL+SGWMVAETE GR CYRP+P  K  CSS++DC++VCDG+C    G C+C VPC
Subjt:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC

XP_038887289.1 defensin-like protein 2 [Benincasa hispida]2.0e-1657.69Show/hide
Query:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        M GEGWRKLTVVL IFL+L+SGWMV ETE G+TC++ +PSF+  C+S+ +C+  CD      GYC    GLCIC V C
Subjt:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

TrEMBL top hitse value%identityAlignment
A0A0A0K447 Uncharacterized protein4.3e-0946.67Show/hide
Query:  GWRKLTVVLLIF-LSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVC------DGYCYPGRGLCICPVPC
        GW+KLT V  IF L+++SGWM+ ET AG+ C++ + SFK  C S+++C+  C      DG+C    GLCIC V C
Subjt:  GWRKLTVVLLIF-LSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVC------DGYCYPGRGLCICPVPC

A0A5A7V3H5 Defensin-like protein 31.0e-1050.63Show/hide
Query:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVC-------DGYCYPGRGLCICPVPC
        M GEG RKLTVV+LIFL  +SGWMV +TE G TCY+P+ +F+  C+S E+C  VC       DG+C   +  CIC   C
Subjt:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVC-------DGYCYPGRGLCICPVPC

A0A5D3BCI9 Defensin-like protein 36.0e-1147.95Show/hide
Query:  WRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC
        W+KLT V  +FLS++SGWM+ ETE G+ C++ +PSFK  C+S+++C+  CD      G C    GLCIC V C
Subjt:  WRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCD------GYCYPGRGLCICPVPC

A0A5D3BEY4 Defensin-like protein 36.6e-1865.28Show/hide
Query:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        M  EG RKLTVVL+I LS++SGWMVAETE GR C+RP P+ K  CSSDEDC++VCDG+C  G+  C+C VPC
Subjt:  MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC

W5RQN1 Defensin-like protein 31.3e-2173.91Show/hide
Query:  EGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC
        E WRKLT+VL IFLSL+SGWMVAETE GR CYRP+PSFK  CSSDEDC+ VCDG+C    G CIC VPC
Subjt:  EGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGAAGGATGGAGAAAGCTCACAGTCGTGTTGCTCATCTTCCTATCCCTTTCTTCTGGTTGGATGGTGGCAGAGACGGAAGCTGGAAGGACTTGCTACAGGCC
GAACCCGTCGTTCAAGAGACATTGTAGTTCAGACGAAGATTGTCTTAGTGTTTGCGACGGATATTGCTACCCTGGCCGTGGTTTGTGCATATGTCCCGTGCCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAGGTGCAGAAGGATTAAAAAGAAATTAAAGAGATCATGGAGGGAGAAGGATGGAGAAAGCTCACAGTCGTGTTGCTCATCTTCCTATCCCTTTCTTCTGGTTGGAT
GGTGGCAGAGACGGAAGCTGGAAGGACTTGCTACAGGCCGAACCCGTCGTTCAAGAGACATTGTAGTTCAGACGAAGATTGTCTTAGTGTTTGCGACGGATATTGCTACC
CTGGCCGTGGTTTGTGCATATGTCCCGTGCCTTGCTGACTCCTACTCTTATGCTACTCCATCTTCTCTTAACTCTGCTCTTATATGTGTAATCTGTGTTATTTCTAGAAC
TTTTTTTTCCTTAAATAAGCTATTGCCTGCTAACTACTAAGATATACGCAGTACGCATGCACAACACATTATTAATCAATTGATCTCAACTTATATATTTGCATTCTCGC
ATTACTT
Protein sequenceShow/hide protein sequence
MEGEGWRKLTVVLLIFLSLSSGWMVAETEAGRTCYRPNPSFKRHCSSDEDCLSVCDGYCYPGRGLCICPVPC