CuGenDBv2

Gene ID	Lsi08G003790
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	cytochrome c oxidase subunit 3
Genome location	chr08:10436881..10440161
RNA-Seq Expression	Lsi08G003790
Synteny	Lsi08G003790
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR033945 - Cytochrome c oxidase subunit III domain IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAB5511295.1 hypothetical protein DKX38_030090 [Salix brachista]

4.5e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

KAE9584275.1 putative cytochrome-c oxidase [Lupinus albus]

4.5e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

KAF1856918.1 hypothetical protein Lal_00002101 [Lupinus albus]

1.5e-32

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVEIVGHHTAHQLHLPLWEARSG
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV  V    AH       E+++G
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVEIVGHHTAHQLHLPLWEARSG

KAG6736860.1 hypothetical protein POTOM_060257 [Populus tomentosa]

4.5e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

KEH16856.1 cytochrome C oxidase subunit 3 [Medicago truncatula]

5.9e-32

95.71

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

TrEMBL top hits

e value

%identity

Alignment

A0A5N5J0D5 Cytochrome c oxidase subunit 3

2.2e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

A0A6A4MVS0 Cytochrome c oxidase subunit 3

2.2e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

A0A6A5LA16 Cytochrome c oxidase subunit 3

7.5e-33

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVEIVGHHTAHQLHLPLWEARSG
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV  V    AH       E+++G
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVEIVGHHTAHQLHLPLWEARSG

A0A6N2KUH8 Cytochrome c oxidase subunit 3

2.2e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

A0A6N2MSX5 Cytochrome c oxidase subunit 3

2.2e-32

97.14

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVE

SwissProt top hits

e value

%identity

Alignment

P14852 Cytochrome c oxidase subunit 3

7.2e-33

92.75

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAP TISDSIYGSTFFLAT FHGFHVIIG+LFLI+CGIRQYLGHLTK+HHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

P14853 Cytochrome c oxidase subunit 3

2.2e-34

97.1

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

P32808 Cytochrome c oxidase subunit 3

1.2e-32

92.75

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAP TISDSIYGSTFFLAT FHGFHVIIG+LF I+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

P92514 Cytochrome c oxidase subunit 3

2.2e-34

97.1

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

Q03227 Cytochrome c oxidase subunit 3

3.2e-33

94.2

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLG +TKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

1.6e-35

97.1

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

ATMG00730.1 cytochrome c oxidase subunit 3

1.6e-35

97.1

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Query:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
        MEYYQAPFTISDSIYGSTFFLAT FHGFHVIIG+LFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV
Subjt:  MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDV

Sequences

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CDS sequence

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ATGGAATATTATCAAGCACCCTTCACTATTTCAGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTGACTTTCATGGTTTTCATGTGATTATAGGTAGTCTTTTCTT
GATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGAGATAGTTGGCC
ATCATACAGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGAAGCTTTTGAACCTAGCAAAAAGGACTTTCAACCTTTGCGCAAGAAAACAAAGTCG
AAGCTTTGCCAGAAGCAAGACGAGGAAGCAGAGTTGTCGTATAAATGGTAG

mRNA sequence

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Protein sequence

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MEYYQAPFTISDSIYGSTFFLATDFHGFHVIIGSLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVEIVGHHTAHQLHLPLWEARSGQEAFEPSKKDFQPLRKKTKS
KLCQKQDEEAELSYKW

Lsi08G003790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome