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Lsi08G003700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:10149837..10153094
RNA-Seq ExpressionLsi08G003700
SyntenyLsi08G003700
Gene Ontology termsGO:0032367 - intracellular cholesterol transport (biological process)
GO:0005802 - trans-Golgi network (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649929.1 RAB11-binding protein RELCH homolog [Cucumis sativus]4.3e-0573.68Show/hide
Query:  KTKSWCSFFKKLLVEAIKEESHSVNQYTEIVDAVRFFC
        K +    F +KLLVE  KEESHSVNQYTEIVDAVRFFC
Subjt:  KTKSWCSFFKKLLVEAIKEESHSVNQYTEIVDAVRFFC
TrEMBL top hitse value%identityAlignment
A0A0A0LMV5 Uncharacterized protein2.1e-0573.68Show/hide
Query:  KTKSWCSFFKKLLVEAIKEESHSVNQYTEIVDAVRFFC
        K +    F +KLLVE  KEESHSVNQYTEIVDAVRFFC
Subjt:  KTKSWCSFFKKLLVEAIKEESHSVNQYTEIVDAVRFFC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCGATGAGTAGATCTCGACATGGAGCAGAAGGGGTCAAGACTTCAGATCTGGATGATGGCAGTGCTGAGTTTGAACAAGTAAAGACGAAGAGTTGGTGCAG
TTTTTTCAAGAAACTATTAGTTGAAGCGATCAAGGAGGAGAGTCACTCGGTAAATCAATATACTGAGATTGTAGATGCAGTCCGCTTCTTTTGCCGCATGCCATCCATGA
CCACCACATGCCTCTGCATGACCATCGCTAGCTTGCTCGCTGCCACCATCACACGTTCGTTCATCGCCACCAACGTTTCTCAAGCAATGGTTGGAGTTTGGGTGAGTTCT
CTTTGGGCCTTTCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
GGGGAAATGTCTTCAACACATTCCTTTATTGCCTCCTCGATCTACCCTCACATTCCCCTAGTCCCTCTCCTTTCTTCTCATCACTTTCTTTCTCTGATGCAATTCTCTCC
TTCAAATCTAGACAGTGAACAACAAAAATATTGACAAGAACCCACTGGAGATAGAGCACCGTGAGCAGATCTATCTTCTCCGTTAAGTAGATATGTCTTCTCCGATGAGT
AGATCTCGACATGGAGCAGAAGGGGTCAAGACTTCAGATCTGGATGATGGCAGTGCTGAGTTTGAACAAGTAAAGACGAAGAGTTGGTGCAGTTTTTTCAAGAAACTATT
AGTTGAAGCGATCAAGGAGGAGAGTCACTCGGTAAATCAATATACTGAGATTGTAGATGCAGTCCGCTTCTTTTGCCGCATGCCATCCATGACCACCACATGCCTCTGCA
TGACCATCGCTAGCTTGCTCGCTGCCACCATCACACGTTCGTTCATCGCCACCAACGTTTCTCAAGCAATGGTTGGAGTTTGGGTGAGTTCTCTTTGGGCCTTTCTTGAA
TGA
Protein sequenceShow/hide protein sequence
MSSPMSRSRHGAEGVKTSDLDDGSAEFEQVKTKSWCSFFKKLLVEAIKEESHSVNQYTEIVDAVRFFCRMPSMTTTCLCMTIASLLAATITRSFIATNVSQAMVGVWVSS
LWAFLE